mRNA_H-elongata_contig5744.13212.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5744.13212.1
Unique NamemRNA_H-elongata_contig5744.13212.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 6.740e-100
Identity = 168/320 (52.50%), Postives = 194/320 (60.62%), Query Frame = 1
Query:    1 QVVADRNAGMLAGPGGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRV----------------RPMAVVSAKYYFNGDATVVFRYRLYSFHACQENRRGQKGEVEMRLWRLIPSVEKRLRAEGYDLTNFEWFSGSRGGR--GNMDESGGNGVPSDAVR----VAEQMLGCEIYWSPDEDW--DFTDLEGAANGTGSEEERMARVVCVSEGKDPAEGR-QAFVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGDFVYGNQRGVPYKMRRVLVPGPLEWTLGREWRTEDLYAEKMSAI 885
            QVVADR AGM  GPGGGHEHIHCSL++L+ A+VP Q+                                  RP+AVV+AKYYFNGD+ VVFRYRLYSFHAC  N  G +GE  MRLWRL+P VE RLRA  YDLT+F W       R      ++  N   S   R    V E+M GCEIYW   +    D   + G  +G G ++     V     G+D A G  ++FVGLM +D  GTW+ SQ VDGLEILVKDD+RL  D LWVNDRGFDR G+FVYGNQR VPYKMRRV   GPLEWTLG   RTE  YAEKMSAI
Sbjct:   75 QVVADRKAGMTPGPGGGHEHIHCSLKQLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRANSYDLTSFSWSDDDSNQREPSRGSDNASNDRCSKEGRTGNDVVERMFGCEIYWGRHQAGGEDEKSMPGGISGPGKQDANGGAVPERGAGEDAAGGGGKSFVGLMGKDDSGTWVESQNVDGLEILVKDDLRLWPDSLWVNDRGFDRDGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAEKMSAI 394          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: D7G1T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T3_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.140e-43
Identity = 79/126 (62.70%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  511 LEGAANGTGSEEERMARVVCVSEGKDPAEGR-QAFVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGDFVYGNQRGVPYKMRRVLVPGPLEWTLGREWRTEDLYAEKMSAI 885
            + G  +G G ++     V     G+D A G  ++FVGLM ED  GTW+ SQ VDGLEILVKDD+RL  DRLWVNDRGFDR+G+FVYGNQR VPYKMRRV   GPLEWTLG   RTE  YAE+MSAI
Sbjct:    1 MPGGISGPGKQDTDGGAVPERGAGEDAAGGGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAERMSAI 126          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC)

HSP 1 Score: 134 bits (337), Expect = 5.580e-33
Identity = 107/332 (32.23%), Postives = 148/332 (44.58%), Query Frame = 1
Query:    1 QVVADRNAGMLAGPGGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRVRPMAVVSAKYYFNGDATVVFRYRLYSFHACQENRRGQ-KGEVEMRLWRLIPSVEKRLRAEGYD-----LTNFEWFSGSRGGRGNMDE-SGGNGVPSDAVRVAEQMLGCEIYWSPDEDWDFTD----LEGAANGTGSEEERMARVVCVSEGKDPAEGRQAFVGLMSEDGEGTWITS-QTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGD-----------FVYGNQRGVPYKMRRVL--------------VPGPLEWTLGREWRTEDLYAEKMSAI 885
            QVV DR  G+  G GGGHEHIHC+L       VP    GD   D  GDT      R    + A +YFNG+   +FR+R Y   A   +        V M+L  L P +E+ LR    +      T ++ +SG    + + D       +PS    +   + GC++ W  +EDWD       L+ A N   S+E       C +          +F   M     G  + S   + G  IL+KD++ L  D+ W+NDRG+D  G+           FVYGN+RGVPYK+ RV               V G L+WTLG  +RT   Y  K+ AI
