mRNA_H-elongata_contig5605.13039.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5605.13039.1
Unique NamemRNA_H-elongata_contig5605.13039.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5605.13039.1 vs. uniprot
Match: D7FSK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK6_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 6.060e-54
Identity = 147/385 (38.18%), Postives = 198/385 (51.43%), Query Frame = 1 
Query: 1765 GKIAVARLGTTSGTDSAEVFVSVSDVGRRVLIEARDFDGGPVLASSTVSLELWTVTTGVPLLRPPTNQKAFRERLEDQLPALLGAGCSSRTERCAKKRVAIQAQPRRME-RLRDGLWRCSDIDRASEKAKINH-NANELGFESASDIRARASLSATKTITSLGTELLTEKRALRLEMLNRMIEEFHIKHGR----------LDERTGRIIAVKGPDDG-DRTTA-------DRSRGNFAAEKARS-----------TGEAEPKIDNGGCKGGGKGHGRRCIHAHRKCGFCRVKEVRRLLSPAKPKRRLGLGLGASQDHASMVPATKTRQEDXXXXXXXXXXXXXXXXXXXXDDNTDFKCDGCGRLINGTDDRFHCETCGDYDLCQ 2826
            G + +ARLG+     +  VFV V+D GRR+LIEARDF+ GP+LA STVSLE WT TTG+  L PPT+ +AF++ LE+QL ALLGAG  SRT R  +KR A +AQ +    R R  L   S++    EK ++     ++ G E+      R        ++   +  L +KRALRLEML RM+++FH KHGR            E+ G  +    P D  D TT        + + G    E+ R             GE +P I       GG+GHGR+C H  R+CGFCRV+EVRR+L    P R       +       +P  K   +                     +++ +F+CD CGR+I  T DRFHCETCGDYDL Q
Sbjct:    2 GTVPIARLGS----HAEGVFVVVTDGGRRLLIEARDFERGPLLAKSTVSLEDWTATTGIATLSPPTDNRAFKKILEEQLAALLGAGFRSRTSRLERKRAAREAQQQGGGVRWRGTLLELSEM----EKGRLGQLEEDDNGSENNDANPDRPPPKLPLLLSPRDSTPLEQKRALRLEMLTRMVDDFHAKHGRSRRXXXXXXXXXEKRG--VGAPAPGDARDPTTVVATGCDDESAVGGHDGERVREGPVHIVSNEGQDGENDPHITTANQAKGGRGHGRKCEHTFRRCGFCRVEEVRRVLGIRAPGRTREPVQESMVVRVPSLPQLKFGDDQDDDNEEEDFEWVTDSD----EEDPEFECDSCGRVIEDTSDRFHCETCGDYDLMQ 372
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BLAST of mRNA_H-elongata_contig5605.13039.1 vs. uniprot
Match: A0A6H5KMB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB6_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 7.740e-43
Identity = 131/363 (36.09%), Postives = 177/363 (48.76%), Query Frame = 1 
Query: 1030 VVKANGGTLTISLCKASAEVVSLYNLWE--------AGKWNRTGCIPRKIRRGRARYKRQWVTLQASWRDWEGLGYGPLQWMSHVQKKHLGMLALSWVSFETGDR--------------ISQKTDKTYFKAFLQFRPILARVRRIVEISTKV--------------------------AIATATVEEGEGVWG--------RVMVRDDGRVFEVEV-EAEGQGLPLDRRWL----RSFGEETWEETGLGKLLWMDWMWRRYLATCLSHQVALSTSTVTTNGCRTLDESGKRDI---IIIQTRLPLLLWSGKIAVARLGTTSGTDSAEVFVSVSDVGRRVLIEARDFDGGPVLASSTVSLELWT 1926
            +VKA GG LT+SL + S    S              A   N +G        GRA  +R  +TL A+W DW   GYGPLQWMSH QK  +  L+L WVSF T  R              +  +  +T  +AFL F PIL+ V R V  S+                              +      G  ++G        RV+VRD+G V  VEV EAE + +   +  +    ++FG+E+W ETGLG+LLW+D   R+YLA  L+ QVA+             D+     I   ++I + LPL  W G + +ARLG+     +  VFV ++D GRR+LIEARDF+GGP+LA STVSLE WT
