prot_H-elongata_contig5744.13212.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5744.13212.1
Unique Nameprot_H-elongata_contig5744.13212.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length286
Homology
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 1.310e-94
Identity = 160/311 (51.45%), Postives = 186/311 (59.81%), Query Frame = 0
Query:    1 MLAGPGGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRV----------------RPMAVVSAKYYFNGDATVVFRYRLYSFHACQENRRGQKGEVEMRLWRLIPSVEKRLRAEGYDLTNFEWFSGSRGGR--GNMDESGGNGVPSDAVR----VAEQMLGCEIYWSPDEDW--DFTDLEGAANGTGSEEERMARVVCVSEGKDPAEGR-QAFVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGDFVYGNQRGVPYKMRRVLVPGPLEWTLGREWRTEDLYAEKMSAI 286
            M  GPGGGHEHIHCSL++L+ A+VP Q+                                  RP+AVV+AKYYFNGD+ VVFRYRLYSFHAC  N  G +GE  MRLWRL+P VE RLRA  YDLT+F W       R      ++  N   S   R    V E+M GCEIYW   +    D   + G  +G G ++     V     G+D A G  ++FVGLM +D  GTW+ SQ VDGLEILVKDD+RL  D LWVNDRGFDR G+FVYGNQR VPYKMRRV   GPLEWTLG   RTE  YAEKMSAI
Sbjct:   84 MTPGPGGGHEHIHCSLKQLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRANSYDLTSFSWSDDDSNQREPSRGSDNASNDRCSKEGRTGNDVVERMFGCEIYWGRHQAGGEDEKSMPGGISGPGKQDANGGAVPERGAGEDAAGGGGKSFVGLMGKDDSGTWVESQNVDGLEILVKDDLRLWPDSLWVNDRGFDRDGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAEKMSAI 394          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: D7G1T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T3_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 8.790e-44
Identity = 79/126 (62.70%), Postives = 91/126 (72.22%), Query Frame = 0
Query:  162 LEGAANGTGSEEERMARVVCVSEGKDPAEGR-QAFVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGDFVYGNQRGVPYKMRRVLVPGPLEWTLGREWRTEDLYAEKMSAI 286
            + G  +G G ++     V     G+D A G  ++FVGLM ED  GTW+ SQ VDGLEILVKDD+RL  DRLWVNDRGFDR+G+FVYGNQR VPYKMRRV   GPLEWTLG   RTE  YAE+MSAI
Sbjct:    1 MPGGISGPGKQDTDGGAVPERGAGEDAAGGGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAERMSAI 126          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC)

HSP 1 Score: 124 bits (312), Expect = 1.720e-29
Identity = 101/323 (31.27%), Postives = 142/323 (43.96%), Query Frame = 0
Query:    1 MLAGPGGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRVRPMAVVSAKYYFNGDATVVFRYRLYSFHACQENRRGQ-KGEVEMRLWRLIPSVEKRLRAEGYD-----LTNFEWFSGSRGGRGNMDE-SGGNGVPSDAVRVAEQMLGCEIYWSPDEDWDFTD----LEGAANGTGSEEERMARVVCVSEGKDPAEGRQAFVGLMSEDGEGTWITS-QTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGD-----------FVYGNQRGVPYKMRRVL--------------VPGPLEWTLGREWRTEDLYAEKMSAI 286
            +  G GGGHEHIHC+L       VP    GD   D  GDT      R    + A +YFNG+   +FR+R Y   A   +        V M+L  L P +E+ LR    +      T ++ +SG    + + D       +PS    +   + GC++ W  +EDWD       L+ A N   S+E       C +          +F   M     G  + S   + G  IL+KD++ L  D+ W+NDRG+D  G+           FVYGN+RGVPYK+ RV               V G L+WTLG  +RT   Y  K+ AI
Sbjct:  102 LTPGAGGGHEHIHCTL-------VPCPDFGD---DAEGDT------RRSRWILAAFYFNGNPQQIFRFRAYQLWAPDHDGMDDGSAVVRMKLNTLSPILEQALRKRSEEPCSWWRTAWKVWSGEDKKKFHEDIIPWSQFIPS----LVSPLQGCDVLW--EEDWDAAKHSYLLDNAYN---SDESNDITSFCDT----------SFHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYDPDGETDSMNENQDMPFVYGNRRGVPYKLERVSHIVSTAGAELQVAPVSGELQWTLGGSYRTPGEYEAKLKAI 389          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A7S2PZJ6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PZJ6_9STRA)

