mRNA_H-elongata_contig53073.12634.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: A0A6H5L5G7_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5G7_9PHAE) HSP 1 Score: 318 bits (816), Expect = 1.140e-103 Identity = 161/205 (78.54%), Postives = 177/205 (86.34%), Query Frame = 1
Query: 1 KAFRDRAEALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIKK 615
KA R+RAEALELRG+CYIHLGD+E+A NHFR+VLLDDPDN C E HRRCR VVKKVEAGA LL G DV GA + WRAATALEPDNP +GPLLLRIA+AH AKDWAETKRAAQEC+N HPDGEVGA+AE+V+GDVH AEEFQEAV+AY RAE KV E+G EVLDQAR KLKQAN+ LEQSKKK YYKILGV RNAD+AQIKK
Sbjct: 269 KAARERAEALELRGRCYIHLGDYELAGNHFRQVLLDDPDNGPCREQHRRCRAVVKKVEAGAELLSGGDVAGATKAWRAATALEPDNPALLGPLLLRIASAHLGAKDWAETKRAAQECLNTHPDGEVGAQAEIVMGDVHQAAEEFQEAVNAYARAETKVKEIGMEVLDQARAKLKQANILLEQSKKKQYYKILGVPRNADLAQIKK 473
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: A0A7S1UAC9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAC9_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.060e-24 Identity = 72/201 (35.82%), Postives = 109/201 (54.23%), Query Frame = 1
Query: 13 DRAEALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIKK 615
D +AL+ RG CY LG+ E A NH+RE L DP++ C + H++ R ++K + G + +G D A +VGP L+ I+ A K + AA+E +N + A+ +GDV + E+++EAV ++GRA E+ G + ++KL +A V LEQSKK+NYYK LGV+R A +IKK
Sbjct: 211 DNLDALQNRGACYYTLGEHEQAINHWREGLKRDPEHKGCKDAHKKLRKLMKAHDKGQKAFDGRDYPTAIXXXXXXXXXXXXXKNYVGPTLILISQAAVKGKALEDAADAARESINVLETADAWAQ----LGDVQVAREQYEEAVRSHGRAV----EIDGSDK-KFKEKLHKAEVALEQSKKRNYYKDLGVARTATAKEIKK 402
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: B8LBL2_THAPS (Dnaj-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBL2_THAPS) HSP 1 Score: 108 bits (271), Expect = 2.010e-24 Identity = 73/205 (35.61%), Postives = 105/205 (51.22%), Query Frame = 1
Query: 1 KAFRDRAEALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIKK 615
K F EA +LRG+ Y L + EMA HFRE L DP++ C E HR + + KK + G E + A W A + + FV P LL++ AH + + A++ H D E +GD L ++F EAV + +A + + Q +QK+++A V L+QSK+KNYYKILGV+RNA + IKK
Sbjct: 131 KVFPKHIEAYQLRGESYWRLNEVEMAMKHFREGLKLDPEHKGCKEGHRLVKKITKKDKRGDEAFEKRQYKQAIEHWWEAMNNDMSHLHFVRPTLLKVVKAHTALGEHDQAILEARK----HVDNEETVEGLHALGDAQLAGDKFDEAVQTFSKAFEIAPD---DQKRQCQQKVEEAKVALKQSKEKNYYKILGVARNAKLKDIKK 328
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: A0A1Z5KA29_FISSO (DnaJ homolog subfamily C member 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA29_FISSO) HSP 1 Score: 108 bits (271), Expect = 3.560e-24 Identity = 73/198 (36.87%), Postives = 106/198 (53.54%), Query Frame = 1
Query: 22 EALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIKK 615
EA LRGQ Y LG+ E A H+RE L DP++ C + H+ +T KK + G + A W A A++ + F L + +A A+ A D A + AQ + GE + +G++ AE+++EAV + RA +V E + A+QKL+ A + L+QSK+KNYYKILGVSRNA +IKK