Sbjct:    1 MVKATGGELTLSLFQPSRAAPSTGGTTRPAGVRGRGAAAANGSGVHSTAGDPGRAAMRRS-LTLVAAWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRTPARGFEEKNAPNANETPVRHRRRRTTKEAFLHFHPILSSVTRDVGKSSGAPGSSVRGTGXXXXXXXXXXXXXXXXXTSSRTAPRGGSEIFGGEETSRTSRVLVRDEGGVLRVEVVEAERKNVGRSKSGVSMLDQAFGKESWRETGLGELLWLDCSCRQYLALRLAQQVAIVVDDDRDGRGGQHDQDNVLKIKPRLVIISDLPLPYWMGTVPIARLGS----HAEGVFVMITDAGRRLLIEARDFEGGPLLAKSTVSLEDWT 358
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5605.13039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSK6_ECTSI6.060e-5438.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMB6_9PHAE7.740e-4336.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5605contigH-elongata_contig5605:2517..8972 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-04_000340.1
Exons10
Model size2958
Cds size2358
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930912.5277798-CDS-H-elongata_contig5605:2516..26541622930912.5277798-CDS-H-elongata_contig5605:2516..2654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 2517..2654 -
1691679621.9302225-CDS-H-elongata_contig5605:2516..26541691679621.9302225-CDS-H-elongata_contig5605:2516..2654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 2517..2654 -
1622930912.544315-CDS-H-elongata_contig5605:3058..32621622930912.544315-CDS-H-elongata_contig5605:3058..3262Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 3059..3262 -
1691679621.9395864-CDS-H-elongata_contig5605:3058..32621691679621.9395864-CDS-H-elongata_contig5605:3058..3262Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 3059..3262 -
1622930912.5633686-CDS-H-elongata_contig5605:3556..36931622930912.5633686-CDS-H-elongata_contig5605:3556..3693Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 3557..3693 -
1691679621.9518964-CDS-H-elongata_contig5605:3556..36931691679621.9518964-CDS-H-elongata_contig5605:3556..3693Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 3557..3693 -
1622930912.5802002-CDS-H-elongata_contig5605:3882..42161622930912.5802002-CDS-H-elongata_contig5605:3882..4216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 3883..4216 -
1691679621.960043-CDS-H-elongata_contig5605:3882..42161691679621.960043-CDS-H-elongata_contig5605:3882..4216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 3883..4216 -
1622930912.5971234-CDS-H-elongata_contig5605:4654..48721622930912.5971234-CDS-H-elongata_contig5605:4654..4872Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 4655..4872 -
1691679621.9683676-CDS-H-elongata_contig5605:4654..48721691679621.9683676-CDS-H-elongata_contig5605:4654..4872Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 4655..4872 -