Sbjct:   93 QVVLDRQHGLTPGAGGGHEHIHCTL-------VPCPDFGD---DAEGDT------RRSRWILAAFYFNGNPQQIFRFRAYQLWAPDHDGMDDGSAVVRMKLNTLSPILEQALRKRSEEPCSWWRTAWKVWSGEDKKKFHEDIIPWSQFIPS----LVSPLQGCDVLW--EEDWDAAKHSYLLDNAYN---SDESNDITSFCDT----------SFHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYDPDGETDSMNENQDMPFVYGNRRGVPYKLERVSHIVSTAGAELQVAPVSGELQWTLGGSYRTPGEYEAKLKAI 389          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A7S2PZJ6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PZJ6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.400e-25
Identity = 97/366 (26.50%), Postives = 150/366 (40.98%), Query Frame = 1
Query:    1 QVVADRNAGMLAGPGGGHEHIHCSLRRL-NSAQVPLQILGDGDWDEPGDTFGRSRVRPMAVVSAKYYFNGDATVVFRYRLYSFHACQE---NRRGQKGE-VEMRLWRLIPSVEKRLRA----------EGYDLTNFEWFSGSRGGRGNMDESGGNG---VPSDAVR-VAEQMLGCEIYWSPDEDWD-----FTDLEGAANGTGSEEERMARVVCVSEGKDPAEGRQAFVGLMSEDGEGTWITS-QTVDGLEILVKDDIRLSYDRLWVNDRGFDRKG--------------------DFVYGNQRGVPYKMRRV--------------LVPGP------------LEWTLGREWRTEDLYAEKMSAI 885
            QV+ DRN  +    GGGHEHIHC+L    ++A    Q   +  W                 + A +YFNG+   +FR+R+Y   + Q+   N     GE V M+L  L   +E++LR           E YD+    W +    G    D++  N      S+ ++ +   ++GC++ W P   WD     + +++   N T S    + +        +  +G  A    M     G  + S   + G  IL+KD++ L  D  W+NDRG+D                        FVYGN+RGVPYK+ RV              +   P            L WTLG ++R +  Y EK+ A+
Sbjct:   76 QVIRDRNHALAPADGGGHEHIHCTLVPCPHTAVTQEQRQNNDQW-----------------ILAAFYFNGNPRQIFRFRMYKLISPQDDDSNSNNIDGEKVRMKLHTLSSELEQQLRQYSDQPCTWWRETYDV----WLNSINEGENESDDNRSNEWNTFRSEGIQHLVSPLVGCDVLWDPQ--WDPKKHAYLNVDEYGNDTSSSPTTINK-------NNNVDGCHA---TMEAGSAGAIVDSISLIPGKRILIKDELSLWEDEFWINDRGYDPDAVVDDNDGGGNDENEDGVGNMPFVYGNRRGVPYKLERVSCISTENTNEGSDDMSSAPPLLLERTIHKQELAWTLGDDFREQTEYEEKLRAV 408          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: D7G1T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T2_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 5.730e-20
Identity = 49/102 (48.04%), Postives = 54/102 (52.94%), Query Frame = 1
Query:    1 QVVADRNAGMLAGPGGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRVRPMAVVS-----------------AKYYFNGDATVVFRYRLYSFHAC 255
            QVVADR AGM  GPGGGHEHIHCSL+RL+ A+VP Q+                                          AKYYFNGD+ VVFRYRLYSFHAC
Sbjct:   75 QVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPEQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKYYFNGDSNVVFRYRLYSFHAC 176          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A1X6PC69_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PC69_PORUM)

HSP 1 Score: 84.3 bits (207), Expect = 2.660e-16
Identity = 57/160 (35.62%), Postives = 71/160 (44.38%), Query Frame = 1
Query:    1 QVVADRNAGMLAGPGGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRVRPMAVVSAKYYFNGDATVVFRYRLYSFHACQENRRGQKGEVEMRLWRLIPSVEKRLRAEGYDLTNFEWFSGSRGGRGNMDESGGNGVPSDAVRVAEQMLGCEIYW 480
            QVV +R AG+    GGGHEHIHC+L  L          GDG W                 + AKYYFNGD +VVFR RLY      E+     G +EMR++RL    E  LRA GYD+                      G+      V + + GCE+YW
Sbjct:   27 QVVEERAAGLSPREGGGHEHIHCTLTSL----------GDG-W-----------------LFAKYYFNGDPSVVFRSRLYRVLPVVES---PVGLLEMRIYRLFAEAEASLRATGYDV---------------------RGLSFTDADVYDWLQGCEVYW 134          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A7S2A9U5_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9U5_TRICV)

