prot_H-elongata_contig54029.12770.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54029.12770.1
Unique Nameprot_H-elongata_contig54029.12770.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length218
Homology
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BLAST of mRNA_H-elongata_contig54029.12770.1 vs. uniprot
Match: A0A6H5KWI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWI4_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.350e-14
Identity = 48/81 (59.26%), Postives = 64/81 (79.01%), Query Frame = 0 
Query:  138 MKEEKPKRRGPMMNLFKRDSGSQRATTLEQALSAESPDVAAFRQATAAVLARSAPRDRFVVKEPAVLEEASITPVDGEGEA 218
            +K EK KR+ P+++LFKRD+G QR+TT+++ALS ESP+VA FR+  AAVLA SAP+  F V+EP +L EA+I P D EGEA
Sbjct:  423 IKPEKSKRK-PILSLFKRDTGPQRSTTMQEALSDESPNVADFRRGLAAVLAESAPKGEFDVEEPTLLAEATIVPEDFEGEA 502
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54029.12770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWI4_9PHAE1.350e-1459.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54029contigH-elongata_contig54029:216..3754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54029.12770.1mRNA_H-elongata_contig54029.12770.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54029 216..3754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54029.12770.1 ID=prot_H-elongata_contig54029.12770.1|Name=mRNA_H-elongata_contig54029.12770.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp
AAPRSPSAGSGKPRVSPEEAEADTKKMEDSLRSATFDVDEDLFGDTASDS
SAKPSPPPLPASESSLSPEAAREKREDDHTAEGAGVASTAADATVAEEAT
QASVDGGEGSASSRARAAEEYSPVAPSSEPASVTPLPMKEEKPKRRGPMM
NLFKRDSGSQRATTLEQALSAESPDVAAFRQATAAVLARSAPRDRFVVKE
PAVLEEASITPVDGEGEA
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