prot_H-elongata_contig5298.12626.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5298.12626.1
Unique Nameprot_H-elongata_contig5298.12626.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length289
Homology
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 1.010e-75
Identity = 128/284 (45.07%), Postives = 182/284 (64.08%), Query Frame = 0
Query:    6 LGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWRLAWGAVQWALNSANREHMGTTPFQMMTGRPPVKAMSVLAGEYGDGWTVEELDVSGEKMKVWVAGWVREQEYLRRDVVKRVREQRERVRELSGLGHLPVFEVGDYVLVAWVRKPGRVRKLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGE-YRVKIAWVGLEDENLTWEPMSTIYADAPKYIEQNLRKI 288
            LGV   F VAN  WS GT +RM REVV+T +AVL ERRR+  +W     AVQWALN+A RE   +TP+ +M GR P  + S LA   G+ W ++ LD +  K+K  V   ++ Q  L + + ++V   R R R  +  G LP F VGDYV+VA VR+ G   KL  TWTGPWRV+    +HV+ V++IV G+ + VHV R+R YADS L V +++++VF+ +  QGE EM  ++++G  PA  G  Y V++ W G E++  TW+P+S IY DAP++++Q LRK+
Sbjct:  129 LGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDAT--KLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKM 408          
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 1.360e-70
Identity = 128/284 (45.07%), Postives = 182/284 (64.08%), Query Frame = 0
Query:    6 LGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWRLAWGAVQWALNSANREHMGTTPFQMMTGRPPVKAMSVLAGEYGDGWTVEELDVSGEKMKVWVAGWVREQEYLRRDVVKRVREQRERVRELSGLGHLPVFEVGDYVLVAWVRKPGRVRKLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGE-YRVKIAWVGLEDENLTWEPMSTIYADAPKYIEQNLRKI 288
            LGV   F VAN  WS GT +RM RE+V+T +AVL ERRR+  +W     AVQWALN+A RE   +TP+ +M GR P  + S LA   G+ W ++ LD +  K+K  V   ++ Q  L + V ++V   R R R  +  G LP F VGDYV+VA VR+ G   KL  TWTGPWRV+    +HV+ V++IV G+ + VHV R+R YADS L V +++++VF+ +  QGE EM  ++++G  PA  G  Y V++ W G E++  TW+P+S IY DAP++++Q LRK+
Sbjct: 1352 LGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDAT--KLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKM 1631          
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 5.530e-41
Identity = 71/152 (46.71%), Postives = 104/152 (68.42%), Query Frame = 0
Query:  138 RELSGLGHLPVFEVGDYVLVAWVRKPGRVRKLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGE-YRVKIAWVGLEDENLTWEPMSTIYADAPKYIEQNLRKI 288
            R  +  G LP F VGDYV+VA VR+ G   KL  TWTGPWRV+    +HV+ V++IV G+ + VHV R+R YADS L V +++++VF+ +  QGE EM  ++++G  PA  G  Y V++ W G E++  TW+P+S IY DAP++++Q LRK+
Sbjct:    4 RAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKM 153          
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: A0A6G0RPX5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RPX5_9STRA)

HSP 1 Score: 120 bits (302), Expect = 4.010e-28
Identity = 87/288 (30.21%), Postives = 149/288 (51.74%), Query Frame = 0
Query:    5 RLGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWRLAWGAVQWALNSANREHMGT-TPFQMMTGRPPVKAMSVLAGEYGDGWTVEELDVSGEKMKVWVAGWVREQEYLRRDVVKRVREQRERVRELS-GLGHLPVFEVGDYVLVAWVRKPGRVR--KLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGEYRVKIAWVGLEDENLTWEPMSTIYADAP----KYIEQN 284
            RL     F  A   W  GTV+R+NR++++  RA+L E +   G W      +Q  LN +    +G   P ++  G P   A+  +A     G  +  +D   E++   V    R    +R++     +++++R+ E++   G +  F VGD+VL  W R   R++  KL+  W GP+RV+    +H  ++E ++T +  +VH  R++ Y DSSL V AE++E   + K      +  +++   +P    E+ V++AW+GLED   +WEP+  IYAD P    +YI+ N
