prot_H-elongata_contig53724.12730.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53724.12730.1
Unique Nameprot_H-elongata_contig53724.12730.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length112
Homology
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BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: A0A6H5KUQ8_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ8_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 2.980e-59
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0 
Query:    1 QGGLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKLLPGRSENAVKNRWNSAARK 104
            +G LVKGPWT EEDQ IIDCI   +T+WSEIAERV+GRVGKQCRERWFNHLDP+LKKSSWTP+EDEILV+GQ RFGNSWTKIAKLLPGRSENAVKNRWNSAARK
Sbjct:  195 EGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKSSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARK 298
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BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: A0A7S2RZ51_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ51_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.150e-53
Identity = 85/107 (79.44%), Postives = 92/107 (85.98%), Query Frame = 0 
Query:    1 QGGLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKLLPGRSENAVKNRWNSAARKHGK 107
            Q GLVKGPWTKEEDQ IIDCI   ITKWSEIAER+ GR+GKQCRERWFNHLDPSLKK  WT +ED +LVE Q ++GNSWTKIAKLLPGRSENAVKNRWNSA R+  K
Sbjct:  303 QPGLVKGPWTKEEDQIIIDCIEAGITKWSEIAERIPGRIGKQCRERWFNHLDPSLKKGGWTEEEDAVLVEAQSKWGNSWTKIAKLLPGRSENAVKNRWNSATRRRQK 409
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BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: A0A5A8DBZ9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBZ9_CAFRO)

HSP 1 Score: 168 bits (426), Expect = 1.930e-48
Identity = 73/102 (71.57%), Postives = 84/102 (82.35%), Query Frame = 0 
Query:    3 GLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKLLPGRSENAVKNRWNSAARK 104
            GLVKGPWT EEDQ I++CI   ITKWSEI+ER+ GR+GKQCRERWFNHLDPS+KK  W+ +ED IL E Q   GN W +IAKLLPGRSEN+VKNRWNSA R+
Sbjct:   59 GLVKGPWTTEEDQVIVNCINAGITKWSEISERIPGRIGKQCRERWFNHLDPSIKKDPWSAEEDRILEEAQCSIGNKWCEIAKLLPGRSENSVKNRWNSAMRR 160
[Close]
BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: A0A7S2SVF3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.140e-48
Identity = 74/102 (72.55%), Postives = 85/102 (83.33%), Query Frame = 0 
Query:    3 GLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKLLPGRSENAVKNRWNSAARK 104
            GLVKG WTKEEDQ IIDCI   I +WSEIAE + GRVGKQ RERWFNHLDP++KK SWT +ED IL   Q R+GNSWTKIA+LLPGR+EN +KNRWNSA+R+
Sbjct:   89 GLVKGTWTKEEDQIIIDCIEAGINRWSEIAEYIPGRVGKQARERWFNHLDPTIKKGSWTDEEDAILTVAQARWGNSWTKIARLLPGRAENTIKNRWNSASRR 190
[Close]
BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: F0Y4D5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4D5_AURAN)

HSP 1 Score: 156 bits (394), Expect = 3.730e-47
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 0 
Query:    3 GLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKLLPGRSENAVKNRWNSA 101
            GLVKG +T+EED+ II+C+     +W +IAER+ GR+GKQCRERW NHLDP+LKK  WT +ED ILVE Q RFGN+WTKIA+LLPGR+E+AVKNRWNSA
Sbjct:   17 GLVKGAFTEEEDKIIIECMREGGLRWMQIAERIPGRIGKQCRERWTNHLDPNLKKGGWTREEDAILVEAQQRFGNAWTKIAELLPGRAESAVKNRWNSA 115
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BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: A0A7S4DB75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB75_HETAK)

HSP 1 Score: 159 bits (403), Expect = 1.700e-46
Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:    3 GLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKLLPGRSENAVKNRWNSA 101
            GLVKG WTKEED  I+ C+   I KWS+IAER+ GR+GKQ RERWFNHLDP LKK  W+P+ED +L E Q R+GN+WTKIA+LLPGRS+N++KN WNS+
Sbjct:  130 GLVKGAWTKEEDAVIVACMESGIKKWSKIAERIPGRIGKQVRERWFNHLDPHLKKGGWSPEEDAVLAEAQARWGNAWTKIARLLPGRSDNSIKNHWNSS 228
[Close]
BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: A0A2R5GBT4_9STRA (Transcription factor MYB3R-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBT4_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.310e-45
Identity = 71/102 (69.61%), Postives = 83/102 (81.37%), Query Frame = 0 
Query:    3 GLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKLLPGRSENAVKNRWNSAARK 104
            GL+KGPWTKEED  I++ I   +TKWSEIA  + GR+GKQCRERWFNHLDPS+KK  WT +ED ILVE Q + GN W +IAK+LPGRSENAVKNRWNSA R+
Sbjct:   42 GLIKGPWTKEEDDTIMEAIESGVTKWSEIATLIPGRIGKQCRERWFNHLDPSIKKGGWTEEEDRILVEYQEKLGNRWCEIAKVLPGRSENAVKNRWNSAMRR 143
[Close]
BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: A0A7S3PK53_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PK53_9STRA)

