mRNA_H-elongata_contig52811.12598.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52811.12598.1
Unique NamemRNA_H-elongata_contig52811.12598.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: D7FR67_ECTSI (Ubiquitin family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 8.290e-34
Identity = 75/99 (75.76%), Postives = 78/99 (78.79%), Query Frame = 1 
Query:  112 PATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSNNRAPAPAPN-PSGGPNTSALPNPWAPAG 405
            PATMRQYL+MARNP AM QARRSQDLMMSQIENQPGGFNALRR+Y EVQEPMMQASEGM     AG AG+N          PS GPNTSALPNPWA AG
Sbjct:  193 PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGANXXXXXXXXXXPSAGPNTSALPNPWAAAG 291
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A6H5KF83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF83_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 5.430e-23
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 1 
Query:   94 AQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIY 246
            AQVLNDPATMRQYL+MARNP AM QARRSQDLMMSQIENQPGGFNALRR+Y
Sbjct:    8 AQVLNDPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLY 58
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: I2CQX3_NANGC (Ubiquilin n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX3_NANGC)

HSP 1 Score: 100 bits (248), Expect = 4.100e-22
Identity = 61/104 (58.65%), Postives = 68/104 (65.38%), Query Frame = 1 
Query:  103 LNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGM----ANVGGAGAAG--SNNRAPAPAPNPSGGPNTSALPNPWA 396
            LNDPA +RQ +E ARNPAA EQ  RS DL MSQIEN P GFNALRR+Y ++QEPMM+A  G      N G    A   SNN  PAP   P    NT+ALPNPWA
Sbjct:   75 LNDPAMLRQAMETARNPAAREQMMRSNDLAMSQIENHPEGFNALRRMYHDIQEPMMEAMTGSNSSDPNAGTTANASHASNNATPAPTSRP----NTAALPNPWA 174
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A5J4Y3D6_9CHLO (Ubiquitin family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y3D6_9CHLO)

HSP 1 Score: 91.7 bits (226), Expect = 5.900e-19
Identity = 61/143 (42.66%), Postives = 82/143 (57.34%), Query Frame = 1 
Query:    1 QGLLNNPEMLRSIMFSXXXXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMAN--------VGGAGAAGSNNRAPAPAPNP-SGGPNTSALPNPWAPA 402
            Q +LN+PEMLR+ MFS               AQVLN+P  +++ ++ A NPA M +  R+QD  M+ IE+ P GFNALRR+Y   QEP+M A+ G  N        + G GAA +    P+   N  S  PNT+ LPNPWAP+
Sbjct:  146 QSVLNDPEMLRN-MFSSNPAIQQLMDRNPEFAQVLNNPQQLQEAMQAASNPALMREQMRNQDRTMANIESHPEGFNALRRMYENFQEPLMDAAAGQGNSQQDPLAALLGGGAAST----PSXTDNAASSAPNTAPLPNPWAPS 283
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A835Z7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 8.340e-19
Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 1 
Query:    1 QGLLNNPEMLRSIMFSXXXXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQA 276
            QGLLN+PE LRS M + XXXXXXXXXXXXXX  V NDPA +RQ LEM RNPAAM +A RSQD  MS +E  P GFNALRR+Y E+QEPMM+A
Sbjct:  159 QGLLNDPETLRS-MVTGXXXXXXXXXXXXXXXXVFNDPAVIRQSLEMMRNPAAMREAMRSQDRAMSNLETHPEGFNALRRMYTEMQEPMMEA 249