HSP 1 Score: 81.6 bits (200), Expect = 7.160e-15
Identity = 50/122 (40.98%), Postives = 66/122 (54.10%), Query Frame = 1
Query:  589 PAEGRQAFVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKG-DFVYGNQRGVPYKMRRV----------------------LVPGPLEWTLGREWRTEDLYAEKMSAI 885
            P E  Q  V  +  +GE   + S  + G +I V+D++ L    LW+NDRG+D +G DFVYGNQRGVPY+M RV                      +V G L+WTLG   RTE LY E++ AI
Sbjct:   73 PGETFQDGVHAVMVNGEAV-VPSLMIPGAKIRVRDELSLWDGALWINDRGYDPEGGDFVYGNQRGVPYEMGRVTTFLRGDGDGEGSPPLFATERTVVNGDLKWTLGPRHRTEGLYRERVEAI 193          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC)

HSP 1 Score: 78.6 bits (192), Expect = 4.700e-13
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 1
Query:  649 ITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKG-DFVYGNQRGVPYKMRRV----------LVPGPLEWTLGREWRTEDLYAEKMSAI 885
            + SQ + G +IL+KD + L  D LW++DRGFD     F+YGNQRGVPY++ RV          +V   L WTLG ++R+E  Y +KM A+
Sbjct:  218 VESQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLERVTDIALNNGRTIVQEDLAWTLGPDFRSEGEYQDKMVAV 307          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A5J4Z4Z5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Z5_PORPP)

HSP 1 Score: 78.6 bits (192), Expect = 1.110e-12
Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 1
Query:  610 FVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGDFVYGNQRGVPYKMRRVLVPGPLEWT 831
            F G M+  G G  + S T+    ILVKDD+ L+ + LWVNDRGFD  G FVYGN+RGVPYKM+R      LEWT
Sbjct:  408 FRGFMA--GGGCTVFSPTMKS-RILVKDDLILTGNELWVNDRGFDENGHFVYGNRRGVPYKMKRTSCNPHLEWT 478          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A7S2SCY1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCY1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.090e-12
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 1
Query:  607 AFVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKG--DFVYGNQRGVPYKMRRV-------------LVPGP-LEWTLGREWRTEDLYAEKMSAI 885
            A+  +M     GT + SQ + G+ I ++D++ L  +  W+NDRG D +    F+YGNQRG+PYK++RV             ++  P L WTLG + RTE  Y + M+ I
Sbjct:  146 AYHAVMLAGPNGTTVASQVIPGMYINIRDELSLWKNEFWINDRGLDPQNVSSFIYGNQRGIPYKLKRVTQNNNIFRQWKPRMIHDPKLAWTLGPDHRTEFDYQQMMNEI 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5K9Q8_9PHAE6.740e-10052.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T3_ECTSI1.140e-4362.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K0TER5_THAOC5.580e-3332.23Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2PZJ6_9STRA5.400e-2526.50Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
D7G1T2_ECTSI5.730e-2048.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1X6PC69_PORUM2.660e-1635.63Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A7S2A9U5_TRICV7.160e-1540.98Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
B7G7Q1_PHATC4.700e-1344.44Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A5J4Z4Z5_PORPP1.110e-1255.41Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S2SCY1_9STRA3.090e-1236.70Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5744contigH-elongata_contig5744:6218..7580 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.0
