prot_H-elongata_contig55782.13011.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55782.13011.1
Unique Nameprot_H-elongata_contig55782.13011.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: D7G4U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U7_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.650e-77
Identity = 108/150 (72.00%), Postives = 126/150 (84.00%), Query Frame = 0
Query:    1 GRPWKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFM------HVIETTGLAGDVMLTHPLLLHAR 144
            G PWK ALSP+LK+AVNQL GVD+WEEFGCGWWMVTFPGFA+PPWGA+G WH+DGAHFRHYPHSREIG++PIFLFSD+   GGGTA+LRGSHKKVA+ILW+R+GT GLTG + S   R  +       V+ET G AGDV+LTHPLLLH+R
Sbjct:  106 GHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWDRAGTTGLTGPELSSAAREALLPAADDDVVETNGDAGDVLLTHPLLLHSR 255          
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: F0XZZ7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZZ7_AURAN)

HSP 1 Score: 198 bits (504), Expect = 1.200e-55
Identity = 97/177 (54.80%), Postives = 121/177 (68.36%), Query Frame = 0
Query:    1 GRPWKAALSPRLKAAVNQLLGVDAW---EEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--------VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPL 166
            G PW    S RL+AA++QL G   W   +  GCGWW+VTFPG A  PWGA+G+WHVDG  + H   SREIG++PIFLFSD+  +GGGTAL  GSH+ VAE+LW R+G +G+ G + S   R  +         V+ET G AGDVMLTHP LLHARS NL  ++ ++VRFMCHPAV L
Sbjct:  634 GAPWAECWSDRLRAALDQLCGAGRWVDDDALGCGWWVVTFPGVANAPWGAEGSWHVDGHGYAHRVDSREIGVLPIFLFSDVAARGGGTALAPGSHRAVAELLW-RAGAEGVPGPRLSALAREALGAEALAGDAVVETRGRAGDVMLTHPFLLHARSKNLRDVDAAAVRFMCHPAVRL 809          
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A662YJD1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJD1_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.010e-55
Identity = 91/172 (52.91%), Postives = 114/172 (66.28%), Query Frame = 0
Query:    4 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 173
            W   L+PRLK A++QL G D WE+FGCGWWM+TFP  AEPPW A G WHVDGA ++H+  S+E GL+ +FLFSDI P  GGTAL  GSHK +A +L  ++  +G+ G   S   R F    V+E  G AGDVML HP LLHARS NL      SVR MC+P V L + ++ +
Sbjct:  117 WDGVLTPRLKQAMDQLCGRDRWEDFGCGWWMITFPDQAEPPWEAAGKWHVDGAAYQHHLDSKESGLLAVFLFSDIAPGEGGTALSVGSHKWIARLL-EKNEPRGMKGGAVSFQARKFRREQVVEVNGKAGDVMLVHPFLLHARSKNLGQKGADSVRMMCNPNVRLHQKMNLN 287          
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A3M6VBK7_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBK7_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.100e-54
Identity = 90/172 (52.33%), Postives = 117/172 (68.02%), Query Frame = 0
Query:    4 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 173
            WK  ++PRLK AV+QL G++ W++FG GWW++TFPG AEPPW A G WHVDGA ++H+  S+E GL+ IFLFSDI P  GGTAL  GSHK++A +L  ++  +G+ G   S   R F    V+E  G AGDVML HP LLHARS NL    + SVR MC+P V L   ++ +
Sbjct:   91 WKDVVTPRLKQAVDQLCGINKWKDFGLGWWIITFPGQAEPPWEAAGKWHVDGATYQHHVDSQESGLLAIFLFSDIGPGEGGTALSVGSHKRIARML-KKNEPRGMKGGAVSYQARQFQRREVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVESVRIMCNPNVQLHRKMNLN 261          
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A662X1L7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1L7_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.170e-54
Identity = 91/172 (52.91%), Postives = 113/172 (65.70%), Query Frame = 0
Query:    4 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 173
            W   L+PRLK A+NQL G D WE+FGCGWWM+TFP  AE PW A G WHVDGA ++H+  S+E GL+ +FLFSDI P  GGTAL  GSHK +A +L  ++  +G+ G   S   R F    V+E  G AGDVML HP LLHARS NL      SVR MC+P V L + ++ +
Sbjct:   81 WDEVLTPRLKQAMNQLCGRDRWEDFGCGWWMITFPDQAESPWEAAGKWHVDGAAYQHHLDSKESGLLAVFLFSDIAPGEGGTALSVGSHKWIARLL-EKNEPRGMKGGAVSFQARKFRRERVVEVNGKAGDVMLVHPFLLHARSKNLGQKGADSVRMMCNPNVRLHQKMNLN 251          
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A835YWK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.040e-54
Identity = 93/176 (52.84%), Postives = 109/176 (61.93%), Query Frame = 0
Query:    1 GRPWKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH---------VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLK 167
            G PW    +PRL AA++QLLG  AW +FG GWW  TFPG + PPWGA G WHVDGAH    P S E  L+ I + SD+  +GGGTAL  GSH+K A +LW   G  GL G + S      +          V+ET G AGDVML HPLLLHARS NLAP    SVR MC+PAV L+
Sbjct:   63 GPPWSLVYTPRLAAALDQLLGAGAWRDFGLGWWFFTFPGVSAPPWGAAGHWHVDGAHLNRTPASPEGALILIVMLSDVAERGGGTALAVGSHRKAARLLWAHGGEGGLRGPRLSRLALAELMDEEGALRCPVVETRGKAGDVMLLHPLLLHARSKNLAP----SVRVMCNPAVSLR 234          
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A329S5P2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S5P2_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.770e-53
Identity = 90/174 (51.72%), Postives = 116/174 (66.67%), Query Frame = 0
Query:    4 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFHVS 175
            W   ++PRLK A++Q+ G D WE+FG GWWM+TFP  AEPPWGA G WHVDGA ++H+  S+E GL+ IFLFSDI P  GGTAL  GSHK +A +L  ++  +G+ G   S   R F    V E  G AGDVML HP LLHARS NL      SVR MC+P V L++ ++ +++
Sbjct:   91 WGDVVTPRLKRAMDQICGKDRWEDFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDSKESGLLVIFLFSDIGPGEGGTALSVGSHKWIAGLL-EKNEPRGMKGGAVSYQARQFQRREVAEVNGKAGDVMLVHPFLLHARSKNLGQKGAESVRIMCNPNVRLRQKMNLNLA 263          
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A225VJ60_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VJ60_9STRA)