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A7S2W3L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3L9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.060e-18
Identity = 64/95 (67.37%), Postives = 74/95 (77.89%), Query Frame = 1 
Query:    1 QGLLNNPEMLRSIMFSXXXXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEG 285
            Q LLNNP+   S M  XXXXXXXXXXXXXX + +LNDPA MRQ +E  RNP+AM +  RSQDL MSQ+EN P GFNALRR+Y EVQEPMM+A+ G
Sbjct:  154 QQLLNNPDXXXS-MLEXXXXXXXXXXXXXXLSHILNDPAVMRQTMEAMRNPSAMREMMRSQDLAMSQLENHPEGFNALRRMYHEVQEPMMEATMG 247
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A7S3U9N8_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3U9N8_9CHLO)

HSP 1 Score: 88.2 bits (217), Expect = 9.600e-18
Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 1 
Query:   94 AQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSNNRAPAPAPNPSGGPNTSALPNPWAPAG 405
            A + NDP+ +RQ +E+ARNP  + +  R+ D  MS IE  P GFN LRR+Y  VQEPMM AS    +     +     +  A  PNP+G PNT+ LPNPWAPAG
Sbjct:  171 AHIFNDPSVLRQTMEIARNPDLLREQMRNTDRAMSNIEAHPEGFNMLRRMYENVQEPMMSASVAPEDTENPFSDLFQPQQSAGTPNPTGSPNTTPLPNPWAPAG 274
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A2P6N1T8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N1T8_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 2.720e-17
Identity = 54/101 (53.47%), Postives = 63/101 (62.38%), Query Frame = 1 
Query:  103 LNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSNNRAPAPAPNPSGGPNTSALPNPWAPAG 405
            LNDPAT+RQ  EMARNP  M +  RS D  MS IE+ P GFN LRR+Y +VQEP+M A+    N   AGA+ S    PA     S  PNT+ LPNPW  AG
Sbjct:  186 LNDPATLRQTFEMARNPDLMREMMRSTDRAMSNIESHPEGFNLLRRMYTDVQEPLMNAATA-GNQPAAGASSSTTSQPA-----STNPNTAPLPNPWNSAG 280
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A7R9THW9_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9THW9_9VIRI)

HSP 1 Score: 85.5 bits (210), Expect = 3.250e-17
Identity = 55/135 (40.74%), Postives = 70/135 (51.85%), Query Frame = 1 
Query:    1 QGLLNNPEMLRSIMFSXXXXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSNNRAPAPAPNPSGGPNTSALPNPWAPAG 405
            Q LL NPE+L+  M                 A VL DP  +RQ +++A NP        + D  ++ IE+ P GFNALRR+Y  VQEP+M A++  A  GG  A G    A    P   G PN + LPNPWAPAG
Sbjct:  169 QSLLANPELLQG-MVEANPQLRALAERNPELAHVLRDPEVLRQAMQVATNPELQRAQNAASDRALANIESHPEGFNALRRMYENVQEPLMDAAQ--ARDGGNAADGGGQAARTAPPATEGAPNVAPLPNPWAPAG 300
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BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Match: A0A8J5XJM4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJM4_DIALT)

HSP 1 Score: 85.9 bits (211), Expect = 6.570e-17
Identity = 55/134 (41.04%), Postives = 72/134 (53.73%), Query Frame = 1 
Query:    1 QGLLNNPEMLRSIMFSXXXXXXXXXXXXXXXAQVLNDPATMRQYLEMARNPAAMEQARRSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSNNRAPAPAPNPSGGPNTSALPNPWAPA 402
            Q +++NPE LR+I+ S                 +L+DPA +RQ +E ARNP  M +  RS D  MS +E  P GFNALRR+Y  +QEP+ Q           GA   ++ AP         PNT+ALPNPWAPA
