mRNA_H-elongata_contig54763.12870.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A6H5K1H6_9PHAE (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1H6_9PHAE) HSP 1 Score: 209 bits (533), Expect = 1.000e-61 Identity = 106/159 (66.67%), Postives = 128/159 (80.50%), Query Frame = 1
Query: 1 FSISSHAKVFTPGQLLAMSYEGSKLQISVDRVEIATIDP-DGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKPPGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 474
F ++ +VFTP Q+LAM++EGSKL+I V VE+ATID +GQ ++ R+ HG+L+ T IEW KPPG ++N EG G G QN+IFRADFDFAKLGIGGLGKEF+QIFRRAFASR+F+S VVREMGI+HVRGMLL+GPPGCGKTLIARQIGKV
Sbjct: 57 FKVNFSHQVFTPNQVLAMTFEGSKLEIVVQSVEVATIDGREGQG-----FTSTHRNTHGMLNNQTDIEWTKPPGSMVNLEGQTGPGGQNIIFRADFDFAKLGIGGLGKEFSQIFRRAFASRIFNSAVVREMGISHVRGMLLYGPPGCGKTLIARQIGKV 210
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: B8BY63_THAPS (Vesicle-fusing ATPase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY63_THAPS) HSP 1 Score: 154 bits (390), Expect = 8.270e-41 Identity = 85/162 (52.47%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 1 FSISSHAKVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKPPGG----LLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 474
F ++ +VF GQ LAM +EG+KL++++ V ID DG P S+ + G L A T + + +P G L+ + VGGSG N IF +DFDF KLGIGGL EFNQIFRRAFASR++ + V++++GI+HVRGMLL+GPPGCGKTLIARQIGKV
Sbjct: 132 FLLNFEGQVFEVGQTLAMDFEGTKLELTITAVN--QIDLDGGKPSAELVSSDDATRVGQLLAPTVLAFSRPHGSNLVALVGNKVVGGSGGANTIFLSDFDFEKLGIGGLDAEFNQIFRRAFASRIWPAHVIKQLGISHVRGMLLYGPPGCGKTLIARQIGKV 291
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A397CNA4_9STRA (Vesicle-fusing ATPase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CNA4_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.670e-39 Identity = 81/153 (52.94%), Postives = 101/153 (66.01%), Query Frame = 1
Query: 22 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKP---PGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGK 471
+VF GQLL + +G+ +++SV +V++ PDG AP Q S GL G+A+ + K P L+N G G N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F ++ +MGI HVRGMLL GPPGCGKTLIARQIGK
Sbjct: 145 QVFAAGQLLVVDVDGAPVKLSVSKVDLLA-PPDGVAPSSHQ------STMGLFVKGSALVFTKSKDAPVKLVNQGATAGGG--NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPAIIEKMGIKHVRGMLLFGPPGCGKTLIARQIGK 288
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A3L6VT92_9STRA (Vesicle-fusing ATPase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VT92_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.360e-38 Identity = 83/154 (53.90%), Postives = 102/154 (66.23%), Query Frame = 1
Query: 22 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKP---PGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 474
+VF GQLL + +G+ +++SV +VE+ PDG AP Q S GL G+A+ + K P L+N G G N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F ++ +MGI HVRGMLL GPPGCGKTLIARQIGKV
Sbjct: 145 QVFAAGQLLVVDVDGAPVKLSVSKVELLA-PPDGVAPSSHQ------STMGLFVKGSALVFTKSKDAPVKLVNQGATAGGG--NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPAIIEKMGIKHVRGMLLFGPPGCGKTLIARQIGKV 289
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A835YZT3_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZT3_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.750e-38 Identity = 82/150 (54.67%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 25 VFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKPPGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 474
+F PGQ LAM + G+KL++ V+ E A DG+ P GL TAI W P G L G SGA I DFDF KLGIGGL EFNQIFRRAFASR++ + +V +MGINHVRGMLL+GPPGCGKTL+ARQIGKV
Sbjct: 128 MFMPGQELAMDHNGAKLKVIVEAAEHAI--NDGRKPRF-----------GLFLEATAINWSSPSGASLRLSGQK-SGAMRTIIPKDFDFVKLGIGGLNNEFNQIFRRAFASRIYPTHLVEQMGINHVRGMLLYGPPGCGKTLVARQIGKV 263
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A397A2Y9_9STRA (Vesicle-fusing ATPase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A2Y9_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.560e-37 Identity = 82/154 (53.25%), Postives = 102/154 (66.23%), Query Frame = 1
Query: 22 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKP---PGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 474
+VF GQLL + +G+ +++SV +V++ PDG AP Q S GL G+A+ + K P L+N G G N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F ++ +MGI HVRGMLL GPPGCGKTLIARQIGKV
