mRNA_H-elongata_contig56191.13064.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig56191.13064.1
Unique NamemRNA_H-elongata_contig56191.13064.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5JIS9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS9_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.760e-28
Identity = 65/187 (34.76%), Postives = 101/187 (54.01%), Query Frame = 1
Query:   64 KVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            K  ++GKVDK+K  L  +              SP PS+ASI ++LA +  K   L H+D +QA+  A +DEE+++ IP  Y      + +  + +Y L Q+G+ W     D +   GFEQ KADPCVF ++VD    +V+ ++VDDIL     +   +   A+L +KF  KN G+  ++  C I R+
Sbjct:   10 KTNKEGKVDKFKALLVARGFSQIPNVDFFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLRIPAGYGDKSHKIVQAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMVIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNRGEYEWFDGCAIDRD 195          
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6D2KBY5_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KBY5_9BRAS)

HSP 1 Score: 120 bits (301), Expect = 4.190e-28
Identity = 72/207 (34.78%), Postives = 110/207 (53.14%), Query Frame = 1
Query:   19 PKDKLVVGTKMLYNRKVGQDGKVDKYKCRL-------------TEKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKF-----PGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            P  K VVG K +Y  K   DG +++YK RL             TE +SP     S+ +LLA +A K   L   D   AFL +D+DEE+YM +P+ Y        P PV RL+K+LY L QA + W +   D +   GF+Q  +D  +F + V GE    V V+VDDI+  +  +  +    ++L  +FK+K++G+ R+++   I R+
Sbjct:   29 PPGKNVVGCKWVYTIKYKADGTIERYKARLVAKGFTQQEGVDFTENFSPVAKLTSVKLLLALAAIKGWSLFQMDVSNAFLHSDLDEEIYMSLPQGYTPSSGSLPPNPVCRLHKSLYGLKQASRQWYHCLSDVLLRSGFKQSASDNTLFAKQV-GEKFTAVLVYVDDIMIASNSEDEVTSIKSSLSSEFKIKDLGELRFFLGLEIARS 234          
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: UPI0006A6DEFC (uncharacterized protein LOC106336398 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6DEFC)

HSP 1 Score: 120 bits (300), Expect = 6.480e-28
Identity = 72/208 (34.62%), Postives = 110/208 (52.88%), Query Frame = 1
Query:   19 PKDKLVVGTKMLYNRKVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKF------PGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            P  K  VG K ++  K   DG V+++K R+  K             +SP     ++ +LLA +AAK   + H D   AFL  D+DEE+YM++P+ Y++       P  V RL+K+LY L QA   WN+     +   GF+Q  +D  +F + VD +  +VV V+VDDIL        ++RF   L   FKL+++G A+Y++   I RN
Sbjct:  736 PPGKQSVGCKWIHTIKYNPDGTVERHKSRVVAKGYTQLEGLDYLDTFSPVAKIGTLRLLLAVAAAKQWSITHLDVSNAFLNGDLDEEIYMKLPQGYEELTGKKVPPNSVCRLHKSLYGLKQASHQWNHKLSHVITGDGFKQTHSDHSLFVKYVD-KVYLVVLVYVDDILIVGNDDDAVERFKTVLKSAFKLRDLGPAKYFLGFEIARN 942          
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.160e-27
Identity = 64/202 (31.68%), Postives = 108/202 (53.47%), Query Frame = 1
Query:   19 PKDKLVVGTKMLYNRKVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            P+ +  V  K  ++ K   +GK+ K+K RL  +              SP PS+ASI ++LA +  K   L H+D +QA+  A +DEE+++ +P         +G+  + +Y L Q+G+ W     D +   GFEQ KADPCVF ++VD    +++ ++VDD+L   +     +   A+L +KF  KN+G+  ++  C I R+
Sbjct:  201 PEGRRPVSPKWCFSWKTNNEGKIHKFKARLVARGFSKIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLV-AESDEDCEELLASLKKKFPTKNLGECEWFHRCAIERD 401          
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.230e-27
Identity = 64/202 (31.68%), Postives = 111/202 (54.95%), Query Frame = 1
Query:   19 PKDKLVVGTKMLYNRKVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            P+ +  V +K  ++ K  ++GK+D +K RL  +              SP PS+ASI ++LA +  K   L H+D +QA+  A +DEE+++++P         + +  + +Y L Q+G+ W     D +   GFEQ KADPCVF ++VD    +++ ++VDDIL     +   +   A+L +KF  KN+G+ +++  C I R+
Sbjct:  776 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERD 976          
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.290e-27
Identity = 64/202 (31.68%), Postives = 111/202 (54.95%), Query Frame = 1
Query:   19 PKDKLVVGTKMLYNRKVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            P+ +  V +K  ++ K  ++GK+D +K RL  +              SP PS+ASI ++LA +  K   L H+D +QA+  A +DEE+++++P         + +  + +Y L Q+G+ W     D +   GFEQ KADPCVF ++VD    +++ ++VDDIL     +   +   A+L +KF  KN+G+ +++  C I R+
Sbjct: 1155 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERD 1355          
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.300e-27
Identity = 64/202 (31.68%), Postives = 111/202 (54.95%), Query Frame = 1
Query:   19 PKDKLVVGTKMLYNRKVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            P+ +  V +K  ++ K  ++GK+D +K RL  +              SP PS+ASI ++LA +  K   L H+D +QA+  A +DEE+++++P         + +  + +Y L Q+G+ W     D +   GFEQ KADPCVF ++VD    +++ ++VDDIL     +   +   A+L +KF  KN+G+ +++  C I R+
Sbjct: 1175 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERD 1375          
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.310e-27
Identity = 64/202 (31.68%), Postives = 111/202 (54.95%), Query Frame = 1
Query:   19 PKDKLVVGTKMLYNRKVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            P+ +  V +K  ++ K  ++GK+D +K RL  +              SP PS+ASI ++LA +  K   L H+D +QA+  A +DEE+++++P         + +  + +Y L Q+G+ W     D +   GFEQ KADPCVF ++VD    +++ ++VDDIL     +   +   A+L +KF  KN+G+ +++  C I R+
Sbjct: 1318 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERD 1518          
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.970e-27
Identity = 64/202 (31.68%), Postives = 110/202 (54.46%), Query Frame = 1
Query:   19 PKDKLVVGTKMLYNRKVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            P+ +  V +K  ++ K  ++GK+D +K RL  +              SP PS+ASI ++LA +  K   L H+D +QA+  A +DEE+++++P         + +  + +Y L Q+G+ W     D +   GFEQ KADPCVF ++VD    +++ ++VDDIL     +   +   A+L +KF  KN+G+  ++  C I R+
Sbjct:  576 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECEWFDGCAIERD 776          
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6D2HGS3_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HGS3_9BRAS)