HSP 1 Score: 103 bits (258), Expect = 9.620e-22
Identity = 92/352 (26.14%), Postives = 143/352 (40.62%), Query Frame = 0
Query:    6 GGGHEHIHCSLRRL-NSAQVPLQILGDGDWDEPGDTFGRSRVRPMAVVSAKYYFNGDATVVFRYRLYSFHACQE---NRRGQKGE-VEMRLWRLIPSVEKRLRA----------EGYDLTNFEWFSGSRGGRGNMDESGGNG---VPSDAVR-VAEQMLGCEIYWSPDEDWD-----FTDLEGAANGTGSEEERMARVVCVSEGKDPAEGRQAFVGLMSEDGEGTWITS-QTVDGLEILVKDDIRLSYDRLWVNDRGFDRKG--------------------DFVYGNQRGVPYKMRRV--------------LVPGP------------LEWTLGREWRTEDLYAEKMSAI 286
            GGGHEHIHC+L    ++A    Q   +  W                 + A +YFNG+   +FR+R+Y   + Q+   N     GE V M+L  L   +E++LR           E YD+    W +    G    D++  N      S+ ++ +   ++GC++ W P   WD     + +++   N T S    + +        +  +G  A    M     G  + S   + G  IL+KD++ L  D  W+NDRG+D                        FVYGN+RGVPYK+ RV              +   P            L WTLG ++R +  Y EK+ A+
Sbjct:   90 GGGHEHIHCTLVPCPHTAVTQEQRQNNDQW-----------------ILAAFYFNGNPRQIFRFRMYKLISPQDDDSNSNNIDGEKVRMKLHTLSSELEQQLRQYSDQPCTWWRETYDV----WLNSINEGENESDDNRSNEWNTFRSEGIQHLVSPLVGCDVLWDPQ--WDPKKHAYLNVDEYGNDTSSSPTTINK-------NNNVDGCHA---TMEAGSAGAIVDSISLIPGKRILIKDELSLWEDEFWINDRGYDPDAVVDDNDGGGNDENEDGVGNMPFVYGNRRGVPYKLERVSCISTENTNEGSDDMSSAPPLLLERTIHKQELAWTLGDDFREQTEYEEKLRAV 408          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A7S2A9U5_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9U5_TRICV)

HSP 1 Score: 81.6 bits (200), Expect = 6.210e-15
Identity = 50/122 (40.98%), Postives = 66/122 (54.10%), Query Frame = 0
Query:  188 PAEGRQAFVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKG-DFVYGNQRGVPYKMRRV----------------------LVPGPLEWTLGREWRTEDLYAEKMSAI 286
            P E  Q  V  +  +GE   + S  + G +I V+D++ L    LW+NDRG+D +G DFVYGNQRGVPY+M RV                      +V G L+WTLG   RTE LY E++ AI
Sbjct:   73 PGETFQDGVHAVMVNGEAV-VPSLMIPGAKIRVRDELSLWDGALWINDRGYDPEGGDFVYGNQRGVPYEMGRVTTFLRGDGDGEGSPPLFATERTVVNGDLKWTLGPRHRTEGLYRERVEAI 193          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: D7G1T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T2_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 7.220e-15
Identity = 41/93 (44.09%), Postives = 46/93 (49.46%), Query Frame = 0
Query:    1 MLAGPGGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRVRPMAVVS-----------------AKYYFNGDATVVFRYRLYSFHAC 76
            M  GPGGGHEHIHCSL+RL+ A+VP Q+                                          AKYYFNGD+ VVFRYRLYSFHAC
Sbjct:   84 MTPGPGGGHEHIHCSLKRLDPAEVPEQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKYYFNGDSNVVFRYRLYSFHAC 176          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A1X6PC69_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PC69_PORUM)