HSP 1 Score: 162 bits (409), Expect = 5.130e-45
Identity = 71/103 (68.93%), Postives = 83/103 (80.58%), Query Frame = 0 
Query:    3 GLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKL-LPGRSENAVKNRWNSAARK 104
            GLVKGPWTKEED+ I+ C  + ITKWSEIA  V GR+GKQCRERWFNHLDPS++K  WT +ED  L+EGQ   GN W++IAKL LPGR ENAVKNRWN+A R+
Sbjct:  240 GLVKGPWTKEEDETILRCRQNGITKWSEIARHVSGRIGKQCRERWFNHLDPSIRKCEWTEEEDRNLIEGQALLGNKWSQIAKLFLPGRPENAVKNRWNAATRR 342
[Close]
BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: A0A2R5G768_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G768_9STRA)

HSP 1 Score: 164 bits (416), Expect = 5.850e-45
Identity = 71/102 (69.61%), Postives = 83/102 (81.37%), Query Frame = 0 
Query:    3 GLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKLLPGRSENAVKNRWNSAARK 104
            GLVKGPWT+EED  I  CI   ITKWSEIAER+ GR+GKQCRERWFNHLDP++  S+WT +E+++LV  Q  FGN W +IAKLLPGR ENAVKNRWNSA R+
Sbjct:  223 GLVKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDPTIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNSAIRR 324
[Close]
BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Match: A0A2R5GS76_9STRA (Transcription factor MYB3R-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GS76_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.570e-44
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:    3 GLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNHLDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKL-LPGRSENAVKNRWNSAARKH 105
            GLVKGPW  EED+ I  CI   IT+WSEIA RV GR+GKQCRERWFNHLDP+++   WT +ED++L+EGQ + GN W++IAK+ LPGR ENAVKNRWN+A R+H
Sbjct:  184 GLVKGPWQPEEDETIRACIRSGITRWSEIATRVPGRIGKQCRERWFNHLDPNIRTDEWTEEEDQLLIEGQSKLGNKWSQIAKIYLPGRPENAVKNRWNAATRRH 287
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53724.12730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUQ8_9PHAE2.980e-5986.54MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2RZ51_9STRA2.150e-5379.44Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A5A8DBZ9_CAFRO1.930e-4871.57Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S2SVF3_9STRA3.140e-4872.55Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0Y4D5_AURAN3.730e-4768.69Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4DB75_HETAK1.700e-4666.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2R5GBT4_9STRA1.310e-4569.61Transcription factor MYB3R-2 n=1 Tax=Hondaea ferme... [more]
A0A7S3PK53_9STRA5.130e-4568.93Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A2R5G768_9STRA5.850e-4569.61Transcription factor MYB3R-4 n=1 Tax=Hondaea ferme... [more]
A0A2R5GS76_9STRA1.570e-4465.38Transcription factor MYB3R-2 n=1 Tax=Hondaea ferme... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 56..104
e-value: 5.3E-14
score: 62.5
coord: 5..53
e-value: 9.3E-12
score: 55.1
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 57..100
e-value: 2.1E-15
score: 56.6
coord: 6..51
e-value: 1.1E-13
score: 51.1
NoneNo IPR availableGENE3D1.10.10.60coord: 4..57
e-value: 3.5E-22
score: 80.0
NoneNo IPR availableGENE3D1.10.10.60coord: 58..112
e-value: 1.4E-18
score: 68.7
NoneNo IPR availablePANTHERPTHR45614:SF30MYB-RELATED PROTEIN Bcoord: 4..106
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 4..106
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 56..106
score: 18.558
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..55
score: 24.905
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 3..38
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 30..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53724contigH-elongata_contig53724:2447..3675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53724.12730.1mRNA_H-elongata_contig53724.12730.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53724 2447..3675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53724.12730.1 ID=prot_H-elongata_contig53724.12730.1|Name=mRNA_H-elongata_contig53724.12730.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp
QGGLVKGPWTKEEDQKIIDCITHNITKWSEIAERVDGRVGKQCRERWFNH
LDPSLKKSSWTPKEDEILVEGQGRFGNSWTKIAKLLPGRSENAVKNRWNS
AARKHGKKNSRN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf