mRNA_H-elongata_contig11633.1285.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: D8LL03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL03_ECTSI) HSP 1 Score: 328 bits (842), Expect = 4.500e-108 Identity = 166/193 (86.01%), Postives = 177/193 (91.71%), Query Frame = 1
Query: 7 AYPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYGRGYSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGNEE 585
AYPALVVSLGSGVSIIKVDGPA+FKRVSGSSIGGGTYWGLCRLLT A+SYD+SL MAR+G SDK DMLVGDIYGRGYSKFQLSS TLASSFGK+GGM +P SGV+E+DL +SLLVMITMNIGQVAYLNA+L TRRIYFVGNFLR N +SGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSG EE
Sbjct: 334 AYPALVVSLGSGVSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTEATSYDESLDMARQGNSDKVDMLVGDIYGRGYSKFQLSSNTLASSFGKVGGMEAPGKPGSGVSEEDLVQSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEE 526
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: A0A835Z2M7_9STRA (Fumble-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M7_9STRA) HSP 1 Score: 286 bits (732), Expect = 5.990e-92 Identity = 142/194 (73.20%), Postives = 168/194 (86.60%), Query Frame = 1
Query: 4 EAYPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYGRGYSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGNEE 585
++YPALVVS+GSGVSI+KVDGPA+F+RVSGSSIGGGTYWGLCRLLTGA+ YD SL +A +GESD+ DMLVGDIYG GY+KFQLSS TLASSFGK+ P+ GVT +D++K+L+VM+TMNIGQVAYLNA+L+ TRRIYFVGNFLR N+IS Q+LA+AI YWS GEMEALF EHEGY GALG+FL SG E+
Sbjct: 304 QSYPALVVSIGSGVSILKVDGPAKFERVSGSSIGGGTYWGLCRLLTGATDYDDSLDLADQGESDRVDMLVGDIYGHGYNKFQLSSNTLASSFGKLVTKEDPRE---GVTNEDVSKALIVMVTMNIGQVAYLNAKLYDTRRIYFVGNFLRHNNISAQRLAYAIAYWSGGEMEALFFEHEGYLGALGAFLSSGYED 494
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: A0A7S1ZWH9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWH9_TRICV) HSP 1 Score: 228 bits (582), Expect = 2.050e-73 Identity = 114/190 (60.00%), Postives = 148/190 (77.89%), Query Frame = 1
Query: 1 SEAYPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYGR---GYSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGS 561
+EAYP L+V +G+GVSI++VDGP + +R+SGS+IGGGTYWGLCRLLT A S+D +L +A RG+ K DM+VGDIYG K L S +ASSFGK+ P ++G+ ++DL ++LL+M+T NIGQVAYLNARL+ T+RIYFVGNFLR+N +S ++LA+AI YWS GE EALFLEHEGY GALG+
Sbjct: 3 AEAYPHLLVMIGTGVSILRVDGPRRHERISGSTIGGGTYWGLCRLLTDAESFDHALRLAERGDPSKVDMMVGDIYGEDSDALEKLGLPSNVVASSFGKLVAKVDP---AAGLRQEDLARALLIMVTNNIGQVAYLNARLYGTKRIYFVGNFLRRNAVSQRRLAYAIHYWSGGENEALFLEHEGYFGALGA 189
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: B5YN27_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN27_THAPS) HSP 1 Score: 230 bits (586), Expect = 1.930e-72 Identity = 118/193 (61.14%), Postives = 150/193 (77.72%), Query Frame = 1
Query: 1 SEAYPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYGR---GYSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLM 570
S A+P L+VS+G+GVSI++VDGP Q +RVSGS+IGGGTYWGLCRLLTG+ S+ L++A +G+ K DM+VGDIYG+ K L S +ASSFGK+ +P S G+ E+DL ++LL+M+T NIGQVA+LNA+L +T RIYFVG FL+ N IS Q+LA AIDYWS+G MEALFLEHEGY GALGSFL+