HSP 1 Score: 75.9 bits (185), Expect = 3.190e-13
Identity = 51/146 (34.93%), Postives = 63/146 (43.15%), Query Frame = 0
Query:    6 GGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRVRPMAVVSAKYYFNGDATVVFRYRLYSFHACQENRRGQKGEVEMRLWRLIPSVEKRLRAEGYDLTNFEWFSGSRGGRGNMDESGGNGVPSDAVRVAEQMLGCEIYW 151
            GGGHEHIHC+L  L          GDG W                 + AKYYFNGD +VVFR RLY      E+     G +EMR++RL    E  LRA GYD+                      G+      V + + GCE+YW
Sbjct:   41 GGGHEHIHCTLTSL----------GDG-W-----------------LFAKYYFNGDPSVVFRSRLYRVLPVVES---PVGLLEMRIYRLFAEAEASLRATGYDV---------------------RGLSFTDADVYDWLQGCEVYW 134          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC)

HSP 1 Score: 78.6 bits (192), Expect = 4.100e-13
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0
Query:  208 ITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKG-DFVYGNQRGVPYKMRRV----------LVPGPLEWTLGREWRTEDLYAEKMSAI 286
            + SQ + G +IL+KD + L  D LW++DRGFD     F+YGNQRGVPY++ RV          +V   L WTLG ++R+E  Y +KM A+
Sbjct:  218 VESQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLERVTDIALNNGRTIVQEDLAWTLGPDFRSEGEYQDKMVAV 307          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A5J4Z4Z5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Z5_PORPP)

HSP 1 Score: 78.6 bits (192), Expect = 9.560e-13
Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  195 FVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGDFVYGNQRGVPYKMRRVLVPGPLEWT 268
            F G M+  G G  + S T+    ILVKDD+ L+ + LWVNDRGFD  G FVYGN+RGVPYKM+R      LEWT
Sbjct:  408 FRGFMA--GGGCTVFSPTMKS-RILVKDDLILTGNELWVNDRGFDENGHFVYGNRRGVPYKMKRTSCNPHLEWT 478          
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Match: A0A7S2SCY1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCY1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.720e-12
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 0
Query:  194 AFVGLMSEDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKG--DFVYGNQRGVPYKMRRV-------------LVPGP-LEWTLGREWRTEDLYAEKMSAI 286
            A+  +M     GT + SQ + G+ I ++D++ L  +  W+NDRG D +    F+YGNQRG+PYK++RV             ++  P L WTLG + RTE  Y + M+ I
Sbjct:  146 AYHAVMLAGPNGTTVASQVIPGMYINIRDELSLWKNEFWINDRGLDPQNVSSFIYGNQRGIPYKLKRVTQNNNIFRQWKPRMIHDPKLAWTLGPDHRTEFDYQQMMNEI 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5744.13212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5K9Q8_9PHAE1.310e-9451.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T3_ECTSI8.790e-4462.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K0TER5_THAOC1.720e-2931.27Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2PZJ6_9STRA9.620e-2226.14Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2A9U5_TRICV6.210e-1540.98Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
D7G1T2_ECTSI7.220e-1544.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1X6PC69_PORUM3.190e-1334.93Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
B7G7Q1_PHATC4.100e-1344.44Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A5J4Z4Z5_PORPP9.560e-1355.41Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S2SCY1_9STRA2.720e-1236.70Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010404Chromophore lyase CpcT/CpeTPFAMPF06206CpeTcoord: 90..258
e-value: 1.4E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5744contigH-elongata_contig5744:6245..7580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5744.13212.1mRNA_H-elongata_contig5744.13212.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5744 6218..7580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5744.13212.1 ID=prot_H-elongata_contig5744.13212.1|Name=mRNA_H-elongata_contig5744.13212.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
MLAGPGGGHEHIHCSLRRLNSAQVPLQILGDGDWDEPGDTFGRSRVRPMA
VVSAKYYFNGDATVVFRYRLYSFHACQENRRGQKGEVEMRLWRLIPSVEK
RLRAEGYDLTNFEWFSGSRGGRGNMDESGGNGVPSDAVRVAEQMLGCEIY
WSPDEDWDFTDLEGAANGTGSEEERMARVVCVSEGKDPAEGRQAFVGLMS
EDGEGTWITSQTVDGLEILVKDDIRLSYDRLWVNDRGFDRKGDFVYGNQR
GVPYKMRRVLVPGPLEWTLGREWRTEDLYAEKMSAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010404CpcT/CpeT