Sbjct:   83 RLKANQSFVPAYTPWINGTVERINRDILQVLRAMLLEFQLDTGNWLYLLPLIQANLNHSPVASLGNHAPIEVFMGLPAPSALDTIAVPSDKGTRLVPVDP--ERVSAHVEKLRRSLHAMRKEAT--TQKEKKRLYEMARAKGGICNFAVGDFVL--WSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIIEHLITKDKVEVHGSRLKFYCDSSLNVTAELKE--HVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYADVPTKVQEYIDSN 360          
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: A0A6A4G1U2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G1U2_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.750e-25
Identity = 84/288 (29.17%), Postives = 147/288 (51.04%), Query Frame = 0
Query:    5 RLGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWRLAWGAVQWALNSANREHMGT-TPFQMMTGRPPVKAMSVLAGEYGDGWTVEELDVSGEKMKVWVAGWVREQEYLRRDVVKRVREQRERVRELS-GLGHLPVFEVGDYVLVAWVRKPGRVR--KLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGEYRVKIAWVGLEDENLTWEPMSTIYADAP----KYIEQN 284
            RL     F      W  GTV+R+NR++++  RA+L E +     W      +Q  LN +    +G   P ++ TG P   A+  +A     G  +  +D   E++   V    R    + ++     +++++R+ E++   G +  F VGD+VL  W R   R++  KL+  W GP+RV+    +H  +++ ++T +  +VH  R++ Y DSSL V AE++E   + K      +  +++   +P    E+ V++AW+GLED   +WEP+  IYAD P    +YI+ N
Sbjct:  706 RLKANQSFVPVYTPWINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHSPVASLGNHAPIEVFTGLPAPSALDTIAVPSDKGTRLVPVDP--ERVSAHVEKLRRSLHAMHKEAT--TQKEKKRLYEMARAKGGICNFAVGDFVL--WSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNVTAELKE--HVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYADVPTKVQEYIDSN 983          
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: A0A6A3KPV3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KPV3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.050e-25
Identity = 84/288 (29.17%), Postives = 147/288 (51.04%), Query Frame = 0
Query:    5 RLGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWRLAWGAVQWALNSANREHMGT-TPFQMMTGRPPVKAMSVLAGEYGDGWTVEELDVSGEKMKVWVAGWVREQEYLRRDVVKRVREQRERVRELS-GLGHLPVFEVGDYVLVAWVRKPGRVR--KLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGEYRVKIAWVGLEDENLTWEPMSTIYADAP----KYIEQN 284
            RL     F      W  GTV+R+NR++++  RA+L E +     W      +Q  LN +    +G   P ++ TG P   A+  +A     G  +  +D   E++   V    R    + ++     +++++R+ E++   G +  F VGD+VL  W R   R++  KL+  W GP+RV+    +H  +++ ++T +  +VH  R++ Y DSSL V AE++E   + K      +  +++   +P    E+ V++AW+GLED   +WEP+  IYAD P    +YI+ N
Sbjct: 1122 RLKANQSFVPVYTPWINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHSPVASLGNHAPIEVFTGLPAPSALDTIAVPSDKGTRLVPVDP--ERVSAHVEKLRRSLHAMHKEAT--TQKEKKRLYEMARAKGGICNFAVGDFVL--WSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNVTAELKE--HVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYADVPTKVQEYIDSN 1399          
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: A0A6A4C7W4_9STRA (RNA-directed DNA polymerase (Fragment) n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4C7W4_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.520e-24
Identity = 82/285 (28.77%), Postives = 134/285 (47.02%), Query Frame = 0