Sbjct: 208 EAYHLRGQAYHRLGEHEQAILHYREGLKLDPEHKECKKGHKALKTTEKKKKKGDDAFNDGKYKEAVEFWLQAIAVDETHTAFARSLQIPLARAYSKAGDHARALKVAQ--AHVEDSGET-TESLWALGEIQQNAEKYEEAVRTFQRA-VEVTEDRVQEQQTAKQKLRDAQIALKQSKEKNYYKILGVSRNASKKEIKK 401
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: A0A7S4N0N3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N0N3_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.280e-22 Identity = 68/205 (33.17%), Postives = 104/205 (50.73%), Query Frame = 1
Query: 1 KAFRDRAEALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIKK 615
KA D +A +LRG+ Y LG+ +MA NHFRE L DP++ C H+ +T+ KK + G F+ P +L++ AH A + + + A N H + + +GD L AE++ +AV + RA + E + + ++K+++A + L+QSK+KNYYKILGVSRNAD IKK
Sbjct: 223 KAHSDHLDAYQLRGEAYFRLGEHDMAVNHFREALKLDPEHKGCKAGHKAVKTITKKEKRGDDAXXXXXXXXXXXXXXXXXXXXXXXVAFIRPTILKVIKAHSAAGEHDDAIKEA----NRHIELGESVDGILALGDAELGAEKYVDAVRTFRRA---LEFEPNERMQETKEKVQKAEIALKQSKEKNYYKILGVSRNADKKAIKK 420
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: A0A7S0CIM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CIM9_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.320e-22 Identity = 67/205 (32.68%), Postives = 109/205 (53.17%), Query Frame = 1
Query: 1 KAFRDRAEALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIKK 615
K+ + EA ELRGQ Y LG+FE+A H+R+ L DP++ C H+ +++ K + G + ++E A WR A ++ + ++ +I A+ + E + A + E +V+GD L+AE +QE+V+ + +A + E E A++K +A L+QSK+KNYYKILGVSR A + +IKK
Sbjct: 50 KSHPNHLEAFELRGQAYTQLGEFEIAFTHYRQALKFDPEHKGCKAAHKYLKSITKSDKRGEDSVMKDELEEAISHWRKAISIAQNITPYIRETTKKIVKAYSRLQKHDEAIKEANMLIQM----EESIEHFLVLGDAELDAELYQESVNTFRKA-FDMAE-NDEDKRMAKEKYNKAETALKQSKEKNYYKILGVSRTATLKEIKK 248
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: A0A7S2R980_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R980_9STRA) HSP 1 Score: 102 bits (254), Expect = 8.090e-22 Identity = 66/205 (32.20%), Postives = 106/205 (51.71%), Query Frame = 1
Query: 1 KAFRDRAEALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIKK 615
K EA +LRG+ Y+ LG+ + A HFRE L DP+++ C + H+ ++++KK + G + A W A ++ + FV P LL++ AH + + A N H + + GD L + F+EAV ++ +A + + +QKL +A V L+QSK+KNYYK+LGV+RNA+ +IKK
Sbjct: 214 KTHSKHLEAYQLRGEAYMRLGEHDTAVTHFREALKMDPEHSGCKKGHKFVKSIMKKHKRGDDAFSAGEYRKAIGFWWEAMNIDMTHLAFVRPCLLKVVKAHTALGEHDVSILEA----NKHIENMESVEGFLARGDAELAGDMFEEAVRSFSQA---TDFQPNDRQQECKQKLDKAKVALKQSKEKNYYKVLGVARNANKKEIKK 411
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: B7FV17_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FV17_PHATC) HSP 1 Score: 96.3 bits (238), Expect = 1.250e-19 Identity = 68/197 (34.52%), Postives = 98/197 (49.75%), Query Frame = 1
Query: 22 EALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIK 612
EA LRG Y LG+ + A HFRE L DP+ A C + H+ + + KK G D E A+ + A L+P + F P+ L++ + + AQ+ V E + + A+ +++AV + RA +V G E +A QKLK A V L+QSK+KNYYKILGVSR+A +IK