1622930912.6209161-CDS-H-elongata_contig5605:5142..54161622930912.6209161-CDS-H-elongata_contig5605:5142..5416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 5143..5416 -
1691679621.9818747-CDS-H-elongata_contig5605:5142..54161691679621.9818747-CDS-H-elongata_contig5605:5142..5416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 5143..5416 -
1622930912.6341305-CDS-H-elongata_contig5605:5710..65981622930912.6341305-CDS-H-elongata_contig5605:5710..6598Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 5711..6598 -
1691679622.0030665-CDS-H-elongata_contig5605:5710..65981691679622.0030665-CDS-H-elongata_contig5605:5710..6598Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 5711..6598 -
1622930912.6487978-CDS-H-elongata_contig5605:6960..71251622930912.6487978-CDS-H-elongata_contig5605:6960..7125Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 6961..7125 -
1691679622.014953-CDS-H-elongata_contig5605:6960..71251691679622.014953-CDS-H-elongata_contig5605:6960..7125Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5605 6961..7125 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930912.6670873-UTR-H-elongata_contig5605:7125..74911622930912.6670873-UTR-H-elongata_contig5605:7125..7491Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5605 7126..7491 -
1691679622.0250053-UTR-H-elongata_contig5605:7125..74911691679622.0250053-UTR-H-elongata_contig5605:7125..7491Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5605 7126..7491 -
1622930912.6858068-UTR-H-elongata_contig5605:7769..79261622930912.6858068-UTR-H-elongata_contig5605:7769..7926Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5605 7770..7926 -
1691679622.0363832-UTR-H-elongata_contig5605:7769..79261691679622.0363832-UTR-H-elongata_contig5605:7769..7926Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5605 7770..7926 -
1622930912.6999736-UTR-H-elongata_contig5605:8895..89721622930912.6999736-UTR-H-elongata_contig5605:8895..8972Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5605 8896..8972 -
1691679622.0491502-UTR-H-elongata_contig5605:8895..89721691679622.0491502-UTR-H-elongata_contig5605:8895..8972Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5605 8896..8972 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5605.13039.1prot_H-elongata_contig5605.13039.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5605 2517..7125 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5605.13039.1

>prot_H-elongata_contig5605.13039.1 ID=prot_H-elongata_contig5605.13039.1|Name=mRNA_H-elongata_contig5605.13039.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=786bp
