mRNA_H-elongata_contig115963.1256.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: D7FQJ3_ECTSI (Gamma hydroxybutyrate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQJ3_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.290e-41 Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGRHADDDFCAVIEALRSKP 252
ILGQGAMASPM+ALKGPLM K+DYS+NFPLKHAQKDMRFAL LGDK QALP+ AAANAEY+RAK HADDDFCAV+EALRSKP
Sbjct: 257 ILGQGAMASPMVALKGPLMAKKDYSSNFPLKHAQKDMRFALGLGDKAAQALPVAAAANAEYLRAKKNHADDDFCAVVEALRSKP 340
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: A0A835YH89_9STRA (2-hydroxy-3-oxopropionate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH89_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.720e-31 Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGRHADDDFCAVIEALRSKP 252
ILG GAMA+PM LKGPLM Y+ NFPLKHAQKDMRFAL LG+ Q LP+ AAANAEY+RA + DDDFCAVIEAL+S+P
Sbjct: 214 ILGLGAMANPMFKLKGPLMESGSYAPNFPLKHAQKDMRFALGLGEATAQPLPLAAAANAEYLRALPKFGDDDFCAVIEALKSRP 297
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: A0A7S2V669_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V669_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.250e-24 Identity = 54/81 (66.67%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGRHADDDFCAVIEALR 243
IL GAMA+PM LKGP M K Y NFPLKHAQKDMRFAL LGD++ LP AAAN EY+RA+ HADDDF AV+EA+R
Sbjct: 241 ILDLGAMANPMFKLKGPTMIKGAYPANFPLKHAQKDMRFALKLGDELGAPLPAAAAANEEYIRARV-HADDDFAAVMEAIR 320
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: A0A7S2C990_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C990_9STRA) HSP 1 Score: 100 bits (248), Expect = 4.660e-23 Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGRHADDDFCAVIEALR 243
+L G M+SP+I LKGP + K+ Y T FPLKHAQKDMRFALALGD++ QALP+ AAAN + RA+ DDDF AV EALR
Sbjct: 19 VLELGVMSSPLIKLKGPNLVKRKYPTQFPLKHAQKDMRFALALGDEVGQALPLAAAANESFKRARRDCGDDDFSAVYEALR 99
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: D8U8A6_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8A6_VOLCA) HSP 1 Score: 95.9 bits (237), Expect = 4.550e-22 Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGR-HADDDFCAVIEALRSK 249
ILG GAMA+PM ALKGP + ++Y FPLKH QKD+R ALALGD + Q LP+ AAAN + AK + HAD+DF AV EA + K
Sbjct: 212 ILGLGAMANPMFALKGPAIMSRNYPPAFPLKHQQKDLRLALALGDALNQPLPVAAAANEAFKNAKAKGHADEDFAAVYEATQQK 295
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: A0A383VW99_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VW99_TETOB) HSP 1 Score: 93.6 bits (231), Expect = 4.050e-21 Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGR-HADDDFCAVIEALR 243
+LG GAMA+PM ALKGP + ++ Y FPLKH QKDMR ALALGD + Q LP+ AAAN Y +AK + +AD DF AV EA +
Sbjct: 218 VLGLGAMANPMFALKGPALQQRQYPPAFPLKHQQKDMRLALALGDALDQPLPVAAAANEAYKQAKSKGYADADFAAVYEATQ 299
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: A0A7S0WG56_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WG56_9CHLO) HSP 1 Score: 93.2 bits (230), Expect = 4.390e-21 Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGR-HADDDFCAVIEALR 243
+L GAMA+PM ALKGP + K+++ FPLKH QKDMR ALALGD++ Q LPI AA+N Y +AK HAD+DF A+ A R
Sbjct: 205 VLSLGAMANPMFALKGPAVMKREFPPAFPLKHQQKDMRLALALGDELNQPLPIAAASNERYKQAKAAGHADNDFAAIYNATR 286
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: A0A7S2F2B8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2B8_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 5.080e-21 Identity = 46/83 (55.42%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGRHADDDFCAVIEALRSK 249
IL +G M P++ LKGP + + Y T+FPLKHAQKD+RFALALGD++ Q+LPI + AN ++RAK H D DF AV EA+ S+
Sbjct: 139 ILKKGVMGCPLVTLKGPNIVSRTYDTHFPLKHAQKDLRFALALGDEVGQSLPICSVANECFVRAKPVHGDSDFSAVYEAMMSQ 221
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: A0A250X3K1_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X3K1_9CHLO) HSP 1 Score: 92.8 bits (229), Expect = 6.550e-21 Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGR-HADDDFCAVIEALR 243
++G GA+ASP++A+KGP M ++Y+ FPLKH QKDMR ALALGD++ Q+LP+ AAAN ++ A+ R H D+D AV EA +
Sbjct: 211 VMGIGALASPLVAMKGPAMMSKNYAPAFPLKHQQKDMRLALALGDQLGQSLPVAAAANEQFKVARARGHGDEDIAAVYEATK 292
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Match: A0A7J7Q5T7_9CHLO (NAD binding domain of 6-phosphogluconate dehydrogenase-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q5T7_9CHLO) HSP 1 Score: 92.8 bits (229), Expect = 8.030e-21 Identity = 47/83 (56.63%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1 ILGQGAMASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAANAEYMRAKGR-HADDDFCAVIEALRS 246
+LG GAMA+PM LKGP + ++ Y FPLKH QKDMR ALALGD + QALP+ AAAN Y +AK + + D DF AV EA ++
Sbjct: 219 VLGLGAMANPMFGLKGPALMQRQYPPAFPLKHQQKDMRLALALGDSLNQALPVAAAANEAYKQAKSKGYGDADFAAVYEATQA 301 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115963.1256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig115963.1256.1 >prot_H-elongata_contig115963.1256.1 ID=prot_H-elongata_contig115963.1256.1|Name=mRNA_H-elongata_contig115963.1256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp MASPMIALKGPLMNKQDYSTNFPLKHAQKDMRFALALGDKMLQALPITAAback to top mRNA from alignment at H-elongata_contig115963:1421..1894- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig115963.1256.1 ID=mRNA_H-elongata_contig115963.1256.1|Name=mRNA_H-elongata_contig115963.1256.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=474bp|location=Sequence derived from alignment at H-elongata_contig115963:1421..1894- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig115963:1421..1894- >mRNA_H-elongata_contig115963.1256.1 ID=mRNA_H-elongata_contig115963.1256.1|Name=mRNA_H-elongata_contig115963.1256.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=474bp|location=Sequence derived from alignment at H-elongata_contig115963:1421..1894- (Himanthalia elongata Himel1 dioecious)back to top |