prot_H-elongata_contig52749.12589.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52749.12589.1
Unique Nameprot_H-elongata_contig52749.12589.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
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BLAST of mRNA_H-elongata_contig52749.12589.1 vs. uniprot
Match: D7G7I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I0_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 1.330e-7
Identity = 26/38 (68.42%), Postives = 34/38 (89.47%), Query Frame = 0 
Query:    1 ARLKAELAVFDLGFFEELEDLKYSYAKLKRETEALAKR 38
            A+L++EL VFDLGFFEE+EDLKYSYA L+RE + LA++
Sbjct:  428 AKLRSELEVFDLGFFEEVEDLKYSYASLRREADKLARK 465
[Close]
BLAST of mRNA_H-elongata_contig52749.12589.1 vs. uniprot
Match: A0A6H5JNM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM1_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.330e-7
Identity = 26/38 (68.42%), Postives = 34/38 (89.47%), Query Frame = 0 
Query:    1 ARLKAELAVFDLGFFEELEDLKYSYAKLKRETEALAKR 38
            A+L++EL VFDLGFFEE+EDLKYSYA L+RE + LA++
Sbjct:  419 AKLRSELEVFDLGFFEEVEDLKYSYASLRREADKLARK 456
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52749.12589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7I0_ECTSI1.330e-768.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNM1_9PHAE1.330e-768.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52749contigH-elongata_contig52749:1161..1292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52749.12589.1mRNA_H-elongata_contig52749.12589.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52749 1161..1292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52749.12589.1 ID=prot_H-elongata_contig52749.12589.1|Name=mRNA_H-elongata_contig52749.12589.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
ARLKAELAVFDLGFFEELEDLKYSYAKLKRETEALAKRKVKNPR
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