MRQDWLVMGFPTLRWLDGRNRVALAEHLVRCIHARDGSLAVNCGERVLRS
DIFFPQISLGGDRHSASPATIVHPLDPRGAAREDRGGAIWDTCPSGAPSG
LCSCRVVMRIGASLPLSETAFVYGEDEQHPLSLGLGRGNRWLAVVKANGG
TLTISLCKASAEVVSLYNLWEAGKWNRTGCIPRKIRRGRARYKRQWVTLQ
ASWRDWEGLGYGPLQWMSHVQKKHLGMLALSWVSFETGDRISQKTDKTYF
KAFLQFRPILARVRRIVEISTKVAIATATVEEGEGVWGRVMVRDDGRVFE
VEVEAEGQGLPLDRRWLRSFGEETWEETGLGKLLWMDWMWRRYLATCLSH
QVALSTSTVTTNGCRTLDESGKRDIIIIQTRLPLLLWSGKIAVARLGTTS
GTDSAEVFVSVSDVGRRVLIEARDFDGGPVLASSTVSLELWTVTTGVPLL
RPPTNQKAFRERLEDQLPALLGAGCSSRTERCAKKRVAIQAQPRRMERLR
DGLWRCSDIDRASEKAKINHNANELGFESASDIRARASLSATKTITSLGT
ELLTEKRALRLEMLNRMIEEFHIKHGRLDERTGRIIAVKGPDDGDRTTAD
RSRGNFAAEKARSTGEAEPKIDNGGCKGGGKGHGRRCIHAHRKCGFCRVK
EVRRLLSPAKPKRRLGLGLGASQDHASMVPATKTRQEDGTGNNYSEDEEE
YEWITDTDDDNTDFKCDGCGRLINGTDDRFHCETCGDYDLCQVCFLSHEA
LRGHVSTDEARHASNNHLSSHVVTHITGKPILTPI*
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mRNA from alignment at H-elongata_contig5605:2517..8972-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5605.13039.1 ID=mRNA_H-elongata_contig5605.13039.1|Name=mRNA_H-elongata_contig5605.13039.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6456bp|location=Sequence derived from alignment at H-elongata_contig5605:2517..8972- (Himanthalia elongata Himel1 dioecious)
ATGGAGGGCTCTGGCCTGACAGTCTTGTCTGAAAGCGAGCGGAAAGAGCT
TATCAATTCAATAGGGAAAAGACTCAGGTGGGCAAGGAAAAGCGAGCGGC
GTTGATGGCGCAAATAAAAAACGAGAAGAAGTTGTGTGTTTTTGTGTTGG
TGAGACTTAGCAAATGGGATATGTCTACTGGTCTCAGGATCACGAGGCTG
CCACGGGCCCTCAGCAATGTACAGCGCGAAATGTGGTTATGCCCTTGTGC
CGTTGCTTCTTGGCGGGCCACACATTACGCGTGGCGTTTGTTTGCAAGGG
TGGTGCCTCGGTACATCTCATACTATTAATGTGTCATTCGTTTTCTCTCC
GTGCACCAGACTGTTATTCGACATTTTCGGGGGGAAACAACTGATCAAAT
ATTGACATTGTCAATTACAGAAACGGACGTTATATGCTCATCGTTTCACT
CTTTTTGATAGAAGAACCCTTCGGGGGATTATCGCAATCCTGTCCCGGGG
GAGGTTGATAGCATTGTCATGAGGGGATCTGATAGCATTGTCCCGGGGGA
TTTGATAGCATTGTCCCGGGGGGGTGTCTGATAGTATTGTGTCGTGAGTG
TTGGCGTTTGCACGGTCCGGGTTTGGTTGCTTATGTTATAATTTGTTCGG
GTTCATGCGATAGTATTGCCGCGGGAATTGCGTAGTAATATCGTGGGGAT
CTCGTATTATTGTACCTAAAGAAAGAGGTTTTCTCTTAGCCCTCTCCGAA
CCCTTTTTCGTTGTAATTCCAATTAGATATTTGGTCCGACGTTCTAACAA
TAAAGGGTGCATGTTCTCATTAGGTCAACATAATTTATGTGTGTGTGTGT
GTGGGGACATGCGAACTATGACTTCATCAGCGCTTTTGATTCGTCGGTCA
AGAAATATAACCGAAGTGGCTTATAGCTTATACCCTAGTGATAGTAAATC
ACATTTTCTGGAAGCTGTTACAAAAGGCGCAATAGGACCCCGAATGCCAT
GGTAGCCTTTTTGCGTCTGCGACACGACGCTCTTTGATCTCATCAGGGTA
TCGGACGGCATCTTGACTATGGATGTCAGCGCCGGCGCGCAAGAAGAAGG
CATGAATATACAGTCTAATTCTTTGCTCCAAGGGCGAGGTGGCTTCGAAG
CCGATCCTTCTATCTACACCGCGCACCGCATGTTGGAGGGTGTCGCGATC
AAGGTGAGGAGGGAAGATGGCTAAAATCTGGTCGCTTGATTGGCTGCGGT
GGCTGTGGAACCATCATCCGCCTTATCGTAATTCTCCACTGTACTATCAG