Query:    1 MVSSRLGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWRLAWGAVQWALNSAN-REHMGTTPFQMMTGRPPVKAMSVLA--GEYGDGWTVEELDVSG--EKMKVWVAGWVREQEYLRRDVVKRVREQRERVRELSGLGHLPVFEVGDYVLVAWVRKPGRV--RKLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGEYRVKIAWVGLEDENLTWEPMSTIYADAP 278
            ++  R  +  HF      W  GTV+R+NR+V++  R +L E      EW      +Q  LN    R   G  P ++    PP  A++++   G      T++  +V+   EK++  +A        + RD +  V+E++      +  G    F+VGDYVL  W R   R+   KL+  W GP+ V      H  ++  ++TG T +VH  R+R YADSSL V     ++ E   +QG     D  S  +  A    + + + W GL+D   +WEP+ ++ A+ P
Sbjct: 1192 ILGGRFKIEQHFSPVYTPWVNGTVERLNRDVLQVLRVMLMEYHLDHHEWPFLLPVIQANLNQTPVRSLAGKCPMELFLALPPPSALNMITRPGHSDSITTIDLTNVADSLEKVRSSLAA-------MHRDAID-VKEKKRLYDMATAKGTTTNFDVGDYVL--WSRVDERLAHNKLLVQWVGPFAVTEA-RPHSFMIRHLLTGSTYEVHGSRLRFYADSSLDV---TEDILEFVSNQGMLLGVDGFSDHRYNADASRWELLVKWTGLQDIEASWEPLKSLKAEVP 1462          
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: A0A6G0WRF7_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRF7_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.670e-24
Identity = 82/288 (28.47%), Postives = 140/288 (48.61%), Query Frame = 0
Query:    2 VSSRLGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWRLAWGAVQWALNSANREHMG-TTPFQMMTGRPPVKAMSVLAGE-----YGDGWTVEELDVSGEKMKVWVAGWVREQEYLRRDVVKRVREQRERVREL-SGLGHLPVFEVGDYVLVAWVRKPGRVRKLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGEYRVKIAWVGLEDENLTWEPMSTIYADAPKYIE 282
            ++SRL   H+  +A+  W  G+V+R+NR+++   RA+L+E R +  EW      VQ  +N    E +G  +P    TG  P   ++V+ G      + DG  + EL++    +K  +    +  + L + ++ R R  + R   L +    L V E GDYVL + V +     KL+ TW GP+RVL     +  V+E ++TG+TQ+ H  R++ YAD  L +     E+ +    QG     D     +      ++ +K  W GLE    +WE +  +Y + P  ++
Sbjct:   68 LASRLKAQHNIVLAHCPWRNGSVERVNRDILSVMRAMLAESRLNETEWDYLLPVVQANMNQTPTESLGGISPMFAYTGLEPTTPLNVVVGRVNRKLHTDG--LHELNMEKTSIKNAMRNLNQSLQELHKKILDRKRAAQNRNMLLKTNTSELNVSE-GDYVLWSRVDENAHYPKLLVTWIGPYRVLEC-LPYSCVIEHLLTGKTQEAHHSRLKFYADDHLDL---TEEILDPVSLQGITLAVDAFEAARYNPGSNQWELKTHWKGLESIESSWEALPKLYGEVPGLVK 348          
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: W2HU98_PHYPR (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HU98_PHYPR)

HSP 1 Score: 112 bits (280), Expect = 4.600e-24
Identity = 87/294 (29.59%), Postives = 141/294 (47.96%), Query Frame = 0
Query:    2 VSSRLGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWRLAWGAVQWALNSANREHMGT-TPFQMMTGRPPVKAMSVLAGEYGDGWTVEELDVSG-----EKMKVWVAGWVREQEYLRRDVVKRVREQRERVRELS-GLGHLPVFEVGDYVLVAWVRKPGRVR--KLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGEYRVKIAWVGLEDENLTWEPMSTIYADAPKYIEQNLR 286
            ++ RL     F      W  GTV+R+NR++++  R +L E +     W      +Q  LN +    +G   P ++ TG P    +  ++   GD + +  +D++      +K++  +       + L RDVV R  ++R R++E++   G    FE GDYVL  W R   R+    L+  W GP+RV+   S H  VV  ++T +  +VH  R++ Y D+ L   AE+RE       QG       I      A   E+++ +AW GLEDE  +WEP + IY D P    Q ++
Sbjct: 1112 LADRLQATQRFVPVYTPWINGTVERVNRDILQVLRVMLMELKLDTRNWVYLLPGIQANLNHSVVASLGGHAPIELFTGLPAPSLLDTMSVPNGDSYRLLPVDMTAAAPHLDKLREHL-------QMLHRDVVDR--KERGRLQEMARSKGTDCNFEEGDYVL--WSRVDNRMSGTNLLVRWVGPFRVVRALS-HSFVVSHLLTNDEFEVHGSRLKHYCDADLGTTAEIRE---HVASQGILLGVRAIVDHCYDATAKEWQLHVAWRGLEDEENSWEPFAVIYRDVPTLARQYIQ 1390          
