mRNA_H-elongata_contig55782.13011.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: D7G4U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U7_ECTSI) HSP 1 Score: 241 bits (614), Expect = 1.650e-77 Identity = 108/150 (72.00%), Postives = 126/150 (84.00%), Query Frame = 1
Query: 1 GRPWKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFM------HVIETTGLAGDVMLTHPLLLHAR 432
G PWK ALSP+LK+AVNQL GVD+WEEFGCGWWMVTFPGFA+PPWGA+G WH+DGAHFRHYPHSREIG++PIFLFSD+ GGGTA+LRGSHKKVA+ILW+R+GT GLTG + S R + V+ET G AGDV+LTHPLLLH+R
Sbjct: 106 GHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWDRAGTTGLTGPELSSAAREALLPAADDDVVETNGDAGDVLLTHPLLLHSR 255
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: F0XZZ7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZZ7_AURAN) HSP 1 Score: 198 bits (504), Expect = 1.200e-55 Identity = 97/177 (54.80%), Postives = 121/177 (68.36%), Query Frame = 1
Query: 1 GRPWKAALSPRLKAAVNQLLGVDAW---EEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--------VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPL 498
G PW S RL+AA++QL G W + GCGWW+VTFPG A PWGA+G+WHVDG + H SREIG++PIFLFSD+ +GGGTAL GSH+ VAE+LW R+G +G+ G + S R + V+ET G AGDVMLTHP LLHARS NL ++ ++VRFMCHPAV L
Sbjct: 634 GAPWAECWSDRLRAALDQLCGAGRWVDDDALGCGWWVVTFPGVANAPWGAEGSWHVDGHGYAHRVDSREIGVLPIFLFSDVAARGGGTALAPGSHRAVAELLW-RAGAEGVPGPRLSALAREALGAEALAGDAVVETRGRAGDVMLTHPFLLHARSKNLRDVDAAAVRFMCHPAVRL 809
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A662YJD1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJD1_9STRA) HSP 1 Score: 184 bits (468), Expect = 8.010e-55 Identity = 91/172 (52.91%), Postives = 114/172 (66.28%), Query Frame = 1
Query: 10 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 519
W L+PRLK A++QL G D WE+FGCGWWM+TFP AEPPW A G WHVDGA ++H+ S+E GL+ +FLFSDI P GGTAL GSHK +A +L ++ +G+ G S R F V+E G AGDVML HP LLHARS NL SVR MC+P V L + ++ +
Sbjct: 117 WDGVLTPRLKQAMDQLCGRDRWEDFGCGWWMITFPDQAEPPWEAAGKWHVDGAAYQHHLDSKESGLLAVFLFSDIAPGEGGTALSVGSHKWIARLL-EKNEPRGMKGGAVSFQARKFRREQVVEVNGKAGDVMLVHPFLLHARSKNLGQKGADSVRMMCNPNVRLHQKMNLN 287
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A3M6VBK7_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBK7_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.100e-54 Identity = 90/172 (52.33%), Postives = 117/172 (68.02%), Query Frame = 1
Query: 10 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 519
WK ++PRLK AV+QL G++ W++FG GWW++TFPG AEPPW A G WHVDGA ++H+ S+E GL+ IFLFSDI P GGTAL GSHK++A +L ++ +G+ G S R F V+E G AGDVML HP LLHARS NL + SVR MC+P V L ++ +
Sbjct: 91 WKDVVTPRLKQAVDQLCGINKWKDFGLGWWIITFPGQAEPPWEAAGKWHVDGATYQHHVDSQESGLLAIFLFSDIGPGEGGTALSVGSHKRIARML-KKNEPRGMKGGAVSYQARQFQRREVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVESVRIMCNPNVQLHRKMNLN 261
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A662X1L7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1L7_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.170e-54 Identity = 91/172 (52.91%), Postives = 113/172 (65.70%), Query Frame = 1
Query: 10 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 519
W L+PRLK A+NQL G D WE+FGCGWWM+TFP AE PW A G WHVDGA ++H+ S+E GL+ +FLFSDI P GGTAL GSHK +A +L ++ +G+ G S R F V+E G AGDVML HP LLHARS NL SVR MC+P V L + ++ +
Sbjct: 81 WDEVLTPRLKQAMNQLCGRDRWEDFGCGWWMITFPDQAESPWEAAGKWHVDGAAYQHHLDSKESGLLAVFLFSDIAPGEGGTALSVGSHKWIARLL-EKNEPRGMKGGAVSFQARKFRRERVVEVNGKAGDVMLVHPFLLHARSKNLGQKGADSVRMMCNPNVRLHQKMNLN 251
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A835YWK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK8_9STRA) HSP 1 Score: 184 bits (466), Expect = 2.040e-54 Identity = 93/176 (52.84%), Postives = 109/176 (61.93%), Query Frame = 1
Query: 1 GRPWKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH---------VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLK 501
G PW +PRL AA++QLLG AW +FG GWW TFPG + PPWGA G WHVDGAH P S E L+ I + SD+ +GGGTAL GSH+K A +LW G GL G + S + V+ET G AGDVML HPLLLHARS NLAP SVR MC+PAV L+
