prot_H-elongata_contig116688.1309.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: D8LEF3_ECTSI (Putative hUPF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF3_ECTSI) HSP 1 Score: 184 bits (466), Expect = 1.300e-51 Identity = 92/112 (82.14%), Postives = 105/112 (93.75%), Query Frame = 0
Query: 1 IRSLVDGVFDSLCAHLEWGHERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQLPEEEEEEE-TGGISLWEGGIGGDRSGYTGPFEESER 111
+RSLVDGVFD+LC+HLE GHE+LGRLEKKME+DRLTNG+LT+EKE+NLEESRK YE LLGNV+SLA+SLNRDMPQLPE E EEE +GGISLWEGG+GGD +GYTGPFEESER
Sbjct: 674 LRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESER 785
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: A0A835YRH9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH9_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.830e-21 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 0
Query: 4 LVDGVFDSLCAHLEWGHERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQLPEEEEEEETGGISLWEGGIGGDRSGYTGPFEESERR 112
++ GV L HL H+ L +LE++ME+DRL GSLT+EKE+NLE S AY LL NV +L+ +L+ DMP LPE++EEEE GG+ LW G+G G GP+++ E +
Sbjct: 257 VLQGVLRRLRGHLVTAHKALQKLERRMEKDRLLCGSLTEEKERNLELSAGAYNKLLSNVVALSDALDEDMPDLPEDKEEEELGGVELWSSGVGLGE-GDLGPWDDLETK 364
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: A0A8J2S5M1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S5M1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.580e-9 Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 0
Query: 20 HERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQL---PEEEEEEETGGISLWEGGIGGDRSGYTGPFEESERR 112
HE L LE+K RD L +GSLT+EKEK LE++RKA E L+ VS+L +L+ D P L + EEE++ G +SLW G RS G +++ R
Sbjct: 373 HEALRSLERKAARDALNHGSLTEEKEKALEDARKAREKLVKEVSALCDALDIDPPVLLDGDDSEEEDDKGELSLWTAERGS-RSESAGAYDDDAAR 467
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: A0A6V0BH58_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0BH58_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.100e-9 Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 0
Query: 7 GVFDSLCAHLEWGHERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQLPEEEEEEETGG--ISLWEGGIGGDRSGYT-GPFEESERR 112
G ++ L L +L ++EK+ E+DRL GSLT+ +EK L+++RK E L +V +++ ++ +PQL +E EEE GG + +W GGD G GPF++ E R
Sbjct: 486 GAYEFLSKSLVQTDTKLQKMEKRCEQDRLLAGSLTEAREKGLQDARKLRETLEKSVEAMSDIMDLPLPQLEKETEEETEGGTGVEVWTKD-GGDEDGTNFGPFDDEETR 593
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: A0A6V0BI57_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0BI57_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.140e-9 Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 0
Query: 7 GVFDSLCAHLEWGHERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQLPEEEEEEETGG--ISLWEGGIGGDRSGYT-GPFEESERR 112
G ++ L L +L ++EK+ E+DRL GSLT+ +EK L+++RK E L +V +++ ++ +PQL +E EEE GG + +W GGD G GPF++ E R
Sbjct: 486 GAYEFLSKSLVQTDTKLQKMEKRCEQDRLLAGSLTEAREKGLQDARKLRETLEKSVEAMSDIMDLPLPQLEKETEEETEGGTGVEVWTKD-GGDEDGTNFGPFDDEETR 593
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: UPI001E1E0EF2 (LOW QUALITY PROTEIN: regulator of nonsense transcripts 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0EF2) HSP 1 Score: 62.0 bits (149), Expect = 7.440e-9 Identity = 30/90 (33.33%), Postives = 53/90 (58.89%), Query Frame = 0
Query: 2 RSLVDGVFDSLCAHLEWGHERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQLPEEEEEEETGGISLW 91
R+L+ ++SLC HL H+ L +EK+ + LT G L+ E+++ EE +Y+ L N ++ DMP LPE++ +E+ GG+ ++
Sbjct: 418 RNLLGEYYNSLCKHLMADHKNLKNMEKQNRKTLLTKGELSTERKEKYEEFYNSYQKLFSNTQVFTDLVDEDMPDLPEDDPQEDDGGLDIF 507
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: A0A7S1ZWS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZWS9_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 9.390e-9 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 0
Query: 7 GVFDSLCAHLEWGHERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQLPEEEEEEETGGISLWEGGIGGDRSG 101
G + +L + H +L +LEK+ E+D+L GSL++ +EK L+++RK E + +V +LA SLN+D+P+L EEEE G G GGD+ G
Sbjct: 312 GTYQTLSSTYLSTHTKLMKLEKRCEQDKLITGSLSEHREKGLQDARKLLETIQKSVETLAESLNQDVPKL---EEEEXXGN------GTGGDKDG 397
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: A0A7S4QUB8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUB8_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 9.850e-9 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 0
Query: 7 GVFDSLCAHLEWGHERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQLPEEEEEEETGGISLWEGGIGGDRSG 101
G + +L + H +L +LEK+ E+D+L GSL++ +EK L+++RK E + +V +LA SLN+D+P+L EEEE G G GGD+ G
Sbjct: 361 GTYQTLSSTYLSTHTKLMKLEKRCEQDKLITGSLSEHREKGLQDARKLLETIQKSVETLAESLNQDVPKL---EEEEXXGN------GTGGDKDG 446
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: A0A448Z1B4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1B4_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.020e-8 Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 0
Query: 7 GVFDSLCAHLEWGHERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQLPEEEEEEETGG--ISLWEGGIGGDRSGYT-GPFEESERR 112
G + L L +L ++EK+ E+DRL GSLTD +EK L+++RK E L +V +++ ++ +PQL +E EEE GG + +W GGD G GPF++ E R
Sbjct: 470 GAYAFLSRSLIETDTKLQKMEKRCEQDRLLAGSLTDAREKGLQDARKLRESLEKSVEAMSDIMDLPLPQLEKEAEEETEGGTGVEVWTKD-GGDEDGTDFGPFDDEETR 577
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Match: A0A6U5Q234_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5Q234_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 4.820e-8 Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 0
Query: 7 GVFDSLCAHLEWGHERLGRLEKKMERDRLTNGSLTDEKEKNLEESRKAYEVLLGNVSSLAASLNRDMPQLPEEEEEEETG---GISLW--EGGIGGDRSGYTGPFEESERR 112
G F +L L H +L +LEK+ E+DRL GSLT+ ++K L+++RK ++ L +V + L+ P L EE++EEE G+ +W EG G D GPF++ E R
Sbjct: 396 GAFGTLSKSLVETHGKLRKLEKRCEQDRLLAGSLTEARQKGLDDARKLFDNLQKSVEVIGDLLDLKPPVLNEEDDEEEEAKGSGLEVWTKEGEDGED----FGPFDDDETR 502 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116688.1309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig116688.1309.1 ID=prot_H-elongata_contig116688.1309.1|Name=mRNA_H-elongata_contig116688.1309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bpback to top |