HSP 1 Score: 118 bits (295), Expect = 3.070e-27
Identity = 71/207 (34.30%), Postives = 109/207 (52.66%), Query Frame = 1
Query:   19 PKDKLVVGTKMLYNRKVGQDGKVDKYKCRL-------------TEKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKF-----PGPVGRLNKTLY*LVQAGKCWNNTFCDDMAAIGFEQGKADPCVFHEVVDGEAEVVVAVHVDDILAHTKYKATMDRFAAALGQKFKLKNMGDARYYMDCHITRN 585
            P  K VVG K +Y  K   DG +++YK RL             TE +SP     S+ +LLA +A K   L H D   AFL +D+DEE+YM +P+ Y        P PV R +K+LY L QA + W +   D +   GF Q  +D  +F + V G+    V V+VDDI+  +  +  +    ++L  +FK+K++G+ R+++   I R+
Sbjct:  875 PPGKNVVGCKWVYTIKYKADGTIERYKARLVAKGFTQQEGVDFTETFSPVAKLTSVKLLLALAAIKGWSLCHMDVSNAFLHSDLDEEIYMSLPQGYTPASGTLPPNPVCRFHKSLYGLKQASRQWYHCLSDVLLRSGFIQSASDNTLFAKHV-GDKFTAVLVYVDDIMIASNDEVEVASIKSSLSYEFKIKDLGELRFFLGLEIARS 1080          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIS9_9PHAE2.760e-2834.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2KBY5_9BRAS4.190e-2834.78Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
UPI0006A6DEFC6.480e-2834.62uncharacterized protein LOC106336398 n=1 Tax=Brass... [more]
A0A6H5JLS1_9PHAE2.160e-2731.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE2.230e-2731.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE2.290e-2731.68Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE2.300e-2731.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE2.310e-2731.68Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JTV6_9PHAE2.970e-2731.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2HGS3_9BRAS3.070e-2734.30Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56191contigH-elongata_contig56191:2025..2651 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score64.7
Seed ortholog evalue2.5e-08
Seed eggNOG ortholog15368.BRADI1G58725.1
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs37V5Q@33090,3GFFK@35493,3IKJW@38820,3M7B5@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size588
Cds size267
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56191.13064.1prot_H-elongata_contig56191.13064.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig56191 2298..2603 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930915.4441519-UTR-H-elongata_contig56191:2024..22971622930915.4441519-UTR-H-elongata_contig56191:2024..2297Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56191 2025..2297 -
1691679623.218165-UTR-H-elongata_contig56191:2024..22971691679623.218165-UTR-H-elongata_contig56191:2024..2297Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56191 2025..2297 -
1622930915.5012195-UTR-H-elongata_contig56191:2603..26511622930915.5012195-UTR-H-elongata_contig56191:2603..2651Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56191 2604..2651 -
1691679623.2652104-UTR-H-elongata_contig56191:2603..26511691679623.2652104-UTR-H-elongata_contig56191:2603..2651Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56191 2604..2651 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930915.4651928-CDS-H-elongata_contig56191:2297..25041622930915.4651928-CDS-H-elongata_contig56191:2297..2504Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56191 2298..2504 -
1691679623.229205-CDS-H-elongata_contig56191:2297..25041691679623.229205-CDS-H-elongata_contig56191:2297..2504Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56191 2298..2504 -
1622930915.4826083-CDS-H-elongata_contig56191:2543..26031622930915.4826083-CDS-H-elongata_contig56191:2543..2603Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56191 2544..2603 -
1691679623.2455714-CDS-H-elongata_contig56191:2543..26031691679623.2455714-CDS-H-elongata_contig56191:2543..2603Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56191 2544..2603 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig56191.13064.1