Sbjct: 63 GPPWSLVYTPRLAAALDQLLGAGAWRDFGLGWWFFTFPGVSAPPWGAAGHWHVDGAHLNRTPASPEGALILIVMLSDVAERGGGTALAVGSHRKAARLLWAHGGEGGLRGPRLSRLALAELMDEEGALRCPVVETRGKAGDVMLLHPLLLHARSKNLAP----SVRVMCNPAVSLR 234
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A329S5P2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S5P2_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.770e-53 Identity = 90/174 (51.72%), Postives = 116/174 (66.67%), Query Frame = 1
Query: 10 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFHVS 525
W ++PRLK A++Q+ G D WE+FG GWWM+TFP AEPPWGA G WHVDGA ++H+ S+E GL+ IFLFSDI P GGTAL GSHK +A +L ++ +G+ G S R F V E G AGDVML HP LLHARS NL SVR MC+P V L++ ++ +++
Sbjct: 91 WGDVVTPRLKRAMDQICGKDRWEDFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDSKESGLLVIFLFSDIGPGEGGTALSVGSHKWIAGLL-EKNEPRGMKGGAVSYQARQFQRREVAEVNGKAGDVMLVHPFLLHARSKNLGQKGAESVRIMCNPNVRLRQKMNLNLA 263
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A225VJ60_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VJ60_9STRA) HSP 1 Score: 176 bits (446), Expect = 7.980e-53 Identity = 88/172 (51.16%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 10 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 519
W ++PRLK A++Q+ G W++FG GWWMVTFP AEPPWG G WHVDGA ++H+ S+E GL+ IFLFSDI P GGTAL GSHK +A +L ++ +G+ G S R F V+E G AGDVML HP LLHARS NL + SVR MC+P V L ++ +
Sbjct: 12 WGDVVTPRLKRAMDQICGKSRWQDFGLGWWMVTFPDQAEPPWGEAGKWHVDGASYQHHVDSKESGLLLIFLFSDIGPGEGGTALSVGSHKWIARLL-EKNEPRGMKGGAVSYQARQFQRRQVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVESVRIMCNPNVELHHRMNLN 182
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A6G0W9P8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9P8_9STRA) HSP 1 Score: 178 bits (452), Expect = 9.210e-53 Identity = 92/179 (51.40%), Postives = 114/179 (63.69%), Query Frame = 1
Query: 1 GRPWKAALSPRLKAAVNQLLGVDAWEEFG--CGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMHV-----IETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDF 516
G PW L+PRLK+A++QL G D W E CGWW++TFPG A PWG G WHVDGAH+ H S+E GL+PIF+FSDI P GGTAL GSH VA IL + GL G K S +++++ +E G AGD+MLTHP L+HARS N S VRFMC+P V LK+ + F
Sbjct: 77 GEPWTEVLTPRLKSAMDQLCGKDRWNESDLVCGWWVITFPGHAMLPWGPAGHWHVDGAHYIHKLDSKESGLLPIFIFSDINPGDGGTALAPGSHMHVAHILQDAIPHGGLKGGKVSASAKSWVYQHKKAWVEVQGRAGDIMLTHPFLMHARSKNCG----SQVRFMCNPNVGLKDPMQF 251
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A0W8C4L5_PHYNI (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C4L5_PHYNI) HSP 1 Score: 178 bits (452), Expect = 1.120e-52 Identity = 89/172 (51.74%), Postives = 113/172 (65.70%), Query Frame = 1
Query: 10 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 519
W ++PRLK A++Q+ G D WE FG GWWM+TFP AEPPWGA G WHVDGA ++H+ ++E GL+ IFLFSDI P GGTAL GSHK VA +L ++ +G+ G S R F V+E G AGDV+L HP LLHARS NL + SVR MC+P V L ++ +
Sbjct: 95 WSDVVTPRLKRAMHQICGKDRWENFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDNKEAGLLLIFLFSDIGPGEGGTALSVGSHKWVARLL-QKNEPRGMKGGAVSYQARQFRRREVVEVNGKAGDVVLVHPFLLHARSKNLGQKGVESVRIMCNPNVRLHRRMNLN 265 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55782.13011.1 >prot_H-elongata_contig55782.13011.1 ID=prot_H-elongata_contig55782.13011.1|Name=mRNA_H-elongata_contig55782.13011.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp GRPWKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTback to top mRNA from alignment at H-elongata_contig55782:942..2060+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55782.13011.1 ID=mRNA_H-elongata_contig55782.13011.1|Name=mRNA_H-elongata_contig55782.13011.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1119bp|location=Sequence derived from alignment at H-elongata_contig55782:942..2060+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55782:942..2060+ >mRNA_H-elongata_contig55782.13011.1 ID=mRNA_H-elongata_contig55782.13011.1|Name=mRNA_H-elongata_contig55782.13011.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1050bp|location=Sequence derived from alignment at H-elongata_contig55782:942..2060+ (Himanthalia elongata Himel1 dioecious)back to top |