prot_H-elongata_contig54156.12785.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54156.12785.1
Unique Nameprot_H-elongata_contig54156.12785.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length54
Homology
BLAST of mRNA_H-elongata_contig54156.12785.1 vs. uniprot
Match: D7FX40_ECTSI (Beta(1,4)-N-acetylglucosaminyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX40_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 7.680e-20
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MLKLTSHLSQETYTPLTYVVASTDHTSAQRIPREGLLSGRCYVRKIPRSREV 52
            MLKLTS LS ETY+PL YVVASTDHTSA RIP+EGL+SGRC VR IPRSREV
Sbjct:   10 MLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLMSGRCRVRAIPRSREV 61          
BLAST of mRNA_H-elongata_contig54156.12785.1 vs. uniprot
Match: A0A6H5JAQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ0_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 9.020e-17
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 MLKLTSHLSQETYTPLTYVVASTDHTSAQRIPREGLLSGRCYVRKIPRSREV 52
            MLKLTS LS ETY+PL YVVASTDHTSA RIP+EGL+SGR  V  IPRSREV
Sbjct:   70 MLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLMSGRSRVLTIPRSREV 121          
BLAST of mRNA_H-elongata_contig54156.12785.1 vs. uniprot
Match: A0A6A5AWN2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AWN2_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 9.860e-6
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 MLKLTSHLSQETYTPLTYVVASTDHTSAQRIPREGLLSGRCYVRKIPRSREV 52
            MLKL   LS +TY PL +VVA++DHTS ++   E    G  +   IPRSREV
Sbjct:    1 MLKLIKRLSMDTYAPLAFVVAASDHTSEEKARVERKDDGTLHFYTIPRSREV 52          
BLAST of mRNA_H-elongata_contig54156.12785.1 vs. uniprot
Match: A0A835YPL6_9STRA (Beta-N-acetylglucosaminyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL6_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 2.200e-5
Identity = 27/54 (50.00%), Postives = 31/54 (57.41%), Query Frame = 0
Query:    1 MLKLTSHLSQETYTPLTYVVASTDHTSAQRIPREGLLSGRC--YVRKIPRSREV 52
            MLKL      + Y PL YV+A+TDHTSA RIP      G     V  +PRSREV
Sbjct:   13 MLKLLQGAPTDVYAPLHYVIAATDHTSADRIPHADAAPGSAATVVHTVPRSREV 66          
BLAST of mRNA_H-elongata_contig54156.12785.1 vs. uniprot
Match: W4G189_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G189_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.430e-5
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 MLKLTSHLSQETYTPLTYVVASTDHTSAQRIPREGLLSGRCYVRKIPRSREV 52
            MLKL   LS +TY PL +VVA++DHTS ++   E    G  +   IPRSREV
Sbjct:   71 MLKLIKRLSMDTYAPLAFVVAASDHTSEEKARVERKDDGPLHFYTIPRSREV 122          
BLAST of mRNA_H-elongata_contig54156.12785.1 vs. uniprot
Match: W4G327_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G327_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.760e-5
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 MLKLTSHLSQETYTPLTYVVASTDHTSAQRIPREGLLSGRCYVRKIPRSREV 52
            MLKL   LS +TY PL +VVA++DHTS ++   E    G  +   IPRSREV
Sbjct:   71 MLKLIKRLSMDTYAPLAFVVAASDHTSEEKARVERKDDGPLHFYTIPRSREV 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54156.12785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FX40_ECTSI7.680e-2082.69Beta(1,4)-N-acetylglucosaminyltransferase n=1 Tax=... [more]
A0A6H5JAQ0_9PHAE9.020e-1778.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A5AWN2_9STRA9.860e-650.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A835YPL6_9STRA2.200e-550.00Beta-N-acetylglucosaminyltransferase n=1 Tax=Tribo... [more]
W4G189_9STRA3.430e-550.00Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4G327_9STRA3.760e-550.00Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013969Oligosaccharide biosynthesis protein Alg14-likePFAMPF08660Alg14coord: 1..53
e-value: 8.2E-6
score: 25.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54156contigH-elongata_contig54156:3512..3673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54156.12785.1mRNA_H-elongata_contig54156.12785.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54156 3494..3673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54156.12785.1 ID=prot_H-elongata_contig54156.12785.1|Name=mRNA_H-elongata_contig54156.12785.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=54bp
MLKLTSHLSQETYTPLTYVVASTDHTSAQRIPREGLLSGRCYVRKIPRSR
EVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013969Oligosacch_biosynth_Alg14