TGACATACATCAGGCATTATCATGCTTTTTCGACCCTCGAGACGCCTGTG
AGAGGGGTAGCTGGTCGTCTGGTCGTCGAAGCGTAAGGTAGCGACAAATT
GTGATCACATGATTCACCATAGGCGTCGGCGCATCACCGATGAGAGGTAA
ATCCGGTGCGCCTGACACCGTGACATCCCAGGTTTCAGTGCAGCTGGAGA
GTGTGGACAACCTTTTGATTCGGATGCGAACGCTGCCACCTGAACCGGAG
CGTTCTGAGGATATTATCGCGCAACCGGAGGCGAGCTTTTTCCCGTGATT
TCTCGGTGATCGTAAGTTGGTTTGGGGTTGTAGTGGTATGTAACATCCGC
TGGTGTTGCTCACGAGCTGCTGTAGTCGTCGGCTGCACAGTTCTCTTGGG
GTTAAAATGTGACCACGCCGCCATCAATTCTGCGCTCTTGATGTGTTATA
ATGGCATCTGATATACATTGTACAAAGGTTGCCGAAACTGAGCATTTGCG
TGACACCATGCTCCCGATGCCTCTGGTGACCCGCTGTGACCTCGTGGATG
CGCCAGGATTGGTTAGTAATGGGGTTTCCTACCTTGCGTTGGCTTGACGG
TCGCAATCGGGTTGCTCTAGCTGAGCATCTGGTACGCTGCATACACGCTA
GGGATGGCAGCCTCGCGGTCAATTGTGGCGAGCGAGTGTTGCGATCTGAT
ATTTTTTTCCCGGTGAGCCGCTGATGAGGATCGATACTTGACCCTTGATA
AGGCCATGATGGGTAACCAGTAATGCGGTGATGCACATGTCAGTGTAAGC
CTACCTTGAAAAATAGTATTAAACAGGAACAAAGCCACGATGGGCACCGC
TAATCATTGCCACTGAAGGAGCGAGTGGGTCAGCACCAACCCTAACCCAA
AACATCACTGCTCCATTAGAGGACTCCGACAAAAACATGATTCTATTGCG
GACACATGAAGCTCGTCCACAACGACATAAATAAAAATGGTTTTGCTCTA
AAGCACCCTGAAAAATAAGCGCTTGATGAAAACCCATCGAATACACTCGC
TGCTTGACAAACCCTTGGACGAAGCAGATTTCCCTTGGAGGCGATCGCCA
CTCCGCGTCTCCCGCGACAATAGTTCACCCCTTGGATCCACGCGGAGCAG
CGAGGGAGGACAGGGGCGGTGCAATCTGGGATACATGCCCTTCCGGCGCG
CCTTCAGGACTGTGTTCCTGTCGAGTTGTGATGAGGATAGGTGCATCTCT
ACCACTCTCAGAAACAGCGTTTGTTTATGGTGAAGATGAGCAGCACCCTC
TCAGCTTGGGATTGGGGCGTGGCAATCGCTGGCTAGCCGTAGTTAAGGCA
AACGGAGGTACGCTAACGATATCTCTCTGCAAGGCGTCGGCCGAAGTGGT
ATCACTTTACAACCTTTGGGAGGCTGGCAAGTGGAACAGGACTGGGTGTA
TACCAAGGAAGATCAGAAGAGGAAGAGCGAGATACAAACGGCAGTGGGTC
ACGCTGCAGGCATCGTGGAGGGACTGGGAAGGGCTTGGTTACGGCCCACT
GCAGTGGATGTCTCACGTTCAAAAAAAACATCTTGGCATGCTGGCGCTTT
CGTGGGTGTCTTTTGAAACGGGAGATCGCATATCTCAGAAAACGGATAAA
ACATACTTTAAAGCGTTTTTGCAGTTCCGACCGATTCTCGCGAGAGTACG
TCGGATCGTGGAGATCTCCACCAAAGTCGCAATCGCCACTGCCACCGTCG
AGGAGGGCGAGGGGGTATGGGGTCGGGTGATGGTCAGAGACGATGGTCGA
GTGTTCGAAGTCGAGGTGGAGGCTGAAGGTCAGGGTTTGCCCCTAGATCG
GCGGTGGCTGAGATCGTTCGGGGAGGAAACATGGGAAGAAACGGGTCTAG
GGAAGCTTCTCTGGATGGACTGGATGTGGCGGCGATACCTCGCTACTTGC
CTATCGCACCAGGTTGCTCCTTTTTGAGGTTGACGTCAGAATTAAAGGCC
AACGAAGAGGGTATTCCCAAGGATAAGCCATTCTTCGTGAACGGGAGCGT
CTACACCCCCTCAAACAATACACCGCTCGACTAAATGCACCATGTATATT
TGACGAGGCAAAGACGCACTGCATCCAATGCGCACCGTTACGCATGTCTT
CCAGTCGCTATCACCCACACCAGAATTGGAGGAACCACCCACACCAGAAT
TGGAGGGTTAGGGTTACCAACATCCCGCACCCTACAAAAATACTATCGTG
TTGCAGGTTGCACTCTCCACCTCCACCGTCACCACGAACGGTTGTCGCAC
ACTGGACGAATCCGGGAAGCGAGACATTATTATTATACAAACACGCTTAC
CCTTGTTGCTCTGGTCTGGAAAGATCGCTGTCGCTCGTCTCGGAACTACC
TCGGGTACTGATTCGGCGGAAGTATTTGTGAGCGTCTCTGATGTTGGGCG
TCGGGTGCTGATTGAGGCAAGAGACTTCGATGGCGGGCCCGTGCTTGCTT
CTTCAACGGTGTCTCTAGAACTTTGGACAGGTGACGTCACGAGGCATGGC
GTAATCATCCGTCGGTAAATCCTGAATTCCACGGCCAGACTATTAATGCC