Sbjct: 220 EAYCLRGSAYHRLGEHDQAVLHFREGLKLDPEQADCKKGHKSVKALEKKKAKGDEAYAAGDFESASGHYERAMMLDPTHHAFNRPVQLQLVQTYSKLGQHKKAMDTAQKYVEELESLE----GLWALANAQQAADSYEDAVRTFQRA-VEVAPDGSEQEREANQKLKNAQVALKQSKEKNYYKILGVSRSATAKEIK 411
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: A0A6S8ZH32_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZH32_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.480e-19 Identity = 69/205 (33.66%), Postives = 103/205 (50.24%), Query Frame = 1
Query: 1 KAFRDRAEALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIKK 615
K++ EA +LRG+ Y LG+ + A NHFRE L DP++ C + H+ +T++KK + + FV P LL++ AH + + A + VN E G A +GD + A++F EAV + RA E + A++K+++A V L+QSK+KNYYKILGV RNA +IKK
Sbjct: 220 KSYPSHIEAYQLRGEAYFRLGEHDTAVNHFREGLKLDPEHKGCKKGHKAIKTLLKKEKRXXXXXXXXXXXXXXXXXXXXXXXXISHLAFVRPALLKVVKAHTKLGEHDKAIEEAHKHVNNMESVE-GLHA---LGDAQIAADKFDEAVRTFHRAFEIAPE---DEKRNAQEKVREAEVALKQSKEKNYYKILGVQRNAASKEIKK 417
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Match: A0A7S1BWU5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BWU5_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 5.580e-19 Identity = 64/198 (32.32%), Postives = 95/198 (47.98%), Query Frame = 1
Query: 22 EALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCRTVVKKVEAGARLLEGADVEGAAREWRAATALEPDNPMFVGPLLLRIAAAHRDAKDWAETKRAAQECVNAHPDGEVGARAEMVIGDVHLEAEEFQEAVHAYGRAEAKVGEVGGEVLDQARQKLKQANVQLEQSKKKNYYKILGVSRNADVAQIKK 615
+A +LRG Y LG+ EM+ NH+RE L DP++A C H+ + + KK P++ FV P L + A H AQ + + G +++G+V L AE+F++AV Y + + + D ++K++QA L+QSK KNYYKILGV RNAD +IKK
Sbjct: 214 DAYQLRGDAYFWLGEHEMSKNHYREALRSDPEHAGCKNGHKLIKKIDKKAXXXXXXXXXXXXXXXXXXXXXXXGYVPNHLNFVRPTLQKKARLHSKIGQHDRAIEIAQNLLEVDDESADGY---VLLGEVQLAAEKFEDAVRTYKQGYEETED------DVFKEKIQQAEAALKQSKTKNYYKILGVPRNADSKEIKK 402 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53073.12634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53073.12634.1 >prot_H-elongata_contig53073.12634.1 ID=prot_H-elongata_contig53073.12634.1|Name=mRNA_H-elongata_contig53073.12634.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=207bp KAFRDRAEALELRGQCYIHLGDFEMAANHFREVLLDDPDNASCMELHRRCback to top mRNA from alignment at H-elongata_contig53073:289..3516+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53073.12634.1 ID=mRNA_H-elongata_contig53073.12634.1|Name=mRNA_H-elongata_contig53073.12634.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3228bp|location=Sequence derived from alignment at H-elongata_contig53073:289..3516+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53073:289..3516+ >mRNA_H-elongata_contig53073.12634.1 ID=mRNA_H-elongata_contig53073.12634.1|Name=mRNA_H-elongata_contig53073.12634.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1242bp|location=Sequence derived from alignment at H-elongata_contig53073:289..3516+ (Himanthalia elongata Himel1 dioecious)back to top |