Sbjct: 145 QVFAAGQLLVVDVDGAPVKLSVSKVDLLA-PPDGVAPSSHQ------STMGLFVKGSALVFTKSKDAPVKLVNQGATAGGG--NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPAIIEKMGIKHVRGMLLFGPPGCGKTLIARQIGKV 289
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A7S4HXN0_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HXN0_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.900e-36 Identity = 81/156 (51.92%), Postives = 102/156 (65.38%), Query Frame = 1
Query: 22 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVH-GLLDAGTAIEWMKPPGG-LLNFEG---VGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 474
++F G LAM +EG+KL+I+V + G G +R + G L TA+ + K G LL EG GG G + IF +DFDF KLGIGGL EFN+IFRRAFASR++ S ++++MGINHVRGMLL+GPPGCGKTLIARQIGKV
Sbjct: 158 QIFEVGGTLAMDFEGTKLEITVKELGQVDAAHIGTRGGGHERVRPDLATQMGQLLGPTALSFSKAQGSTLLRLEGQKVAGGGGGASNIFLSDFDFEKLGIGGLDGEFNEIFRRAFASRIWPSHIIKQMGINHVRGMLLYGPPGCGKTLIARQIGKV 313
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A1Z5KLG0_FISSO (Vesicle-fusing ATPase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLG0_FISSO) HSP 1 Score: 141 bits (356), Expect = 4.230e-36 Identity = 79/159 (49.69%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 22 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRR--SVHGLLDAGTAIEWMKPPG-------GLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGK 471
+V GQ +A+ +EG+KL+I+V + +A IDP + + G L + T I + + G G EG GG G N IF DFDF KLGIGGL EFNQIFRRAFASR++ + ++++MGINHVRGMLL+GPPGCGKTLIARQIGK
Sbjct: 143 QVLATGQSMAIDFEGTKLEITVHK--LAAIDPQQRRKSKENTGEIPTLDTNMGQLVSSTQIRFKRAEGTTAFVLTGEFIVEGAGGGGGANSIFVNDFDFEKLGIGGLDAEFNQIFRRAFASRIWPAHIIKQMGINHVRGMLLYGPPGCGKTLIARQIGK 299
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A1V9Z555_9STRA (Vesicle-fusing ATPase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z555_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.090e-35 Identity = 78/154 (50.65%), Postives = 98/154 (63.64%), Query Frame = 1
Query: 22 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMK---PPGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 474
+ FTPGQ + + G +++ V +V++ T P P +N GL AG+++ + K P LLN GG N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F V+ ++GI HVRGMLL GPPGCGKTLIARQIGKV
Sbjct: 140 QAFTPGQFIVIDMAGKPVKMCVTKVDLLT------PPDAPPATNTLAPTVGLYVAGSSLSFTKGRDAPFKLLNQSASGGG---NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPSVIEKLGIKHVRGMLLFGPPGCGKTLIARQIGKV 284
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Match: A0A024TZW1_9STRA (Vesicle-fusing ATPase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZW1_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.520e-35 Identity = 79/154 (51.30%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 22 KVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSNFRRSVHGLLDAGTAIEWMKP---PGGLLNFEGVGGSGAQNVIFRADFDFAKLGIGGLGKEFNQIFRRAFASRLFDSVVVREMGINHVRGMLLHGPPGCGKTLIARQIGKV 474
+VF GQLL + +G+ ++++V +VE+ P+G P P N GL G+++ + K P L+N G G N IF+ DFDF+KLGIGGL KEFN IFRRAFASR+F ++ MGI HVRGMLL GPPGCGKTLIARQIGKV
Sbjct: 145 QVFAAGQLLVVDVDGAPVKLAVTKVELLA-PPEGVVP--PSNPNPLVPTVGLFVKGSSLVFTKSKDAPVKLVNQGATAGGG--NRIFKPDFDFSKLGIGGLDKEFNDIFRRAFASRVFPPAIIERMGIKHVRGMLLFGPPGCGKTLIARQIGKV 293 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54763.12870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig54763.12870.1 >prot_H-elongata_contig54763.12870.1 ID=prot_H-elongata_contig54763.12870.1|Name=mRNA_H-elongata_contig54763.12870.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp FSISSHAKVFTPGQLLAMSYEGSKLQISVDRVEIATIDPDGQAPGMPQRSback to top mRNA from alignment at H-elongata_contig54763:595..1068- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig54763.12870.1 ID=mRNA_H-elongata_contig54763.12870.1|Name=mRNA_H-elongata_contig54763.12870.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=474bp|location=Sequence derived from alignment at H-elongata_contig54763:595..1068- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig54763:595..1068- >mRNA_H-elongata_contig54763.12870.1 ID=mRNA_H-elongata_contig54763.12870.1|Name=mRNA_H-elongata_contig54763.12870.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=948bp|location=Sequence derived from alignment at H-elongata_contig54763:595..1068- (Himanthalia elongata Himel1 dioecious)back to top |