Sbjct: 108 SNAFPYLLVSIGTGVSILRVDGPRQHERVSGSTIGGGTYWGLCRLLTGSDSFSDVLNLAMKGDPSKVDMMVGDIYGKDSNALEKIGLPSDVVASSFGKLVAKQNP---SEGIKEEDLARALLLMVTNNIGQVAHLNAQLHETSRIYFVGTFLQHNTISQQRLAHAIDYWSNGNMEALFLEHEGYFGALGSFLL 297
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: W7TXJ8_9STRA (Type II pantothenate kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ8_9STRA) HSP 1 Score: 239 bits (609), Expect = 1.870e-71 Identity = 119/192 (61.98%), Postives = 149/192 (77.60%), Query Frame = 1
Query: 10 YPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYGRGYSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGNEE 585
YP LVV++GSGVSI+KV+GP +++R+SGSS+GGGTYWGLCRLLTG S+D+ L +A G++ DM VGDIYGRGY KF LSS +ASSFGK+ P + E+D+ ++LL+MIT NIGQVAYLNA + + IYFVGNFLR N IS ++LA+AIDYWS+G+MEALFLEHEGY GALG+FL S E
Sbjct: 416 YPYLVVNIGSGVSILKVEGPGRYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDATMVDMTVGDIYGRGYDKFHLSSSVIASSFGKLATCHDP---GEVIREEDMARALLMMITGNIGQVAYLNAVIHRATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGALGAFLNSSYVE 604
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: A0A7S2XPQ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPQ7_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.600e-71 Identity = 115/191 (60.21%), Postives = 148/191 (77.49%), Query Frame = 1
Query: 10 YPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYGRG---YSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMS 573
YP L+V++G+GVSI++VDGP + +R+SGS+IGGGTYWGLCRLLT ++ L++A RG+ K DM+VGDIYG K L S +ASSFGK+ P +SG+ ++DL ++LL+M+T+NIGQV+YLNA+L KT RIYFVGNFLR N IS Q+LAFAIDYWS G+MEALFLEHEG GALG+FL+S
Sbjct: 91 YPYLLVTIGTGVSILRVDGPRKHERISGSTIGGGTYWGLCRLLTDVEDFEDVLNLAERGDPSKVDMMVGDIYGENSDALEKLGLPSHIVASSFGKLVAKQDP---ASGIKQEDLARALLLMVTINIGQVSYLNAQLHKTPRIYFVGNFLRHNSISQQRLAFAIDYWSKGKMEALFLEHEGNFGALGAFLLS 278
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: A0A7S0FNR1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNR1_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.910e-70 Identity = 112/184 (60.87%), Postives = 146/184 (79.35%), Query Frame = 1
Query: 31 LGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYGRG---YSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMS 573
+G+GVSI++VDGP Q +R+SGS+IGGGTYWGLCRLLT + S++ + +A +G+ K DM+VGDIYG+G K LS+ +ASSFGK+ +P + G+ ++DL ++LL+MIT NIGQVAYLNA+L KT+RIYFVGNFLR N IS Q+LAFAID+WS G+ EALFLEHEGY GALG+FL+S
Sbjct: 1 IGTGVSILRVDGPRQHERISGSTIGGGTYWGLCRLLTNSESFEDVIDLAEKGDPSKVDMMVGDIYGKGSDALEKLGLSANLVASSFGKLVAKQNP---AEGLEQEDLARALLLMITNNIGQVAYLNAQLHKTKRIYFVGNFLRHNVISQQRLAFAIDFWSGGKNEALFLEHEGYFGALGAFLLS 181
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: A0A1E7FXN7_9STRA (Fumble n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXN7_9STRA) HSP 1 Score: 226 bits (576), Expect = 5.270e-70 Identity = 115/198 (58.08%), Postives = 151/198 (76.26%), Query Frame = 1
Query: 1 SEAYPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYG---RGYSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGNEE 585
