prot_H-elongata_contig52811.12598.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52811.12598.1
Unique Nameprot_H-elongata_contig52811.12598.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length128
Homology
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: D7FR67_ECTSI (Ubiquitin family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 6.120e-34
Identity = 75/99 (75.76%), Postives = 78/99 (78.79%), Query Frame = 0
Query:   30 PATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSNNRAPAPAPN-PSGGPNTSALPNPWAPAG 127
            PATMRQYL+MARNP AM QARRSQDLMMSQIENQPGGFNALRR+Y EVQEPMMQASEGM     AG AG+N          PS GPNTSALPNPWA AG
Sbjct:  193 PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGANXXXXXXXXXXPSAGPNTSALPNPWAAAG 291          
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A6H5KF83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF83_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.900e-28
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 0
Query:   17 MQNNPQLAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIY 74
            MQNNPQLAQVLNDPATMRQYL+MARNP AM QARRSQDLMMSQIENQPGGFNALRR+Y
Sbjct:    1 MQNNPQLAQVLNDPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLY 58          
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: I2CQX3_NANGC (Ubiquilin n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX3_NANGC)

HSP 1 Score: 100 bits (248), Expect = 3.090e-22
Identity = 61/104 (58.65%), Postives = 68/104 (65.38%), Query Frame = 0
Query:   27 LNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGM----ANVGGAGAAG--SNNRAPAPAPNPSGGPNTSALPNPWA 124
            LNDPA +RQ +E ARNPAA EQ  RS DL MSQIEN P GFNALRR+Y ++QEPMM+A  G      N G    A   SNN  PAP   P    NT+ALPNPWA
Sbjct:   75 LNDPAMLRQAMETARNPAAREQMMRSNDLAMSQIENHPEGFNALRRMYHDIQEPMMEAMTGSNSSDPNAGTTANASHASNNATPAPTSRP----NTAALPNPWA 174          
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A8J2KJT8_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2KJT8_9HEXA)

HSP 1 Score: 97.4 bits (241), Expect = 4.640e-21
Identity = 57/127 (44.88%), Postives = 84/127 (66.14%), Query Frame = 0
Query:    2 LRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGG--AGAAGSNNRAPAPA-PNPSGGPNTSALPNPWAP 125
            +R+++ +NPQ+QQ +M+ NP+L  VLN+P  +RQ +E+ARNPAA ++  R+QD  +S +E+ PGG+NAL+R+Y ++QEPM+ A +     G   AG  G NN     + P   G  N   LPNPWAP
Sbjct:  184 IRTMLSANPQIQQ-LMERNPELTHVLNNPEIIRQSMELARNPAAFQELMRTQDRALSNLESIPGGYNALQRMYRDIQEPMLDAVQESRLAGNPFAGLVGGNNAGGVDSQPQQQGVENRDPLPNPWAP 309          
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A5J4Y3D6_9CHLO (Ubiquitin family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y3D6_9CHLO)

HSP 1 Score: 94.7 bits (234), Expect = 3.590e-20
Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 0
Query:    1 MLRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMAN--------VGGAGAAGSNNRAPAPAPNP-SGGPNTSALPNPWAPA 126
            MLR++  SNP +QQ +M  NP+ AQVLN+P  +++ ++ A NPA M +  R+QD  M+ IE+ P GFNALRR+Y   QEP+M A+ G  N        + G GAA +    P+   N  S  PNT+ LPNPWAP+
Sbjct:  154 MLRNMFSSNPAIQQ-LMDRNPEFAQVLNNPQQLQEAMQAASNPALMREQMRNQDRTMANIESHPEGFNALRRMYENFQEPLMDAAAGQGNSQQDPLAALLGGGAAST----PSXTDNAASSAPNTAPLPNPWAPS 283          
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A8J5XJM4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJM4_DIALT)

HSP 1 Score: 94.0 bits (232), Expect = 6.890e-20
Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 0
Query:    2 LRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSNNRAPAPAPNPSGGPNTSALPNPWAPA 126
            LR+I+ SNP+M++ V + NP++  +L+DPA +RQ +E ARNP  M +  RS D  MS +E  P GFNALRR+Y  +QEP+ Q           GA   ++ AP         PNT+ALPNPWAPA
Sbjct:  128 LRAIVLSNPEMRRLV-EANPEIGHILSDPAVLRQTVESARNPELMREMMRSSDRAMSNMEAHPEGFNALRRMYTSIQEPLSQIGPSGDRAADDGADPRSSLAPLTEA-----PNTAALPNPWAPA 246          
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A3EXM7_MACHI (Putative ubiquilin 1,2 (Fragment) n=1 Tax=Maconellicoccus hirsutus TaxID=177089 RepID=A3EXM7_MACHI)