AAAGTGTACGCGCCCATACAGCGAGGAGGGGCCTGAGGGTATGGCATTCA
TATGGGAACTTTTCGCTCAGCGGTACTCGCCGTTGTTGCGTAGTCTTTAT
CATAACTCGACAAAGGTATAAAGCTGTCATAGCATCCTCTATCTTTATCT
CTTGCTTGAGCACACCCTGCCTCATACGATTTCAAATATATCCGATCCAG
TGACCACTGGAGTTCCCTTGCTGAGGCCGCCCACCAATCAAAAGGCGTTC
CGAGAGAGACTCGAAGATCAACTACCTGCTCTCTTGGGTGCCGGATGCAG
CAGCCGCACCGAACGGTGTGCAAAGAAAAGAGTGGCCATACAGGCACAAC
CCCGCAGAATGGAAAGGCTGCGGGACGGGCTGTGGCGGTGTTCGGACATC
GACAGGGCCTCCGAGAAGGTGGAACAATTTATACTGGTAGATAATTAGAA
AACAGCTACAGTATATAACACGTGGAGAACATTGCAAGATATTTTTCGGG
GGGAGGTGGGGTGCTGCAGCAAGCTGCACGCCGCGTCCTCTCGGAAGACG
AGTAACGAGACGTGGAAGCCTTGGAAAATTCGTCGGCGCTAAATCAGTGT
GCGTGCTCTTCTTACGTAGGGGCTAAGCCACTGCACGCCATACATATAGC
TCAAGATTCGAGCGTTATTCTCAAATCATTTTTATTAAATTGTATAAGAC
CGCGCAAACCAACGCGTCGTGTAAGGGGGCACCGCATCGGCGTACGACCC
CCCCTCCAACCGCCCTATTGAATCCCTGCTCAAGATTTCCCACTCCCCTC
GTAATATTTTATGCGGTCCCATTGGTCATTTGTTTATCAACGCCGTTCGA
CTGCAGGCCAAGATCAATCATAACGCGAACGAGCTCGGCTTTGAGTCTGC
ATCGGATATACGGGCGCGCGCATCGTTGTCAGCGACGAAAACTATCACGT
CGCTCGGCACGGAGTTACTGACAGAGAAGAGGGCGTTAAGGCTCGAGATG
CTAAACAGAATGATTGAGGAGTTCCATATCAAGCACGGTCGTCTGGATGA
ACGCACGGGAAGGATCATTGCCGTCAAAGGGCCTGATGACGGTGATCGCA
CAACAGCAGACAGGTCAAGGGGAAACTTCGCTGCAGAAAAGGCCAGGTCT
ACGGGCGAAGCGGAGCCAAAAATAGATAACGGTGGGTGTAGTGACCAGGT
GGTTACGCTCCCAGCGATCGAAGAGGTCGACTTGGCAACCTCGCTCTCCA
GTTCTTCTCGACGCCTTTCAGCACCGACGATATCATCGCCTCACGATACA
CTCGACGAAAACGAGGCGTTTCAGGGCGGGGCAGGCAAACCCGTGCCCCC
TGCTGTAGTCGTTTGCGTGTGTTGTGGAGAAGGGGGTGGCAAGGGCCACG
GCCGGCGGTGCATCCATGCGCACCGAAAGTGCGGCTTTTGCAGGGTGAAA
GAAGTGAGGCGGTTGTTGTCTCCGGCGAAACCAAAGAGGCGACTCGGACT
CGGACTCGGCGCATCGGTGAGATGAGATGTTTTGCACGGTCAGGCCCGAT
CAAAAGCTTAATAATCTGGCTAGCCGATTGTAGCCCGAGATATCTACCTG
TTGGCTTGATGCAATATTATAGGTTAGAAGAGTAGGGAGAGTAATGGTAG
CAGTGCTATCCAATTTCTCCCCACGATTCTTCCACGCGTTGCGCTAGGCA
CCTATTGCGGTGAGTCGTTGTTCTACAGGAGCCCTGGCGAATCAAGCCAT
CCACGATTGTCGATACCTCTCAAGTCATTGTCGATAACAATTACAATTGC
GCCATCGCAGCAGGACCACGCGTCGATGGTTCCCGCAACCAAGACACGTC
AGGAGGACGGTACCGGTAACAATTATAGTGAGGACGAAGAGGAGTACGAA
TGGATCACGGATACGGACGATGATAATACCGACTTCAAGTGCGACGGATG
CGGAAGGCTGATCAATGGCACCGACGACCGCTTCCATTGCGAGACGTGTG
GCGACTACGACTTGGTAAGGTCCTACATAATATACTGCGTAACGCCCCCC
CACGCCCTACTCGACGCGTCGAACTGAGGCACATGGGATGATCGACGCTC
AACACAAGTCAGTCAATCTCCATTTTGAAGAATGATGATCAAAATTTCTC
CGGCACCAGTATCGCAAACGGCTAGTATTCTTTGGTTGTGCACACAAAAC
TAAGGCGGCCCAGAGCAATTGAAAAATCGGCAACGCCTTCGAAGGTATTA
CAAACCATTCCCATCGGAACTTTGCCACTTCCCCAAAGCGGCTCAGGGCC
GCCGACCACAATGCTCTCGCCCAATACGAATTCCATTAATTTCTGTTCTT
TTTTCGAATTAATTCAGCGACACTCTGTCCTTTCCAATCCATTGTTTTAC
CCTCCCTCGTGCGTTCAGTGCCAGGTATGCTTCCTTTCTCACGAGGCATT
ACGCGGACACGTCAGTACGGATGAGGCCAGGCATGCCTCCAATAACCACC
TCTCTTCCCACGTTGTGACGCACATCACGGGCAAACCTATATTGACCCCG
ATCTAG
