prot_H-elongata_contig56191.13064.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6D2HGS3_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HGS3_9BRAS) HSP 1 Score: 69.7 bits (169), Expect = 6.220e-12 Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 0
Query: 2 LYNRKVGQDGKVDKYKCRL-------------TEKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKF-----PGPVGRLNKTLY 88
+Y K DG +++YK RL TE +SP S+ +LLA +A K L H D AFL +D+DEE+YM +P+ Y P PV R +K+LY
Sbjct: 886 VYTIKYKADGTIERYKARLVAKGFTQQEGVDFTETFSPVAKLTSVKLLLALAAIKGWSLCHMDVSNAFLHSDLDEEIYMSLPQGYTPASGTLPPNPVCRFHKSLY 990
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6D2KBY5_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KBY5_9BRAS) HSP 1 Score: 68.6 bits (166), Expect = 1.550e-11 Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 0
Query: 2 LYNRKVGQDGKVDKYKCRL-------------TEKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKF-----PGPVGRLNKTLY 88
+Y K DG +++YK RL TE +SP S+ +LLA +A K L D AFL +D+DEE+YM +P+ Y P PV RL+K+LY
Sbjct: 40 VYTIKYKADGTIERYKARLVAKGFTQQEGVDFTENFSPVAKLTSVKLLLALAAIKGWSLFQMDVSNAFLHSDLDEEIYMSLPQGYTPSSGSLPPNPVCRLHKSLY 144
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6D2ISQ4_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2ISQ4_9BRAS) HSP 1 Score: 66.6 bits (161), Expect = 7.180e-11 Identity = 37/105 (35.24%), Postives = 53/105 (50.48%), Query Frame = 0
Query: 2 LYNRKVGQDGKVDKYKCRL-------------TEKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKF-----PGPVGRLNKTLY 88
+Y K DG +++YK +L T+ +SP AS+ +LL SA K L D AFL +D+DEE+YM +P+ Y P PV RL K++Y
Sbjct: 31 VYTIKYKADGSIERYKAQLVAKGFTQQEGVDFTDTFSPVAKLASVKLLLGLSAIKGWSLSQMDVSNAFLHSDLDEEIYMSLPQGYTPASGTLPPNPVCRLRKSIY 135
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: UPI00123185CF (hypothetical protein n=1 Tax=Pseudomonas aeruginosa TaxID=287 RepID=UPI00123185CF) HSP 1 Score: 63.2 bits (152), Expect = 8.250e-11 Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0
Query: 22 EKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY 88
E YSP S ++ L A +A+KD + FD + AFL +++E +YM IP+ Y+K PG V RL K+LY
Sbjct: 49 EIYSPVVSQLTLKSLFALAASKDYNMMTFDVKTAFLYGELEENVYMNIPDGYEKQPGKVCRLKKSLY 115
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: UPI0006A6DEFC (uncharacterized protein LOC106336398 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6DEFC) HSP 1 Score: 66.2 bits (160), Expect = 1.030e-10 Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0
Query: 2 LYNRKVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKF------PGPVGRLNKTLY 88
++ K DG V+++K R+ K +SP ++ +LLA +AAK + H D AFL D+DEE+YM++P+ Y++ P V RL+K+LY
Sbjct: 747 IHTIKYNPDGTVERHKSRVVAKGYTQLEGLDYLDTFSPVAKIGTLRLLLAVAAAKQWSITHLDVSNAFLNGDLDEEIYMKLPQGYEELTGKKVPPNSVCRLHKSLY 852
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A2K3JLR7_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JLR7_TRIPR) HSP 1 Score: 63.2 bits (152), Expect = 1.120e-10 Identity = 36/101 (35.64%), Postives = 52/101 (51.49%), Query Frame = 0
Query: 2 LYNRKVGQDGKVDKYKCRLTEK-------------YSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQ-KFPGPVGRLNKTLY 88
+Y K G+V+KYK RL K ++P ++ LL+ + AK EL D AFL D++EE+YM++P+ YQ G V RL K+LY
Sbjct: 31 VYKVKYKASGEVEKYKARLVAKGFTQIEGEDFNETFAPVAKMTTVRCLLSVAVAKGWELHQMDVSNAFLHGDLEEEVYMQVPDGYQVPKEGMVCRLRKSLY 131
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5JSV1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV1_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 1.370e-10 Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 0
Query: 22 EKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY 88
E Y+PT + +S+ +L A + ++ LRH D +QAF+ +D+DE+++M +PE+ + G V RLNK+LY
Sbjct: 604 ETYAPTEAVSSVRLLAAMACEQNLSLRHIDIKQAFVPSDLDEDVFMRLPEDCGRLSGKVVRLNKSLY 670
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5KRJ6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ6_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 2.450e-10 Identity = 27/67 (40.30%), Postives = 48/67 (71.64%), Query Frame = 0
Query: 22 EKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY 88
E Y+PT + +S+ +L A + ++ LRHFD +QAF+++D+DE+++M +PE + G + +LNK+LY
Sbjct: 191 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLY 257
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 2.450e-10 Identity = 27/67 (40.30%), Postives = 48/67 (71.64%), Query Frame = 0
Query: 22 EKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY 88
E Y+PT + +S+ +L A + ++ LRHFD +QAF+++D+DE+++M +PE + G + +LNK+LY
Sbjct: 10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLY 76
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Match: A0A6H5KSD7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD7_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 2.530e-10 Identity = 27/67 (40.30%), Postives = 48/67 (71.64%), Query Frame = 0
Query: 22 EKYSPTPSTASILMLLATSAAKDGELRHFDAEQAFLKADIDEELYMEIPEEYQKFPGPVGRLNKTLY 88
E Y+PT + +S+ +L A + ++ LRHFD +QAF+++D+DE+++M +PE + G + +LNK+LY
Sbjct: 184 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLY 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56191.13064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig56191.13064.1 ID=prot_H-elongata_contig56191.13064.1|Name=mRNA_H-elongata_contig56191.13064.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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