mRNA_H-elongata_contig53859.12745.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: A0A6H5KYK6_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYK6_9PHAE) HSP 1 Score: 337 bits (863), Expect = 5.770e-112 Identity = 165/217 (76.04%), Postives = 187/217 (86.18%), Query Frame = 1
Query: 1 LSSSYRQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTRNRHDVIVASKVAGRSERLTYLRDSGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVPLFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGERMGYPRVASVQVNCKFL 651
L Y +LGKS+LVVS+ CLGTMTWGEQNSDEEAF+Q N+A+ EFGVNFID AEMYPVP K ETQGRT++ALGKWLK+ RH+V+VA+KVAGRS+RLT+LRD G+GTRV RK+IIEAVDKSLKRL TDYIDLLQIHWPDR VPLFG+NERYDV KE+DDD FEEQL DE+ R GKVR IGTSNDTPYG+ KMAQ+GER+GYPRVASVQ N L
Sbjct: 75 LGMEYSRLGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFIDAAEMYPVPPKPETQGRTEIALGKWLKSVARHNVVVATKVAGRSDRLTWLRDDGKGTRVNRKNIIEAVDKSLKRLDTDYIDLLQIHWPDRAVPLFGANERYDVAKERDDDTSFEEQLEVMDELCRAGKVRAIGTSNDTPYGITKMAQLGERLGYPRVASVQNNYNML 291
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: A0A835Z0T2_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T2_9STRA) HSP 1 Score: 290 bits (742), Expect = 2.900e-94 Identity = 143/213 (67.14%), Postives = 171/213 (80.28%), Query Frame = 1
Query: 13 YRQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTRNRHDVIVASKVAGRSERLTYLRDSGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVPLFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGERMGYPRVASVQVNCKFL 651
Y +LG S+LVVSEVCLGTMTWGEQNSDEEA+ QL LA DEFG+NFIDTAE+YPVP K ET GRTD A+ KWLK R R D+++ASKVAGR+ L +LR SGE TRVR+ DIIE+VDKSL+RLGTDY+DLLQ+HWPDR VPLFG YD +E+ DDIPFEEQL A +EV++ GKVR IG SN+TPYGV+K + E++G PRV S+Q + L
Sbjct: 55 YVKLGSSDLVVSEVCLGTMTWGEQNSDEEAYQQLKLAVDEFGINFIDTAELYPVPAKAETSGRTDKAIAKWLKGRKREDIVLASKVAGRAAHLGHLRSSGEPTRVRKADIIESVDKSLQRLGTDYLDLLQVHWPDRYVPLFGGG-IYDYEQERSDDIPFEEQLQALEEVIKAGKVRNIGLSNETPYGVMKFVTLAEQLGLPRVCSIQNSYSLL 266
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: A0A836CJ26_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ26_9STRA) HSP 1 Score: 289 bits (739), Expect = 2.900e-94 Identity = 137/213 (64.32%), Postives = 174/213 (81.69%), Query Frame = 1
Query: 13 YRQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTRNRHDVIVASKVAGRSERLTYLRDSGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVPLFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGERMGYPRVASVQVNCKFL 651
Y +LG S+LVVSEVCLGTMTWGEQN+DEEA++QL++A+DEFG+NFIDTAEMYPV + ETQGRTD+A+ KWLK RNR DV++ASKV GR + TY+R SG+ RVRR DI+E+VD SL+RLGTDY+DLLQ+HWPDR VP+FG +E Y+ KE+DDD+ FE+QL +EVV+ GKVR IG SN+TP+GV K ++ ER+G PRV S+Q + L
Sbjct: 20 YVKLGSSDLVVSEVCLGTMTWGEQNTDEEAYEQLSVAFDEFGINFIDTAEMYPVQPRAETQGRTDIAISKWLKDRNREDVVLASKVCGRQDTNTYIRKSGQPPRVRRADIVESVDASLQRLGTDYLDLLQVHWPDRYVPIFG-DESYNYAKERDDDVAFEDQLRGLEEVVKAGKVRHIGVSNETPFGVAKFVELSERLGLPRVCSIQNSYSLL 231
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: L1JG80_GUITC (Aldo_ket_red domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JG80_GUITC) HSP 1 Score: 253 bits (646), Expect = 1.880e-80 Identity = 123/213 (57.75%), Postives = 160/213 (75.12%), Query Frame = 1
Query: 13 YRQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTRNRHDVIVASKVAGRSERLTYLRDSGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVPLFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGERMGYPRVASVQVNCKFL 651
Y +LG S+L+VSEVCLGTMTWG+QN++EEA QLN A+D+FGVNFIDTAE YP+P + ET G TD+ +GKW+K R R VI+A+KV G+S RL + RD G+GTRV +K ++E+V+KSLKRL TDYIDLLQIHWPDR VPLFG N +YD+T E +PFEEQL A +E+++ GK+R G SN+TP+GV+ + G + SVQ + L