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Coding sequence (CDS) from alignment at H-elongata_contig5605:2517..8972-

>mRNA_H-elongata_contig5605.13039.1 ID=mRNA_H-elongata_contig5605.13039.1|Name=mRNA_H-elongata_contig5605.13039.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4716bp|location=Sequence derived from alignment at H-elongata_contig5605:2517..8972- (Himanthalia elongata Himel1 dioecious)
ATGCGCCAGGATTGGTTAGTAATGGGGTTTCCTACCTTGCGTTGGCTTGA
CGGTCGCAATCGGGTTGCTCTAGCTGAGCATCTGGTACGCTGCATACACG
CTAGGGATGGCAGCCTCGCGGTCAATTGTGGCGAGCGAGTGTTGCGATCT
GATATTTTTTTCCCGATGCGCCAGGATTGGTTAGTAATGGGGTTTCCTAC
CTTGCGTTGGCTTGACGGTCGCAATCGGGTTGCTCTAGCTGAGCATCTGG
TACGCTGCATACACGCTAGGGATGGCAGCCTCGCGGTCAATTGTGGCGAG
CGAGTGTTGCGATCTGATATTTTTTTCCCGCAGATTTCCCTTGGAGGCGA
TCGCCACTCCGCGTCTCCCGCGACAATAGTTCACCCCTTGGATCCACGCG
GAGCAGCGAGGGAGGACAGGGGCGGTGCAATCTGGGATACATGCCCTTCC
GGCGCGCCTTCAGGACTGTGTTCCTGTCGAGTTGTGATGAGGATAGGTGC
ATCTCTACCACTCTCAGAAACAGCGTTTGTTTATGGTGAAGATGAGCAGC
ACCCTCTCAGCTTGGGATTGGGGCGTGGCAATCGCTGGCTAGCCGTAGTT
AAGGCAAACGGAGGTACGCTAACGATATCTCTCTGCAAGGCGTCGGCCGA
AGTGGTATCACTTTACAACCTTTGGGAGGCTGGCAAGTGGAACAGGACTG
GGTGTATACCAAGGAAGATCAGAAGAGGAAGAGCGAGATACAAACGGCAG
TGGGTCACGCTGCAGGCATCGTGGAGGGACTGGGAAGGGCTTGGTTACGG
CCCACTGCAGTGGATGTCTCACGTTCAAAAAAAACATCTTGGCATGCTGG
CGCTTTCGTGGGTGTCTTTTGAAACGGGAGATCGCATATCTCAGAAAACG
GATAAAACATACTTTAAAGCGTTTTTGCAGTTCCGACCGATTCTCGCGAG
AGTACGTCGGATCGTGGAGATCTCCACCAAAGTCGCAATCGCCACTGCCA
CCGTCGAGGAGGGCGAGGGGGTATGGGGTCGGGTGATGGTCAGAGACGAT
GGTCGAGTGTTCGAAGTCGAGGTGGAGGCTGAAGGTCAGGGTTTGCCCCT
AGATCGGCGGTGGCTGAGATCGTTCGGGGAGGAAACATGGGAAGAAACGG
GTCTAGGGAAGCTTCTCTGGATGGACTGGATGTGGCGGCGATACCTCGCT
ACTTGCCTATCGCACCAGCAGATTTCCCTTGGAGGCGATCGCCACTCCGC
GTCTCCCGCGACAATAGTTCACCCCTTGGATCCACGCGGAGCAGCGAGGG
AGGACAGGGGCGGTGCAATCTGGGATACATGCCCTTCCGGCGCGCCTTCA
GGACTGTGTTCCTGTCGAGTTGTGATGAGGATAGGTGCATCTCTACCACT
CTCAGAAACAGCGTTTGTTTATGGTGAAGATGAGCAGCACCCTCTCAGCT
TGGGATTGGGGCGTGGCAATCGCTGGCTAGCCGTAGTTAAGGCAAACGGA
GGTACGCTAACGATATCTCTCTGCAAGGCGTCGGCCGAAGTGGTATCACT
TTACAACCTTTGGGAGGCTGGCAAGTGGAACAGGACTGGGTGTATACCAA
GGAAGATCAGAAGAGGAAGAGCGAGATACAAACGGCAGTGGGTCACGCTG
CAGGCATCGTGGAGGGACTGGGAAGGGCTTGGTTACGGCCCACTGCAGTG
GATGTCTCACGTTCAAAAAAAACATCTTGGCATGCTGGCGCTTTCGTGGG
TGTCTTTTGAAACGGGAGATCGCATATCTCAGAAAACGGATAAAACATAC
TTTAAAGCGTTTTTGCAGTTCCGACCGATTCTCGCGAGAGTACGTCGGAT
CGTGGAGATCTCCACCAAAGTCGCAATCGCCACTGCCACCGTCGAGGAGG
GCGAGGGGGTATGGGGTCGGGTGATGGTCAGAGACGATGGTCGAGTGTTC
GAAGTCGAGGTGGAGGCTGAAGGTCAGGGTTTGCCCCTAGATCGGCGGTG
GCTGAGATCGTTCGGGGAGGAAACATGGGAAGAAACGGGTCTAGGGAAGC
TTCTCTGGATGGACTGGATGTGGCGGCGATACCTCGCTACTTGCCTATCG
CACCAGGTTGCACTCTCCACCTCCACCGTCACCACGAACGGTTGTCGCAC
ACTGGACGAATCCGGGAAGCGAGACATTATTATTATACAAACACGCTTAC