Sbjct:  119 QQIMSNPETLRAIVLSNPEMRRLVEANPEI-GHILSDPAVLRQTVESARNPELMREMMRSSDRAMSNMEAHPEGFNALRRMYTSIQEPLSQIGPSGDRAADDGADPRSSLAPLTEA-----PNTAALPNPWAPA 246
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52811.12598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR67_ECTSI8.290e-3475.76Ubiquitin family protein, expressed n=1 Tax=Ectoca... [more]
A0A6H5KF83_9PHAE5.430e-2392.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
I2CQX3_NANGC4.100e-2258.65Ubiquilin n=1 Tax=Nannochloropsis gaditana (strain... [more]
A0A5J4Y3D6_9CHLO5.900e-1942.66Ubiquitin family n=1 Tax=Trebouxia sp. A1-2 TaxID=... [more]
A0A835Z7M7_9STRA8.340e-1970.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2W3L9_9STRA1.060e-1867.37Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3U9N8_9CHLO9.600e-1848.08Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A2P6N1T8_9EUKA2.720e-1753.47Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7R9THW9_9VIRI3.250e-1740.74Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A8J5XJM4_DIALT6.570e-1741.04Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52811contigH-elongata_contig52811:412..3463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score135.2
Seed ortholog evalue2.2e-29
Seed eggNOG ortholog2880.D7FR67
KEGG koko:K04523
KEGG Pathwayko04141,map04141
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0010@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03051,ko04131
Hectar predicted targeting categoryother localisation
Exons4
Model size408
Cds size384
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52811.12598.1prot_H-elongata_contig52811.12598.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52811 412..3439 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930862.479093-CDS-H-elongata_contig52811:411..5701622930862.479093-CDS-H-elongata_contig52811:411..570Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52811 412..570 -
1691679602.2007608-CDS-H-elongata_contig52811:411..5701691679602.2007608-CDS-H-elongata_contig52811:411..570Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52811 412..570 -
1622930862.4954865-CDS-H-elongata_contig52811:1127..12201622930862.4954865-CDS-H-elongata_contig52811:1127..1220Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52811 1128..1220 -
1691679602.219843-CDS-H-elongata_contig52811:1127..12201691679602.219843-CDS-H-elongata_contig52811:1127..1220Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52811 1128..1220 -
1622930862.514748-CDS-H-elongata_contig52811:2598..26881622930862.514748-CDS-H-elongata_contig52811:2598..2688Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52811 2599..2688 -
1691679602.2331192-CDS-H-elongata_contig52811:2598..26881691679602.2331192-CDS-H-elongata_contig52811:2598..2688Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52811 2599..2688 -