Sbjct: 3 YNKLGDSDLIVSEVCLGTMTWGKQNTEEEAIQQLNTAFDDFGVNFIDTAEGYPIPLQPETSGATDIIIGKWMKQRPRDQVILATKVCGKSSRLKWFRDDGQGTRVTKKQVVESVEKSLKRLQTDYIDLLQIHWPDRYVPLFGPN-KYDITLETPA-VPFEEQLEAMNELIQQGKIRHWGLSNETPFGVMAFVSLALEQGMAKPVSVQNSYSLL 213
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: A0A7S4EDL0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDL0_9STRA) HSP 1 Score: 248 bits (634), Expect = 2.630e-78 Identity = 128/214 (59.81%), Postives = 161/214 (75.23%), Query Frame = 1
Query: 16 RQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTRNRHD-VIVASKVAGRSERLTYLRDSGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVPLFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGER-MGYPRVASVQVNCKFL 651
RQLG S+LVVS+VCLGTMTWG+QN+ EE QL+ A+DE+G+NF+DTAEMYPVPT+ ETQG+TD +G WLK R R D V++ASK+ G SER+T++R G GTRV DI+E V+ SL+RLGTDYIDLLQIHWPDR VPLFGS YD ++E++ +PF EQL A ++V GKVR IG SN+TPYGV + Q ER PR+ S+Q + L
Sbjct: 31 RQLGTSDLVVSDVCLGTMTWGKQNTLEEGVQQLDCAFDEYGLNFLDTAEMYPVPTEAETQGKTDETIGAWLKKRGRRDDVVLASKICGASERITWVRGDGRGTRVTEADIVEGVEGSLRRLGTDYIDLLQIHWPDRYVPLFGSG-TYDASQEREA-VPFVEQLQALKKLVDQGKVRHIGVSNETPYGVCRFIQEHERDASLPRICSIQNSYSLL 242
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: L1J0D5_GUITC (Aldo_ket_red domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1J0D5_GUITC) HSP 1 Score: 246 bits (628), Expect = 2.580e-77 Identity = 124/216 (57.41%), Postives = 167/216 (77.31%), Query Frame = 1
Query: 13 YRQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTRNRHDVIVASKVAGRSERLTYL--RDSGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVP-LFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGERMGYPRVASVQVNCKFL 651
Y +LG S+L VS CLGTMTWG+QN+ EE +QLN+A+DEFGVNFIDTAEMYP+P K ETQG TD + KWLKT+ R DV++A+KVAG S+R+T+L RD G+G+RV RK+I+ +VD+SLKRL TDYIDLLQIHWPDR + LFG+ YD++K + + FEEQL AFDE++R GKVR++G SN++P+GV+ + +++ P+V S+Q + L
Sbjct: 3 YVKLGNSDLKVSRCCLGTMTWGQQNTMEEGVEQLNVAFDEFGVNFIDTAEMYPIPVKAETQGDTDRTIAKWLKTKRREDVVLATKVAGYSDRITWLPGRD-GKGSRVTRKEILTSVDESLKRLNTDYIDLLQIHWPDRHMGNLFGAPGTYDISKVYES-VSFEEQLRAFDELIRQGKVRYMGVSNESPFGVMNFHFLSKQLNLPQVVSIQNSYSLL 216
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: A0A7S2XWE6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE6_9STRA) HSP 1 Score: 242 bits (618), Expect = 1.460e-75 Identity = 122/215 (56.74%), Postives = 169/215 (78.60%), Query Frame = 1
Query: 16 RQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTR--NRHDVIVASKVAGRSERLTYLRD-SGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVPLFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGERMGYPRVASVQVNCKFL 651
R+LG S+L+VSEVCLGTMTWG QN+DEE +Q++ ++E G NF DTAEMYPVPT ETQGRTD + KW+++R +R +++A+KVAG S+R+T+L +GEG+RV +K+II +VD+SLKRLGTDYIDLLQIHWPDR VPLFG++ Y++++E++ FEEQL EV++ GKVR+IG SN+TPYGV+K Q+ +++G PR+ S+Q + L
Sbjct: 54 RKLGSSDLMVSEVCLGTMTWGVQNTDEEGAEQMDYYFNECGGNFFDTAEMYPVPTTAETQGRTDNCIRKWMQSRGIDRSKLVLATKVAGASDRITWLPGRNGEGSRVTKKEIITSVDESLKRLGTDYIDLLQIHWPDRYVPLFGTS-GYNISEEREA-TSFEEQLEGMQEVIQAGKVRYIGVSNETPYGVMKFCQLADQLGLPRICSIQNSYSLL 266
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: A0A7S4DXK6_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXK6_9EUKA) HSP 1 Score: 243 bits (620), Expect = 1.530e-75 Identity = 118/215 (54.88%), Postives = 160/215 (74.42%), Query Frame = 1
Query: 13 YRQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTRN--RHDVIVASKVAGRSERLTYLRDSGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVPLFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGERMGYPRVASVQVNCKFL 651
Y +LG S+L+VSEVCLGTMTWGEQN+++E +QL A+D+ G+NF+DTAE YP+P K ETQGRTD + +W+K N R V++A+KV G S+ LT+ R +GEGT+V IIE+VD SL+RL TDYIDLLQIHWPDR VPLFG+N RY + +E+D IPFEEQ+ A ++++ GK+R+ G SN+TPYG + M + E++G P S+Q + L
Sbjct: 79 YNKLGNSDLMVSEVCLGTMTWGEQNTEDEGVEQLRTAFDDMGINFLDTAEAYPIPLKAETQGRTDRTIARWMKESNIARDKVVLATKVCGNSDGLTWFRKNGEGTKVSYDQIIESVDASLERLNTDYIDLLQIHWPDRYVPLFGAN-RYKIGEERDS-IPFEEQVRAMGDLIKQGKIRYWGLSNETPYGTMMMVKAAEKLGVPPPVSIQNSYSLL 291
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: F0XXK7_AURAN (Aldo_ket_red domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXK7_AURAN) HSP 1 Score: 239 bits (610), Expect = 9.430e-75 Identity = 121/214 (56.54%), Postives = 160/214 (74.77%), Query Frame = 1
Query: 16 RQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTRN-RHDVIVASKVAGRSERLTYLRDSGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVPLFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGERMG-YPRVASVQVNCKFL 651
RQLG S+LVVS+VCLGTMTWG+QN+ EE QLN+A+D++G+NF+DTAEMYPVPT+ ETQG TD +G+WL+ R R DV++ASK+ G SER+T++RD G GTRV ++D+ E VD SLKRLGTDY+DLLQIHWPDR VP+FG++ YD + E++ + F EQL A ++ GKVR G SN+TPYGV + A + G P + S+Q + L
Sbjct: 27 RQLGSSDLVVSDVCLGTMTWGKQNTLEEGVSQLNMAFDDYGINFLDTAEMYPVPTEAETQGATDKTIGEWLRRRGKRDDVVLASKICGASERITWVRDDGRGTRVTKRDMEEGVDASLKRLGTDYVDLLQIHWPDRYVPIFGAD-AYDASNEREY-VSFLEQLEAMKDLRDAGKVRHFGVSNETPYGVCQFAAEAAKDGDLPEICSIQNSYSLL 238
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Match: A0A7S1GPK5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GPK5_HEMAN) HSP 1 Score: 238 bits (607), Expect = 8.190e-74 Identity = 119/211 (56.40%), Postives = 160/211 (75.83%), Query Frame = 1
Query: 13 YRQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIDTAEMYPVPTKKETQGRTDVALGKWLKTRNRHDVIVASKVAGRSERLTYL-RDSGEGTRVRRKDIIEAVDKSLKRLGTDYIDLLQIHWPDRRVPLFGSNERYDVTKEQDDDIPFEEQLAAFDEVVRDGKVRFIGTSNDTPYGVVKMAQIGERMGYPRVASVQVNC 642
+ +LG S+LVVS CLGTMTWG+QN++EE +QLN+A+DE+GVNF+DTAEMYPVPTK ETQG TD + +WLK R R VI+ASKV G S+ +T+L R GEG RV R+ I ++V+ SL+RLGTDYIDL+QIHWPDR VPLFG +++ T +D PFEEQL F + +GK+R++G SN+TP+GV+K + +R+ P++ S+Q NC
Sbjct: 62 FSKLGDSDLVVSRCCLGTMTWGQQNTEEEGVEQLNVAFDEYGVNFLDTAEMYPVPTKAETQGATDRTVARWLKGRQRDQVILASKVTGWSDNVTWLPRRGGEGARVTRQQIRDSVECSLERLGTDYIDLIQIHWPDRYVPLFGMM-KFNQTMVRDY-TPFEEQLEEFKLLQEEGKIRYVGVSNETPFGVMKFCEAADRLALPKIVSIQ-NC 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53859.12745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53859.12745.1 >prot_H-elongata_contig53859.12745.1 ID=prot_H-elongata_contig53859.12745.1|Name=mRNA_H-elongata_contig53859.12745.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=217bp LSSSYRQLGKSELVVSEVCLGTMTWGEQNSDEEAFDQLNLAYDEFGVNFIback to top mRNA from alignment at H-elongata_contig53859:932..3848+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53859.12745.1 ID=mRNA_H-elongata_contig53859.12745.1|Name=mRNA_H-elongata_contig53859.12745.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2917bp|location=Sequence derived from alignment at H-elongata_contig53859:932..3848+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53859:932..3848+ >mRNA_H-elongata_contig53859.12745.1 ID=mRNA_H-elongata_contig53859.12745.1|Name=mRNA_H-elongata_contig53859.12745.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1302bp|location=Sequence derived from alignment at H-elongata_contig53859:932..3848+ (Himanthalia elongata Himel1 dioecious)back to top |