prot_H-elongata_contig116417.1291.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: D8LGM6_ECTSI (RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM6_ECTSI) HSP 1 Score: 136 bits (342), Expect = 3.030e-38 Identity = 66/82 (80.49%), Postives = 74/82 (90.24%), Query Frame = 0
Query: 1 QESLQVCSSAKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAVFKVCGGGR 82
+ESL+V +AK+ M+ ANMRMVISIARKYQ++GVPL DLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQA+FKV G R
Sbjct: 73 EESLKVGGAAKKTMVEANMRMVISIARKYQHLGVPLTDLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAIFKVRAGRR 154
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: A0A6H5LBV0_9PHAE (RNA_pol_sigma70 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBV0_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.130e-35 Identity = 64/76 (84.21%), Postives = 72/76 (94.74%), Query Frame = 0
Query: 1 QESLQVCSSAKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAVFK 76
+ESL+VC +AK+ M+ ANMRMVISIARKYQ++GVPL DLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQA+FK
Sbjct: 331 EESLKVCGAAKKTMVEANMRMVISIARKYQHLGVPLTDLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAIFK 406
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: A0A7S2Y444_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y444_9STRA) HSP 1 Score: 105 bits (263), Expect = 7.700e-28 Identity = 47/67 (70.15%), Postives = 59/67 (88.06%), Query Frame = 0
Query: 10 AKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAVFK 76
AK+ M+++NMR+V+SIARKY N+GV L DL+QEGSLGL RA EKFDP +GFK STY++WWIQQAVF+
Sbjct: 8 AKQTMVQSNMRLVVSIARKYMNVGVSLHDLVQEGSLGLSRAAEKFDPLKGFKFSTYASWWIQQAVFR 74
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: A0A835YXH6_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH6_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.060e-27 Identity = 47/71 (66.20%), Postives = 61/71 (85.92%), Query Frame = 0
Query: 7 CSSAKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAVFKV 77
C AK AM+ +NMR+VI++A++Y MGVPL+DL+QEGSLGL+RA EK+DP +GFK STY+AWWIQQA+FK
Sbjct: 142 CLHAKHAMVSSNMRLVIAVAKRYGRMGVPLSDLVQEGSLGLIRAAEKYDPAKGFKFSTYAAWWIQQAIFKA 212
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: A0A1Z5JZN1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZN1_FISSO) HSP 1 Score: 112 bits (280), Expect = 4.130e-27 Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 0
Query: 2 ESLQVCSSAKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAVFK 76
E + C AK+ M+++NMR+V+SIARKY N+GV L DLIQEGSLGL RA EKFDP++GFK STY++WWIQQAVF+
Sbjct: 375 ELMMTCREAKQKMVQSNMRLVVSIARKYSNVGVGLQDLIQEGSLGLSRAAEKFDPKKGFKFSTYASWWIQQAVFR 449
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: A0A835ZEC7_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC7_9STRA) HSP 1 Score: 107 bits (268), Expect = 3.310e-26 Identity = 44/68 (64.71%), Postives = 61/68 (89.71%), Query Frame = 0
Query: 10 AKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAVFKV 77
AK AM+ +NMR+VI++A++Y MGVPL+DL+QEGSLGL+RA EK+DP++GF+ STY+AWWIQQA++K
Sbjct: 123 AKHAMVSSNMRLVIAVAKRYGRMGVPLSDLVQEGSLGLIRAAEKYDPDKGFRFSTYAAWWIQQAIYKA 190
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: A0A7S2XUY2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUY2_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.410e-26 Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 0
Query: 1 QESLQVCSSAKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAV 74
Q+ L +C A+ M+ NMR+VISIA+KYQN+GV L DLIQEG++GLVRA EKFDP+RGFK STY+AWWI+ AV
Sbjct: 157 QDELILCHEARSTMVEHNMRLVISIAKKYQNLGVSLQDLIQEGAMGLVRATEKFDPKRGFKFSTYAAWWIRHAV 230
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: B7FPT1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPT1_PHATC) HSP 1 Score: 107 bits (266), Expect = 3.600e-26 Identity = 47/75 (62.67%), Postives = 62/75 (82.67%), Query Frame = 0
Query: 2 ESLQVCSSAKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAVFK 76
E + AK+ M+++NMR+V+SIARKY N+GV L DL+QEGSLGL RA EKF+P++GFK STY++WWIQQAVF+
Sbjct: 63 EMVMTSREAKQRMVQSNMRLVVSIARKYSNVGVSLQDLVQEGSLGLSRAAEKFEPKKGFKFSTYASWWIQQAVFR 137
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: A0A7S2AXT5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXT5_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.770e-26 Identity = 49/67 (73.13%), Postives = 60/67 (89.55%), Query Frame = 0
Query: 10 AKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAVFK 76
AK+ MI +NMR+VISIAR+YQ++GV L DLIQEGSLGL+RA EKFDP RGF+ STY++WWIQQAVF+
Sbjct: 261 AKDVMINSNMRLVISIARRYQHLGVSLQDLIQEGSLGLIRASEKFDPSRGFRFSTYASWWIQQAVFR 327
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.160e-25 Identity = 49/69 (71.01%), Postives = 60/69 (86.96%), Query Frame = 0
Query: 9 SAKEAMIRANMRMVISIARKYQNMGVPLADLIQEGSLGLVRAVEKFDPERGFKLSTYSAWWIQQAVFKV 77
SAK+AMI +N+R+VISIA++YQ G+ L DLIQEGSLGLVRAVEKFDPE+GFK STYS WWI+QA+ +
Sbjct: 231 SAKKAMISSNLRLVISIAKRYQKRGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRA 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116417.1291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig116417.1291.1 ID=prot_H-elongata_contig116417.1291.1|Name=mRNA_H-elongata_contig116417.1291.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bpback to top |