CCTTGTTGCTCTGGTCTGGAAAGATCGCTGTCGCTCGTCTCGGAACTACC
TCGGGTACTGATTCGGCGGAAGTATTTGTGAGCGTCTCTGATGTTGGGCG
TCGGGTGCTGATTGAGGCAAGAGACTTCGATGGCGGGCCCGTGCTTGCTT
CTTCAACGGTGTCTCTAGAACTTTGGACAGGTTGCACTCTCCACCTCCAC
CGTCACCACGAACGGTTGTCGCACACTGGACGAATCCGGGAAGCGAGACA
TTATTATTATACAAACACGCTTACCCTTGTTGCTCTGGTCTGGAAAGATC
GCTGTCGCTCGTCTCGGAACTACCTCGGGTACTGATTCGGCGGAAGTATT
TGTGAGCGTCTCTGATGTTGGGCGTCGGGTGCTGATTGAGGCAAGAGACT
TCGATGGCGGGCCCGTGCTTGCTTCTTCAACGGTGTCTCTAGAACTTTGG
ACAGTGACCACTGGAGTTCCCTTGCTGAGGCCGCCCACCAATCAAAAGGC
GTTCCGAGAGAGACTCGAAGATCAACTACCTGCTCTCTTGGGTGCCGGAT
GCAGCAGCCGCACCGAACGGTGTGCAAAGAAAAGAGTGGCCATACAGGCA
CAACCCCGCAGAATGGAAAGGCTGCGGGACGGGCTGTGGCGGTGTTCGGA
CATCGACAGGGCCTCCGAGAAGTGACCACTGGAGTTCCCTTGCTGAGGCC
GCCCACCAATCAAAAGGCGTTCCGAGAGAGACTCGAAGATCAACTACCTG
CTCTCTTGGGTGCCGGATGCAGCAGCCGCACCGAACGGTGTGCAAAGAAA
AGAGTGGCCATACAGGCACAACCCCGCAGAATGGAAAGGCTGCGGGACGG
GCTGTGGCGGTGTTCGGACATCGACAGGGCCTCCGAGAAGGCCAAGATCA
ATCATAACGCGAACGAGCTCGGCTTTGAGTCTGCATCGGATATACGGGCG
CGCGCATCGTTGTCAGCGACGAAAACTATCACGTCGCTCGGCACGGAGTT
ACTGACAGAGAAGAGGGCGTTAAGGCTCGAGATGCTAAACAGAATGATTG
AGGAGTTCCATATCAAGCACGGTCGTCTGGATGAACGCACGGGAAGGATC
ATTGCCGTCAAAGGGCCTGATGACGGTGATCGCACAACAGCAGACAGGTC
AAGGGGAAACTTCGCTGCAGAAAAGGCCAGGTCTACGGGCGAAGCGGAGC
CAAAAATAGATAACGGTGGGTGTAGCCAAGATCAATCATAACGCGAACGA
GCTCGGCTTTGAGTCTGCATCGGATATACGGGCGCGCGCATCGTTGTCAG
CGACGAAAACTATCACGTCGCTCGGCACGGAGTTACTGACAGAGAAGAGG
GCGTTAAGGCTCGAGATGCTAAACAGAATGATTGAGGAGTTCCATATCAA
GCACGGTCGTCTGGATGAACGCACGGGAAGGATCATTGCCGTCAAAGGGC
CTGATGACGGTGATCGCACAACAGCAGACAGGTCAAGGGGAAACTTCGCT
GCAGAAAAGGCCAGGTCTACGGGCGAAGCGGAGCCAAAAATAGATAACGG
TGGGTGTAAAGGGGGTGGCAAGGGCCACGGCCGGCGGTGCATCCATGCGC
ACCGAAAGTGCGGCTTTTGCAGGGTGAAAGAAGTGAGGCGGTTGTTGTCT
CCGGCGAAACCAAAGAGGCGACTCGGACTCGGACTCGGCGCATCGAAGGG
GGTGGCAAGGGCCACGGCCGGCGGTGCATCCATGCGCACCGAAAGTGCGG
CTTTTGCAGGGTGAAAGAAGTGAGGCGGTTGTTGTCTCCGGCGAAACCAA
AGAGGCGACTCGGACTCGGACTCGGCGCATCGCAGGACCACGCGTCGATG
GTTCCCGCAACCAAGACACGTCAGGAGGACGGTACCGGTAACAATTATAG
TGAGGACGAAGAGGAGTACGAATGGATCACGGATACGGACGATGATAATA
CCGACTTCAAGTGCGACGGATGCGGAAGGCTGATCAATGGCACCGACGAC
CGCTTCCATTGCGAGACGTGTGGCGACTACGACTTGCAGGACCACGCGTC
GATGGTTCCCGCAACCAAGACACGTCAGGAGGACGGTACCGGTAACAATT
ATAGTGAGGACGAAGAGGAGTACGAATGGATCACGGATACGGACGATGAT
AATACCGACTTCAAGTGCGACGGATGCGGAAGGCTGATCAATGGCACCGA
CGACCGCTTCCATTGCGAGACGTGTGGCGACTACGACTTGTGCCAGGTAT
GCTTCCTTTCTCACGAGGCATTACGCGGACACGTCAGTACGGATGAGGCC
AGGCATGCCTCCAATAACCACCTCTCTTCCCACGTTGTGACGCACATCAC
GGGCAAACCTATATTGACCCCGATCTAGTGCCAGGTATGCTTCCTTTCTC
ACGAGGCATTACGCGGACACGTCAGTACGGATGAGGCCAGGCATGCCTCC
AATAACCACCTCTCTTCCCACGTTGTGACGCACATCACGGGCAAACCTAT
ATTGACCCCGATCTAG
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