S AYP ++V++G+GVS+++VDGP Q +RVSGS+IGGGT+WGL RLLT S+ S+ +A +G+ K DM+VGDIYG K L++ +ASSFGK+ P S G+T++DL ++LL ++T NIGQVAYLNA+L T RIYFVG+FLR+N IS ++L++AIDYWS GEMEALFLEHEGY GALG+FLMS N E
Sbjct: 169 SSAYPYMLVTIGTGVSVLRVDGPRQHERVSGSTIGGGTFWGLMRLLTDVESFHDSMKLAEKGDLSKVDMMVGDIYGDNSEALEKLGLAANIVASSFGKLVSKDDP---SKGLTQEDLARALLSLVTNNIGQVAYLNAKLHNTPRIYFVGSFLRENMISQRRLSYAIDYWSKGEMEALFLEHEGYFGALGAFLMSQNIE 363
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: A0A7S0GF81_9STRA (Hypothetical protein n=4 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF81_9STRA) HSP 1 Score: 226 bits (576), Expect = 6.230e-70 Identity = 115/194 (59.28%), Postives = 147/194 (75.77%), Query Frame = 1
Query: 1 SEAYPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYG---RGYSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMS 573
S YP L+V++G+GVSI++VDGP Q++R+SGSSIGGGTYWGLCRLLT ++ L +A RG K DM+VGDIYG SK L S +ASSFGK+ P +SG+ ++DL ++LL+MIT NIGQVAYLNA+L T RIYFVGNFLR N +S ++L+++I YWS GEMEALFLEHEGY GALG+FL++
Sbjct: 152 SSTYPYLLVTIGTGVSILRVDGPRQYERISGSSIGGGTYWGLCRLLTDVEKFEDVLDLASRGNPTKCDMMVGDIYGDNPEALSKLGLPSNIVASSFGKLVAKQDP---ASGLKQEDLARALLLMITNNIGQVAYLNAQLHNTSRIYFVGNFLRHNKMSQRRLSYSIHYWSKGEMEALFLEHEGYFGALGAFLLN 342
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Match: A0A7S2CGZ6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CGZ6_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.010e-69 Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = 1
Query: 7 AYPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASSYDQSLHMARRGESDKADMLVGDIYGRGYSKFQLSSKTLASSFGKIGGMTSPKSSSSGVTEDDLTKSLLVMITMNIGQVAYLNARLFKTRRIYFVGNFLRQNHISGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGN 579
++P L+VS+GSGVSII+VD P ++RVSGSSIGGGT++GL RLLTG SSY+++L +A +G++ K DM+VGDIYGR Y K LSS +ASSFGK+ P+ +S +DL +SLL+M T NIGQVA LNA+ K RIYF+GNFLR N IS ++L++AIDYWS G MEALFLEHEGY GALG+F++S +
Sbjct: 154 SFPYLLVSIGSGVSIIRVDAPGVYQRVSGSSIGGGTFFGLARLLTGCSSYEEALALAEKGDATKCDMMVGDIYGRNYGKIGLSSDIVASSFGKLMSEKDPQGTS---RPEDLVRSLLLMTTNNIGQVALLNAQKEKCARIYFIGNFLRSNEISCRRLSYAIDYWSDGVMEALFLEHEGYFGALGAFMLSAH 341 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11633.1285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11633.1285.1 >prot_H-elongata_contig11633.1285.1 ID=prot_H-elongata_contig11633.1285.1|Name=mRNA_H-elongata_contig11633.1285.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp SEAYPALVVSLGSGVSIIKVDGPAQFKRVSGSSIGGGTYWGLCRLLTGASback to top mRNA from alignment at H-elongata_contig11633:4892..6903+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11633.1285.1 ID=mRNA_H-elongata_contig11633.1285.1|Name=mRNA_H-elongata_contig11633.1285.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2012bp|location=Sequence derived from alignment at H-elongata_contig11633:4892..6903+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11633:4892..6903+ >mRNA_H-elongata_contig11633.1285.1 ID=mRNA_H-elongata_contig11633.1285.1|Name=mRNA_H-elongata_contig11633.1285.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at H-elongata_contig11633:4892..6903+ (Himanthalia elongata Himel1 dioecious)back to top |