1622930862.528105-CDS-H-elongata_contig52811:3397..34391622930862.528105-CDS-H-elongata_contig52811:3397..3439Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52811 3398..3439 -
1691679602.2453415-CDS-H-elongata_contig52811:3397..34391691679602.2453415-CDS-H-elongata_contig52811:3397..3439Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52811 3398..3439 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930862.5418353-UTR-H-elongata_contig52811:3439..34631622930862.5418353-UTR-H-elongata_contig52811:3439..3463Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52811 3440..3463 -
1691679602.2551732-UTR-H-elongata_contig52811:3439..34631691679602.2551732-UTR-H-elongata_contig52811:3439..3463Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52811 3440..3463 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52811.12598.1

>prot_H-elongata_contig52811.12598.1 ID=prot_H-elongata_contig52811.12598.1|Name=mRNA_H-elongata_contig52811.12598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
MLRSIMFSNPQMQQQVMQNNPQLAQVLNDPATMRQYLEMARNPAAMEQAR
RSQDLMMSQIENQPGGFNALRRIYAEVQEPMMQASEGMANVGGAGAAGSN
NRAPAPAPNPSGGPNTSALPNPWAPAG*
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mRNA from alignment at H-elongata_contig52811:412..3463-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52811.12598.1 ID=mRNA_H-elongata_contig52811.12598.1|Name=mRNA_H-elongata_contig52811.12598.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3052bp|location=Sequence derived from alignment at H-elongata_contig52811:412..3463- (Himanthalia elongata Himel1 dioecious)
CAGGGACTGCTCAACAACCCGGAGATGCTGCGGAGCATTATGTTTAGCAA
CCCTCAAATGCAACAGGTGCGGTTATCGCTTTTTATAACATGGCGTTCCT
CCGTAGACTTGAGGCGCACCCCGGGGATGAAATATTTTTATCCCCCCGCA
CTGTTTTGTGTGAACCACGCGGGATTGGTGTATTATTGTAGACTGTGCTT
TGATGTCGTGGACTGCGTCGTTAGAACGATCTCGCCCGAGGGTAGCACGC
GAGGAAACATTGGTAGGGGACAATCGTTAACCATCTCCGAGGAGCACCCA
TCAACCAACCCTAGGGTAAAACCCTTCATTCAACACCGAAGGTTGTAGTT
GGGAGGGGGGGGCGAAGCCGTGCTGCCGTGTGTGGCTCAACGCTACGGAG
GAGAGTTTTTTTTCGGTGACCCTACTAGCAGTACGGAGCCTTTTTCTGAA
CATTGTCTCGTGGGGAAACGCCGGAACAGTGAAGGTCGATCAAGGCAACG
ATAATTTTCTAGATCTATGTATCTATGTCACCAAAGCCCCGTGCAAAAAA
GTGTGGATAGTCCGAGGGTTGGATTGTTTAATACTCTAGGTGCTCGACCA
AACCCCACCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCNNNNNNNNNN
CCCGGGGAAAAAAGGGGGGGGTGGGCCGGGGGGTGGATTGTTTAATCCCC
GAGGGGGCGCCCCCCCCCCCCCCCCCCCCCCCTCATTGCCTCCCCCTGTT
TACTTTCCCGCCCTCCGCGGTAGAGCAGGTGATGCAAAACAACCCCCAGC
TCGCGCAGGTCCTTAACGACCCGGCAACCATGCGCCAGTACCTCGAGATG
GCTCGTAATCCAGCGGTGAGCGCATATATTTTAGTAATAGATATAGAGGA
GACCTCCCTCCTGCGCGTTGTAGTATATAATACCATGTCTACATATCTAG
CGATAATGTCTTTTCTGTTTTCGCGCAGCGCGGCACTATGTCTTCTCTTT
TTTGCAGCAGCAGAAACGTCTCTGGTTGGCCTCGTTTACCATTTATGATG
ATTATTATTAATGTGTTGCATTTGGCTTAACTCCGAGAGGTAGATTAATG
TCTTTGTTTTAGTATTGTGTTTTTTTGTGTGTAATTTTTATTTCGCTGTC
GAGTCGAGAAGACATGGTGCCGGATTGACAGCAAAACTCTGTTAATGAGT
GTAGAAAGATGTCTCCTTGGTCACGTCTGATGAGAGTTTTTTTTAGAAAA
TATTATTGAATCCCCTTCTGGGAGGATCAATGCGAGAGTAGCCTAGGAGG
ACTAACTAGCATGACAGGGCCGGATTGCGCGGTTGTATGTAATTTAATAA
ACACACACAGAAGAAACATCCACGCTATATACTATATATTATATACTATA