Seed ortholog evalue2.6e-35
Seed eggNOG ortholog2880.D7G1T3
EggNOG free text desc.CpeT/CpcT family (DUF1001)
EggNOG OGs2CBDP@1,2SAUK@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_004240.1
Exons2
Model size885
Cds size858
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5744.13212.1prot_H-elongata_contig5744.13212.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5744 6245..7580 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930933.4921086-UTR-H-elongata_contig5744:6217..62441622930933.4921086-UTR-H-elongata_contig5744:6217..6244Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5744 6218..6244 +
1691679630.5518777-UTR-H-elongata_contig5744:6217..62441691679630.5518777-UTR-H-elongata_contig5744:6217..6244Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5744 6218..6244 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930933.5101707-CDS-H-elongata_contig5744:6244..64751622930933.5101707-CDS-H-elongata_contig5744:6244..6475Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 6245..6475 +
1691679630.5632668-CDS-H-elongata_contig5744:6244..64751691679630.5632668-CDS-H-elongata_contig5744:6244..6475Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 6245..6475 +
1622930933.5246277-CDS-H-elongata_contig5744:6953..75801622930933.5246277-CDS-H-elongata_contig5744:6953..7580Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 6954..7580 +
1691679630.5739965-CDS-H-elongata_contig5744:6953..75801691679630.5739965-CDS-H-elongata_contig5744:6953..7580Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 6954..7580 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5744.13212.1

>prot_H-elongata_contig5744.13212.1 ID=prot_H-elongata_contig5744.13212.1|Name=mRNA_H-elongata_contig5744.13212.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
MLAGPGGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRVRPMA
VVSAKYYFNGDATVVFRYRLYSFHACQENRRGQKGEVEMRLWRLIPSVEK
RLRAEGYDLTNFEWFSGSRGGRGNMDESGGNGVPSDAVRVAEQMLGCEIY
WSPDEDWDFTDLEGAANGTGSEEERMARVVCVSEGKDPAEGRQAFVGLMS
EDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGDFVYGNQR
GVPYKMRRVLVPGPLEWTLGREWRTEDLYAEKMSAI
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mRNA from alignment at H-elongata_contig5744:6218..7580+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5744.13212.1 ID=mRNA_H-elongata_contig5744.13212.1|Name=mRNA_H-elongata_contig5744.13212.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1363bp|location=Sequence derived from alignment at H-elongata_contig5744:6218..7580+ (Himanthalia elongata Himel1 dioecious)