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Match: A0A6A4FAC4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FAC4_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.980e-23
Identity = 78/288 (27.08%), Postives = 142/288 (49.31%), Query Frame = 0
Query:    2 VSSRLGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWRLAWGAVQWALNSANREHM-GTTPFQMMTGRPPVKAMSVLAGEYGDGWTVEELDVSGEKMKVWVAGWVREQEYLRRDVVKRVRE--QRERVRELSGLGHLPV-FEVGDYVLVAWVRKPGRV--RKLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQKVHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGEYRVKIAWVGLEDENLTWEPMSTIYADAPKYIEQ 283
            +++RL +  HF      W  GTV+R+N++V++  +++L E      EW     A+Q  LN      + G  P ++ TG P   A+ V+    G+      +D+        + G+V +    +  + + V +  +R+R+R+++    +PV F+VGD+VL  W R   R+   KL+  W GP+RV+     H   +E +VTG    VH  R++ YAD+ L   A   E+ E+   QG     + +   +    +  + + ++W GL+    +WEP+ T+  D P+ + +
Sbjct:    5 LAARLKMELHFTPVYSPWLNGTVERLNKDVLQVLQSLLMEYGLDQHEWPYLLPAIQANLNHTPVPSLAGHAPVEVFTGLPASSALDVIVVPVGNEQAERVVDLDD------IGGFVAQLRSSQHAIHQEVSDAKERQRLRDMASHKGIPVNFDVGDFVL--WSRIDQRLPNNKLLGHWVGPFRVV-AALAHSFEIEHLVTGRKYDVHASRLKFYADAELGTPA---ELLELVSSQGMLLGVEKLVDHRYNRDLNRWELFVSWAGLQAIENSWEPLITLLHDVPEKVRE 280          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5298.12626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVS6_9PHAE1.010e-7545.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE1.360e-7045.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAI3_9PHAE5.530e-4146.71Chromo domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6G0RPX5_9STRA4.010e-2830.21Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]
A0A6A4G1U2_9STRA3.750e-2529.17Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6A3KPV3_9STRA4.050e-2529.17Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]
A0A6A4C7W4_9STRA2.520e-2428.77RNA-directed DNA polymerase (Fragment) n=3 Tax=Phy... [more]
A0A6G0WRF7_9STRA2.670e-2428.47Integrase catalytic domain-containing protein n=1 ... [more]
W2HU98_PHYPR4.600e-2429.59Uncharacterized protein n=3 Tax=Phytophthora paras... [more]
A0A6A4FAC4_9STRA1.980e-2327.08Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..93
e-value: 1.4E-12
score: 49.2
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 233..288
score: 10.06
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 5..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5298contigH-elongata_contig5298:7724..8590 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5298.12626.1mRNA_H-elongata_contig5298.12626.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5298 7724..8773 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5298.12626.1 ID=prot_H-elongata_contig5298.12626.1|Name=mRNA_H-elongata_contig5298.12626.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=289bp
MVSSRLGVVHHFGVANVSWSQGTVKRMNREVVKTFRAVLSERRRSPGEWR
LAWGAVQWALNSANREHMGTTPFQMMTGRPPVKAMSVLAGEYGDGWTVEE
LDVSGEKMKVWVAGWVREQEYLRRDVVKRVREQRERVRELSGLGHLPVFE
VGDYVLVAWVRKPGRVRKLVQTWTGPWRVLPGGSEHVHVVEDIVTGETQK
VHVVRMRPYADSSLVVRAEVREVFEMTKHQGEFEMADVISVGKDPARVGE
YRVKIAWVGLEDENLTWEPMSTIYADAPKYIEQNLRKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR000953Chromo/chromo_shadow_dom
IPR012337RNaseH-like_sf