TACTGTGATTGATATATTGTTTTTGATTGAATTCTCACATAAGCTGATGT
CAAAATCCAGCTCGTGGTCACAGTGTAGAAAAAACACCATCCGGAAAGGA
GAAAAACGTTCAAGGTACTCTCCAATACAAAAGGAAACAGCAATAATGGT
GCACAATACAAATACTCGGAAAAAGCGAAATCTCCAAATAAAAAAAAGAA
ACACAAAAAAGTATCCTATATCCTACATTACACCACTAATAGTAAAAGTC
AAAAGGAAAAACCAAGTATTGTCAGCGCCAAATTATACTAAAAATGTCAT
AGGGGTCGACTTGCCTTCGTCGTTTTTTTGTTGTTGTTTTTCGTGCGGTG
TCGCGGGAGAAAATATCTGCGAGGTATATTTTTTTTGTGAGAGTTTGGAA
GTTTATCGTTGTCGAAGAGAGACTTGGGACTCAGATTGTGTGACGTCTAC
GCTGTTCGCCTCAAACAGCGGGTGGCGGAAATGGAAACTGGTATCGAAAG
AAAACGACTCCTTGACAGCAAGAGCCAATCGGGGACGTTTAACTGGCCAA
GAAGAGGCAGCTGATCGGCGGGAAGAGCGAGCCTATCGGAGCCTTAAAAA
AATGATAATCTGAACGGATACATTATATATCAAACGACACGCGCAACCGC
GTTAACTCAACAGGCTGCTGTATATATATATTTTGGACAAAACTCTGATC
TCTTTCGAAAGCTCCTCACATTGTTACTCTTTATTTTATTTATTTCTATT
TTTCTTGTAAAATCTCGAAATTAACTCACTCGATTCCTCCGGCCTCCTCC
TCGATCATCCATGACATGCCTTCTTTTGACATCGACTTCGCAGGCAATGG
AACAGGCTCGGCGAAGTCAAGACCTAATGATGAGCCAAATCGAAAACCAA
CCCGGGGGCTTCAACGCGCTTCGCAGGATCTACGCGGTGAGTTTTGCTTG
ACGGCCATATCATGCCTAGGGAAGAGAGCGCTATTTTTACTCTTTTTTNN
NNNNNNNNAAACAAGACCCACGCGGGTAGACGTCAATCCGGGACAATCCG
TGCTGAGGGACGGGAGCGCGATTTTTTTTCTTTTTTTTTGAATCGATCTT
GTCTCGGAAAGAGAGCGCTATTTTGACTCTTTTTTTTTTTAATCGATCTT
AAGTCGGGAAGAGAGCGTCATTTTCCATTTTCACTCTTTTTATCAGTCTA
ATTGTTTTGGTCTCGCGCGGTCGCCCAATTAACCAGGGAAAGAAAAACAC
TACCTAAAAAGTGGTGACCGTCTATCACACACACCTAAAACCCCGGCCAT
TTTTGTTTTGTTGCCTTTCTGGATTATAGGTTTCTCGGCAAACACCCCCT
AAAAACCTGTCAATCCAACCCGATTACGACGATATTCAATCCTGCGTCTT
CTCGCCTTCTTGAATGTCGAACTCCCTTGACCGCCCCCCCTCTCCCCTCC
CCTTCTCCCCCCCCCCAATCGCCACCTCCTTACCAAAACTCAGGAGGTGC
AGGAACCAATGATGCAGGCGAGCGAAGGCATGGCCAACGTGGGAGGCGCC
GGTGCTGCAGGATCGAACAATCGTGCCCCGGCGCCTGCGCCTAACCCGTC
CGGAGGACCCAACACATCGGCGCTCCCAAACCCGTGGGCTCCCGCTGGGT
GA
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Coding sequence (CDS) from alignment at H-elongata_contig52811:412..3463-

>mRNA_H-elongata_contig52811.12598.1 ID=mRNA_H-elongata_contig52811.12598.1|Name=mRNA_H-elongata_contig52811.12598.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=768bp|location=Sequence derived from alignment at H-elongata_contig52811:412..3463- (Himanthalia elongata Himel1 dioecious)
ATGCTGCGGAGCATTATGTTTAGCAACCCTCAAATGCAACAGATGCTGCG
GAGCATTATGTTTAGCAACCCTCAAATGCAACAGCAGGTGATGCAAAACA
ACCCCCAGCTCGCGCAGGTCCTTAACGACCCGGCAACCATGCGCCAGTAC
CTCGAGATGGCTCGTAATCCAGCGCAGGTGATGCAAAACAACCCCCAGCT
CGCGCAGGTCCTTAACGACCCGGCAACCATGCGCCAGTACCTCGAGATGG
CTCGTAATCCAGCGGCAATGGAACAGGCTCGGCGAAGTCAAGACCTAATG
ATGAGCCAAATCGAAAACCAACCCGGGGGCTTCAACGCGCTTCGCAGGAT
CTACGCGGCAATGGAACAGGCTCGGCGAAGTCAAGACCTAATGATGAGCC
AAATCGAAAACCAACCCGGGGGCTTCAACGCGCTTCGCAGGATCTACGCG
GAGGTGCAGGAACCAATGATGCAGGCGAGCGAAGGCATGGCCAACGTGGG
AGGCGCCGGTGCTGCAGGATCGAACAATCGTGCCCCGGCGCCTGCGCCTA
ACCCGTCCGGAGGACCCAACACATCGGCGCTCCCAAACCCGTGGGCTCCC
GCTGGGTGAGAGGTGCAGGAACCAATGATGCAGGCGAGCGAAGGCATGGC
CAACGTGGGAGGCGCCGGTGCTGCAGGATCGAACAATCGTGCCCCGGCGC
CTGCGCCTAACCCGTCCGGAGGACCCAACACATCGGCGCTCCCAAACCCG
TGGGCTCCCGCTGGGTGA
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