CAGGTCGTAGCAGACCGCAACGCCGGAATGCTCGCCGGCCCGGGTGGGGG CCACGAGCACATCCACTGCAGCCTGCGACGTCTGAACTCCGCCCAGGTGC CCCTGCAGATTCTCGGGGATGGAGACTGGGACGAGCCTGGAGACACGTTC GGACGGAGCCGCGTACGGCCCATGGCAGTGGTGTCCGCCAAGTACTACTT CAATGGCGACGCCACGGTGGTTTTCCGATATCGTCTCTACAGCTTCCACG CTTGTCAGGTAATCGCGAATACATGGGCCATGCGTCGGCAAATGCTACCA GGGCACTGTCGCCCACCAACGAGGCGGGGAGAGGCAGCGGAGGGCGTATA TAGTATGTCAAAACAAGTGGGGGGGGGGGATTATTTTTGTAGCGTCCTTT TCACATTTTTGCTCTCTCGTTGTGACGAAGAACTGGTTTGATTTGAGCTA TATACTGAAATAAGAGAGGGGCAAGGGTTCACGCGGTCCATGGTCAGAAT ATGTGAGCTAACCACTGTTTGTAGCTTTTGACGACGAGAAGTACTATTAA TGGCGGGTTGCGTCAGATGGGTGTGGTTAAACCACAAGACTCGTCTCCCC GGTGACAGCCCCAGGAGAGGTTTGCGACCTAGGTAAACTAAAGCTAAATC GATCGTTCGTGGCACTTTTCAAGGTAGGTGTTTCAGGATCTCCGAATCCG CATTGTCTGTGTTCTCCTTTCAAACTCCTCCCTCAGGAAAACCGCCGCGG GCAGAAGGGGGAAGTTGAAATGAGGCTCTGGAGGTTGATCCCCTCGGTGG AAAAACGCCTCCGCGCCGAGGGCTATGACCTGACCAACTTCGAATGGTTC AGTGGTAGTAGGGGAGGCAGAGGCAACATGGATGAATCTGGGGGAAATGG AGTTCCTTCGGATGCGGTTAGAGTCGCCGAGCAAATGTTGGGCTGCGAAA TATACTGGAGCCCAGACGAAGACTGGGATTTCACAGATTTGGAAGGCGCT GCTAATGGCACGGGCAGCGAGGAAGAAAGAATGGCAAGAGTCGTGTGTGT TTCAGAGGGAAAAGACCCTGCAGAAGGCCGGCAGGCTTTCGTCGGGCTGA TGAGCGAGGACGGCGAAGGCACGTGGATCACGTCGCAGACCGTTGATGGC CTTGAGATCCTAGTAAAGGACGACATCAGGCTGTCGTATGACCGGCTGTG GGTCAACGACAGGGGCTTCGACCGGAAGGGTGATTTCGTGTACGGGAACC AGAGGGGAGTGCCCTACAAAATGCGCAGGGTTCTGGTCCCCGGTCCGCTG GAGTGGACATTAGGGCGAGAGTGGAGGACAGAAGACTTGTACGCCGAGAA AATGTCCGCCATC
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Coding sequence (CDS) from alignment at H-elongata_contig5744:6218..7580+

>mRNA_H-elongata_contig5744.13212.1 ID=mRNA_H-elongata_contig5744.13212.1|Name=mRNA_H-elongata_contig5744.13212.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig5744:6218..7580+ (Himanthalia elongata Himel1 dioecious)
ATGCTCGCCGGCCCGGGTGGGGGCCACGAGCACATCCACTGCAGCCTGCG
ACGTCTGAACTCCGCCCAGGTGCCCCTGCAGATTCTCGGGGATGGAGACT
GGGACGAGCCTGGAGACACGTTCGGACGGAGCCGCGTACGGCCCATGGCA
GTGGTGTCCGCCAAGTACTACTTCAATGGCGACGCCACGGTGGTTTTCCG
ATATCGTCTCTACAGCTTCCACGCTTGTCAGATGCTCGCCGGCCCGGGTG
GGGGCCACGAGCACATCCACTGCAGCCTGCGACGTCTGAACTCCGCCCAG
GTGCCCCTGCAGATTCTCGGGGATGGAGACTGGGACGAGCCTGGAGACAC
GTTCGGACGGAGCCGCGTACGGCCCATGGCAGTGGTGTCCGCCAAGTACT
ACTTCAATGGCGACGCCACGGTGGTTTTCCGATATCGTCTCTACAGCTTC
CACGCTTGTCAGGAAAACCGCCGCGGGCAGAAGGGGGAAGTTGAAATGAG
GCTCTGGAGGTTGATCCCCTCGGTGGAAAAACGCCTCCGCGCCGAGGGCT
ATGACCTGACCAACTTCGAATGGTTCAGTGGTAGTAGGGGAGGCAGAGGC
AACATGGATGAATCTGGGGGAAATGGAGTTCCTTCGGATGCGGTTAGAGT
CGCCGAGCAAATGTTGGGCTGCGAAATATACTGGAGCCCAGACGAAGACT
GGGATTTCACAGATTTGGAAGGCGCTGCTAATGGCACGGGCAGCGAGGAA
GAAAGAATGGCAAGAGTCGTGTGTGTTTCAGAGGGAAAAGACCCTGCAGA
AGGCCGGCAGGCTTTCGTCGGGCTGATGAGCGAGGACGGCGAAGGCACGT
GGATCACGTCGCAGACCGTTGATGGCCTTGAGATCCTAGTAAAGGACGAC
ATCAGGCTGTCGTATGACCGGCTGTGGGTCAACGACAGGGGCTTCGACCG
GAAGGGTGATTTCGTGTACGGGAACCAGAGGGGAGTGCCCTACAAAATGC
GCAGGGTTCTGGTCCCCGGTCCGCTGGAGTGGACATTAGGGCGAGAGTGG
AGGACAGAAGACTTGTACGCCGAGAAAATGTCCGCCATCGAAAACCGCCG
CGGGCAGAAGGGGGAAGTTGAAATGAGGCTCTGGAGGTTGATCCCCTCGG
TGGAAAAACGCCTCCGCGCCGAGGGCTATGACCTGACCAACTTCGAATGG
TTCAGTGGTAGTAGGGGAGGCAGAGGCAACATGGATGAATCTGGGGGAAA
TGGAGTTCCTTCGGATGCGGTTAGAGTCGCCGAGCAAATGTTGGGCTGCG
AAATATACTGGAGCCCAGACGAAGACTGGGATTTCACAGATTTGGAAGGC
GCTGCTAATGGCACGGGCAGCGAGGAAGAAAGAATGGCAAGAGTCGTGTG
TGTTTCAGAGGGAAAAGACCCTGCAGAAGGCCGGCAGGCTTTCGTCGGGC
TGATGAGCGAGGACGGCGAAGGCACGTGGATCACGTCGCAGACCGTTGAT
GGCCTTGAGATCCTAGTAAAGGACGACATCAGGCTGTCGTATGACCGGCT
GTGGGTCAACGACAGGGGCTTCGACCGGAAGGGTGATTTCGTGTACGGGA
ACCAGAGGGGAGTGCCCTACAAAATGCGCAGGGTTCTGGTCCCCGGTCCG
CTGGAGTGGACATTAGGGCGAGAGTGGAGGACAGAAGACTTGTACGCCGA
GAAAATGTCCGCCATC
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