>prot_H-elongata_contig56191.13064.1 ID=prot_H-elongata_contig56191.13064.1|Name=mRNA_H-elongata_contig56191.13064.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
MLYNRKVGQDGKVDKYKCRLTEKYSPTPSTASILMLLATSAAKDGELRHF
DAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY*
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mRNA from alignment at H-elongata_contig56191:2025..2651-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig56191.13064.1 ID=mRNA_H-elongata_contig56191.13064.1|Name=mRNA_H-elongata_contig56191.13064.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=627bp|location=Sequence derived from alignment at H-elongata_contig56191:2025..2651- (Himanthalia elongata Himel1 dioecious)
TATAAGCAGGTAGCTCGGCCGAAGGATAAGCTCGTGGTTGGCACAAAAAT GCTCTACAATCGAAAGGTCGGACAGGACGGCAAGGTCGATAAATACAAGT GCCGACTTGTAGCTCAAGGGTTTTAGCAGGTGGAAGGTGTACACTAGACG GAAAAATACTCGCCCACGCCATCGACCGCGTCAATCCTGATGCTTTTGGC CACATCAGCGGCCAAGGACGGTGAGCTGCGCCATTTCGACGCGGAGCAGG CATTCTTGAAAGCGGACATCGATGAGGAGTTATATATGGAGATCCCCGAG GAGTACCAGAAGTTTCCGGGGCCAGTGGGACGGCTGAACAAGACCCTTTA CTGACTCGTACAGGCGGGGAAGTGCTGGAACAATACGTTCTGCGACGATA TGGCGGCGATTGGATTCGAGCAGGGAAAGGCGGATCCATGCGTGTTCCAT GAGGTCGTTGACGGCGAGGCGGAAGTAGTGGTGGCCGTACACGTGGACGA TATTCTTGCTCACACCAAGTACAAAGCGACTATGGATAGATTCGCGGCTG CGCTTGGACAAAAGTTCAAATTGAAGAACATGGGTGACGCCAGGTACTAC ATGGACTGTCACATTACTAGGAACCGC
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Coding sequence (CDS) from alignment at H-elongata_contig56191:2025..2651-

>mRNA_H-elongata_contig56191.13064.1 ID=mRNA_H-elongata_contig56191.13064.1|Name=mRNA_H-elongata_contig56191.13064.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=534bp|location=Sequence derived from alignment at H-elongata_contig56191:2025..2651- (Himanthalia elongata Himel1 dioecious)
ATGCTCTACAATCGAAAGGTCGGACAGGACGGCAAGGTCGATAAATACAA
GTGCCGACTTATGCTCTACAATCGAAAGGTCGGACAGGACGGCAAGGTCG
ATAAATACAAGTGCCGACTTACGGAAAAATACTCGCCCACGCCATCGACC
GCGTCAATCCTGATGCTTTTGGCCACATCAGCGGCCAAGGACGGTGAGCT
GCGCCATTTCGACGCGGAGCAGGCATTCTTGAAAGCGGACATCGATGAGG
AGTTATATATGGAGATCCCCGAGGAGTACCAGAAGTTTCCGGGGCCAGTG
GGACGGCTGAACAAGACCCTTTACTGAACGGAAAAATACTCGCCCACGCC
ATCGACCGCGTCAATCCTGATGCTTTTGGCCACATCAGCGGCCAAGGACG
GTGAGCTGCGCCATTTCGACGCGGAGCAGGCATTCTTGAAAGCGGACATC
GATGAGGAGTTATATATGGAGATCCCCGAGGAGTACCAGAAGTTTCCGGG
GCCAGTGGGACGGCTGAACAAGACCCTTTACTGA
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