HSP 1 Score: 176 bits (446), Expect = 7.980e-53
Identity = 88/172 (51.16%), Postives = 112/172 (65.12%), Query Frame = 0
Query:    4 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 173
            W   ++PRLK A++Q+ G   W++FG GWWMVTFP  AEPPWG  G WHVDGA ++H+  S+E GL+ IFLFSDI P  GGTAL  GSHK +A +L  ++  +G+ G   S   R F    V+E  G AGDVML HP LLHARS NL    + SVR MC+P V L   ++ +
Sbjct:   12 WGDVVTPRLKRAMDQICGKSRWQDFGLGWWMVTFPDQAEPPWGEAGKWHVDGASYQHHVDSKESGLLLIFLFSDIGPGEGGTALSVGSHKWIARLL-EKNEPRGMKGGAVSYQARQFQRRQVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVESVRIMCNPNVELHHRMNLN 182          
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A6G0W9P8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9P8_9STRA)

HSP 1 Score: 178 bits (452), Expect = 9.210e-53
Identity = 92/179 (51.40%), Postives = 114/179 (63.69%), Query Frame = 0
Query:    1 GRPWKAALSPRLKAAVNQLLGVDAWEEFG--CGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMHV-----IETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDF 172
            G PW   L+PRLK+A++QL G D W E    CGWW++TFPG A  PWG  G WHVDGAH+ H   S+E GL+PIF+FSDI P  GGTAL  GSH  VA IL +     GL G K S   +++++      +E  G AGD+MLTHP L+HARS N      S VRFMC+P V LK+ + F
Sbjct:   77 GEPWTEVLTPRLKSAMDQLCGKDRWNESDLVCGWWVITFPGHAMLPWGPAGHWHVDGAHYIHKLDSKESGLLPIFIFSDINPGDGGTALAPGSHMHVAHILQDAIPHGGLKGGKVSASAKSWVYQHKKAWVEVQGRAGDIMLTHPFLMHARSKNCG----SQVRFMCNPNVGLKDPMQF 251          
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Match: A0A0W8C4L5_PHYNI (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C4L5_PHYNI)

HSP 1 Score: 178 bits (452), Expect = 1.120e-52
Identity = 89/172 (51.74%), Postives = 113/172 (65.70%), Query Frame = 0
Query:    4 WKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGTWHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILWNRSGTKGLTGEKHSMCRRTFMH--VIETTGLAGDVMLTHPLLLHARSTNLAPIELSSVRFMCHPAVPLKEHLDFH 173
            W   ++PRLK A++Q+ G D WE FG GWWM+TFP  AEPPWGA G WHVDGA ++H+  ++E GL+ IFLFSDI P  GGTAL  GSHK VA +L  ++  +G+ G   S   R F    V+E  G AGDV+L HP LLHARS NL    + SVR MC+P V L   ++ +
Sbjct:   95 WSDVVTPRLKRAMHQICGKDRWENFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDNKEAGLLLIFLFSDIGPGEGGTALSVGSHKWVARLL-QKNEPRGMKGGAVSYQARQFRRREVVEVNGKAGDVVLVHPFLLHARSKNLGQKGVESVRIMCNPNVRLHRRMNLN 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55782.13011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4U7_ECTSI1.650e-7772.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0XZZ7_AURAN1.200e-5554.80Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A662YJD1_9STRA8.010e-5552.91Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A3M6VBK7_9STRA1.100e-5452.33Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A662X1L7_9STRA1.170e-5452.91Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A835YWK8_9STRA2.040e-5452.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A329S5P2_9STRA1.770e-5351.72Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A225VJ60_9STRA7.980e-5351.16Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A6G0W9P8_9STRA9.210e-5351.40Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0W8C4L5_PHYNI1.120e-5251.74Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008775Phytanoyl-CoA dioxygenasePFAMPF05721PhyHcoord: 6..148
e-value: 7.4E-8
score: 32.9
NoneNo IPR availableGENE3D2.60.120.620coord: 3..161
e-value: 8.8E-10
score: 40.0
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 4..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55782contigH-elongata_contig55782:942..2060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55782.13011.1mRNA_H-elongata_contig55782.13011.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55782 942..2060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55782.13011.1 ID=prot_H-elongata_contig55782.13011.1|Name=mRNA_H-elongata_contig55782.13011.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
GRPWKAALSPRLKAAVNQLLGVDAWEEFGCGWWMVTFPGFAEPPWGADGT
WHVDGAHFRHYPHSREIGLVPIFLFSDIVPQGGGTALLRGSHKKVAEILW
NRSGTKGLTGEKHSMCRRTFMHVIETTGLAGDVMLTHPLLLHARSTNLAP
IELSSVRFMCHPAVPLKEHLDFHVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase