prot_H-elongata_contig54763.12870.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig54763.12870.1
Unique Name	prot_H-elongata_contig54763.12870.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	158

Homology

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BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A6H5K1H6_9PHAE (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1H6_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 1.000e-61
Identity = 106/159 (66.67%), Postives = 128/159 (80.50%), Query Frame = 0

Query:    1 FSISSHAKVFTPGQLLAMSYEGSKLQISVDRVEIATIDP-DGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKPPGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 158
            F ++   +VFTP Q+LAM++EGSKL+I V  VE+ATID  +GQ       ++  R+ HG+L+  T IEW KPPG ++N EG  G G QN+IFRADFDFAKLGIGGLGKEF+QIFRRAFASR+F+S VVREMGI+HVRGMLL+GPPGCGKTLIARQIGKV
Sbjct:   57 FKVNFSHQVFTPNQVLAMTFEGSKLEIVVQSVEVATIDGREGQG-----FTSTHRNTHGMLNNQTDIEWTKPPGSMVNLEGQTGPGGQNIIFRADFDFAKLGIGGLGKEFSQIFRRAFASRIFNSAVVREMGISHVRGMLLYGPPGCGKTLIARQIGKV 210

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BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: B8BY63_THAPS (Vesicle-fusing ATPase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY63_THAPS)

HSP 1 Score: 154 bits (390), Expect = 8.270e-41
Identity = 85/162 (52.47%), Postives = 111/162 (68.52%), Query Frame = 0

Query:    1 FSISSHAKVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKPPGG----LLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 158
            F ++   +VF  GQ LAM +EG+KL++++  V    ID DG  P     S+   +  G L A T + + +P G     L+  + VGGSG  N IF +DFDF KLGIGGL  EFNQIFRRAFASR++ + V++++GI+HVRGMLL+GPPGCGKTLIARQIGKV
Sbjct:  132 FLLNFEGQVFEVGQTLAMDFEGTKLELTITAVN--QIDLDGGKPSAELVSSDDATRVGQLLAPTVLAFSRPHGSNLVALVGNKVVGGSGGANTIFLSDFDFEKLGIGGLDAEFNQIFRRAFASRIWPAHVIKQLGISHVRGMLLYGPPGCGKTLIARQIGKV 291

[Close]

BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A397CNA4_9STRA (Vesicle-fusing ATPase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CNA4_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.670e-39
Identity = 81/153 (52.94%), Postives = 101/153 (66.01%), Query Frame = 0

Query:    8 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKP---PGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGK 157
            +VF  GQLL +  +G+ +++SV +V++    PDG AP   Q      S  GL   G+A+ + K    P  L+N     G G  N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F   ++ +MGI HVRGMLL GPPGCGKTLIARQIGK
Sbjct:  145 QVFAAGQLLVVDVDGAPVKLSVSKVDLLA-PPDGVAPSSHQ------STMGLFVKGSALVFTKSKDAPVKLVNQGATAGGG--NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPAIIEKMGIKHVRGMLLFGPPGCGKTLIARQIGK 288

[Close]

BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A3L6VT92_9STRA (Vesicle-fusing ATPase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VT92_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.360e-38
Identity = 83/154 (53.90%), Postives = 102/154 (66.23%), Query Frame = 0

Query:    8 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKP---PGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 158
            +VF  GQLL +  +G+ +++SV +VE+    PDG AP   Q      S  GL   G+A+ + K    P  L+N     G G  N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F   ++ +MGI HVRGMLL GPPGCGKTLIARQIGKV
Sbjct:  145 QVFAAGQLLVVDVDGAPVKLSVSKVELLA-PPDGVAPSSHQ------STMGLFVKGSALVFTKSKDAPVKLVNQGATAGGG--NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPAIIEKMGIKHVRGMLLFGPPGCGKTLIARQIGKV 289

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BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A835YZT3_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZT3_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.750e-38
Identity = 82/150 (54.67%), Postives = 96/150 (64.00%), Query Frame = 0

Query:    9 VFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKPPGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 158
            +F PGQ LAM + G+KL++ V+  E A    DG+ P             GL    TAI W  P G  L   G   SGA   I   DFDF KLGIGGL  EFNQIFRRAFASR++ + +V +MGINHVRGMLL+GPPGCGKTL+ARQIGKV
Sbjct:  128 MFMPGQELAMDHNGAKLKVIVEAAEHAI--NDGRKPRF-----------GLFLEATAINWSSPSGASLRLSGQK-SGAMRTIIPKDFDFVKLGIGGLNNEFNQIFRRAFASRIYPTHLVEQMGINHVRGMLLYGPPGCGKTLVARQIGKV 263

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BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A397A2Y9_9STRA (Vesicle-fusing ATPase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A2Y9_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.560e-37
Identity = 82/154 (53.25%), Postives = 102/154 (66.23%), Query Frame = 0

Query:    8 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKP---PGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 158
            +VF  GQLL +  +G+ +++SV +V++    PDG AP   Q      S  GL   G+A+ + K    P  L+N     G G  N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F   ++ +MGI HVRGMLL GPPGCGKTLIARQIGKV
Sbjct:  145 QVFAAGQLLVVDVDGAPVKLSVSKVDLLA-PPDGVAPSSHQ------STMGLFVKGSALVFTKSKDAPVKLVNQGATAGGG--NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPAIIEKMGIKHVRGMLLFGPPGCGKTLIARQIGKV 289

[Close]

BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A7S4HXN0_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HXN0_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.900e-36
Identity = 81/156 (51.92%), Postives = 102/156 (65.38%), Query Frame = 0

Query:    8 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVH-GLLDAGTAIEWMKPPGG-LLNFEG---VGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 158
            ++F  G  LAM +EG+KL+I+V  +        G   G  +R     +   G L   TA+ + K  G  LL  EG    GG G  + IF +DFDF KLGIGGL  EFN+IFRRAFASR++ S ++++MGINHVRGMLL+GPPGCGKTLIARQIGKV
Sbjct:  158 QIFEVGGTLAMDFEGTKLEITVKELGQVDAAHIGTRGGGHERVRPDLATQMGQLLGPTALSFSKAQGSTLLRLEGQKVAGGGGGASNIFLSDFDFEKLGIGGLDGEFNEIFRRAFASRIWPSHIIKQMGINHVRGMLLYGPPGCGKTLIARQIGKV 313

[Close]

BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A1Z5KLG0_FISSO (Vesicle-fusing ATPase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLG0_FISSO)

HSP 1 Score: 141 bits (356), Expect = 4.230e-36
Identity = 79/159 (49.69%), Postives = 101/159 (63.52%), Query Frame = 0

Query:    8 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRR--SVHGLLDAGTAIEWMKPPG-------GLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGK 157
            +V   GQ +A+ +EG+KL+I+V +  +A IDP  +              +  G L + T I + +  G       G    EG GG G  N IF  DFDF KLGIGGL  EFNQIFRRAFASR++ + ++++MGINHVRGMLL+GPPGCGKTLIARQIGK
Sbjct:  143 QVLATGQSMAIDFEGTKLEITVHK--LAAIDPQQRRKSKENTGEIPTLDTNMGQLVSSTQIRFKRAEGTTAFVLTGEFIVEGAGGGGGANSIFVNDFDFEKLGIGGLDAEFNQIFRRAFASRIWPAHIIKQMGINHVRGMLLYGPPGCGKTLIARQIGK 299

[Close]

BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A1V9Z555_9STRA (Vesicle-fusing ATPase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z555_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.090e-35
Identity = 78/154 (50.65%), Postives = 98/154 (63.64%), Query Frame = 0

Query:    8 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMK---PPGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 158
            + FTPGQ + +   G  +++ V +V++ T       P  P  +N      GL  AG+++ + K    P  LLN    GG    N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F   V+ ++GI HVRGMLL GPPGCGKTLIARQIGKV
Sbjct:  140 QAFTPGQFIVIDMAGKPVKMCVTKVDLLT------PPDAPPATNTLAPTVGLYVAGSSLSFTKGRDAPFKLLNQSASGGG---NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPSVIEKLGIKHVRGMLLFGPPGCGKTLIARQIGKV 284

[Close]

BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A024TZW1_9STRA (Vesicle-fusing ATPase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZW1_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.520e-35
Identity = 79/154 (51.30%), Postives = 100/154 (64.94%), Query Frame = 0

Query:    8 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKP---PGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 158
            +VF  GQLL +  +G+ ++++V +VE+    P+G  P  P   N      GL   G+++ + K    P  L+N     G G  N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F   ++  MGI HVRGMLL GPPGCGKTLIARQIGKV
Sbjct:  145 QVFAAGQLLVVDVDGAPVKLAVTKVELLA-PPEGVVP--PSNPNPLVPTVGLFVKGSSLVFTKSKDAPVKLVNQGATAGGG--NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPAIIERMGIKHVRGMLLFGPPGCGKTLIARQIGKV 293

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot

BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K1H6_9PHAE	1.000e-61	66.67	Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=287...	[more]
B8BY63_THAPS	8.270e-41	52.47	Vesicle-fusing ATPase n=1 Tax=Thalassiosira pseudo...	[more]
A0A397CNA4_9STRA	2.670e-39	52.94	Vesicle-fusing ATPase n=1 Tax=Aphanomyces astaci T...	[more]
A0A3L6VT92_9STRA	1.360e-38	53.90	Vesicle-fusing ATPase n=3 Tax=Aphanomyces astaci T...	[more]
A0A835YZT3_9STRA	1.750e-38	54.67	Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxI...	[more]
A0A397A2Y9_9STRA	2.560e-37	53.25	Vesicle-fusing ATPase n=2 Tax=Aphanomyces astaci T...	[more]
A0A7S4HXN0_9STRA	1.900e-36	51.92	Vesicle-fusing ATPase (Fragment) n=1 Tax=Odontella...	[more]
A0A1Z5KLG0_FISSO	4.230e-36	49.69	Vesicle-fusing ATPase n=2 Tax=Fistulifera solaris ...	[more]
A0A1V9Z555_9STRA	1.090e-35	50.65	Vesicle-fusing ATPase n=1 Tax=Thraustotheca clavat...	[more]
A0A024TZW1_9STRA	1.520e-35	51.30	Vesicle-fusing ATPase n=3 Tax=Aphanomyces TaxID=10...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 138..156 e-value: 3.0E-5 score: 24.5
None	No IPR available	GENE3D	3.40.50.300		coord: 96..158 e-value: 2.9E-10 score: 42.2
IPR039812	Vesicle-fusing ATPase	PANTHER	PTHR23078	VESICULAR-FUSION PROTEIN NSF	coord: 6..157
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 96..157
IPR029067	CDC48 domain 2-like superfamily	SUPERFAMILY	54585	Cdc48 domain 2-like	coord: 8..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig54763	contig	H-elongata_contig54763:595..1068 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig54763.12870.1	mRNA_H-elongata_contig54763.12870.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig54763 595..1068 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig54763.12870.1 ID=prot_H-elongata_contig54763.12870.1|Name=mRNA_H-elongata_contig54763.12870.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
FSISSHAKVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRS
NFRRSVHGLLDAGTAIEWMKPPGGLLNFEGVGGSGAQNVIFRADFDFAKL
GIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTL
IARQIGKV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003959	ATPase_AAA_core
IPR039812	Vesicle-fus_ATPase
IPR027417	P-loop_NTPase
IPR029067	CDC48_domain_2-like_sf