HSP 1 Score: 92.4 bits (228), Expect = 1.400e-19
Identity = 56/129 (43.41%), Postives = 86/129 (66.67%), Query Frame = 0
Query:    2 LRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQA-SEGMAN----VGGAGAAGSNNRAPAPAPNPSGGPNTSALPNPWAP 125
            +R ++ SNPQMQ  +++++P++  +LN+P  +RQ +EMARNP+ +++  R+QD  +S +E+ PGGFNAL+R+Y EVQEP++ A SE +      VGG  A GSN +         G  N + LPNPW+P
Sbjct:   16 VRQMLLSNPQMQD-IIEHHPEINHMLNNPDLLRQTMEMARNPSMLQELMRTQDRALSNLESIPGGFNALQRMYREVQEPLLNAASEQLGRNPYAVGGNSAEGSNPQ--------QGQENRNPLPNPWSP 135          
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A7R9THW9_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9THW9_9VIRI)

HSP 1 Score: 90.5 bits (223), Expect = 3.360e-19
Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = 0
Query:    1 MLRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSNNRAPAPAPNPSGGPNTSALPNPWAPAG 127
            +L+ ++ +NPQ++  + + NP+LA VL DP  +RQ +++A NP        + D  ++ IE+ P GFNALRR+Y  VQEP+M A++  A  GG  A G    A    P   G PN + LPNPWAPAG
Sbjct:  177 LLQGMVEANPQLRA-LAERNPELAHVLRDPEVLRQAMQVATNPELQRAQNAASDRALANIESHPEGFNALRRMYENVQEPLMDAAQ--ARDGGNAADGGGQAARTAPPATEGAPNVAPLPNPWAPAG 300          
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A7S4CCT9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CCT9_9EUGL)

HSP 1 Score: 87.4 bits (215), Expect = 4.270e-19
Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    2 LRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQA-SEGMANVGGAGAAGSNNRAPAPA-----PNPSGGPNTSALPNPW 123
            LR++M +NP  +Q VM+ NP++A+ L DP T+RQ ++M RNP+ M++  R+ D  +S ++  PGG +AL R+Y EVQ P+ +A  E MAN   A  AG N  A  PA       P G PN   LPNPW
Sbjct:   29 LRTVMMANPATRQ-VMERNPEIARALQDPQTLRQAMDMIRNPSLMQEMTRNTDRALSNLDAVPGGMDALARLYNEVQRPLEEAREESMANNPFAPLAG-NTAAATPANTTRPQGPRGPPNPQPLPNPW 154          
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A1Y2GQF1_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GQF1_9FUNG)

HSP 1 Score: 91.7 bits (226), Expect = 4.450e-19
Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 0
Query:    2 LRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMA-------NVGGAGAAGSNNRAPAPAPNPSGGPNTSALPNPWAP 125
            +R +M +NP  ++ VM+NNP++AQ+LNDP+ +RQ ++MARNP  M+QA R+ D  +S +E  PGGFN LRR+Y  VQEPM +AS  M        N   A    ++ R  A      G  NT+ALPNPWAP
Sbjct:  134 VRRMMMANPHTRE-VMENNPEVAQMLNDPSFLRQSMDMARNPKLMKQALRNNDRALSNLEMVPGGFNHLRRMYHSVQEPM-EASRSMPEPSTDDLNAQFAARLNADTRPQA------GQLNTTALPNPWAP 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR67_ECTSI6.120e-3475.76Ubiquitin family protein, expressed n=1 Tax=Ectoca... [more]
A0A6H5KF83_9PHAE2.900e-2893.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
I2CQX3_NANGC3.090e-2258.65Ubiquilin n=1 Tax=Nannochloropsis gaditana (strain... [more]
A0A8J2KJT8_9HEXA4.640e-2144.88Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A5J4Y3D6_9CHLO3.590e-2045.19Ubiquitin family n=1 Tax=Trebouxia sp. A1-2 TaxID=... [more]
A0A8J5XJM4_DIALT6.890e-2045.60Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A3EXM7_MACHI1.400e-1943.41Putative ubiquilin 1,2 (Fragment) n=1 Tax=Maconell... [more]
A0A7R9THW9_9VIRI3.360e-1942.52Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A7S4CCT9_9EUGL4.270e-1944.53Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A1Y2GQF1_9FUNG4.450e-1946.56Uncharacterized protein n=1 Tax=Lobosporangium tra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 9..49
e-value: 1.3E-5
score: 34.6
NoneNo IPR availableGENE3D1.10.260.100coord: 4..65
e-value: 6.7E-6
score: 28.1
IPR015496UbiquilinPANTHERPTHR10677UBIQUILINcoord: 1..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52811contigH-elongata_contig52811:412..3439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52811.12598.1mRNA_H-elongata_contig52811.12598.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52811 412..3463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52811.12598.1 ID=prot_H-elongata_contig52811.12598.1|Name=mRNA_H-elongata_contig52811.12598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
MLRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYLEMARNPAAMEQAR
RSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSN
NRAPAPAPNPSGGPNTSALPNPWAPAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006636STI1_HS-bd
IPR015496Ubiquilin