prot_H-elongata_contig52134.12503.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig52134.12503.1
Unique Name	prot_H-elongata_contig52134.12503.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	184

Homology

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: D8LIC7_ECTSI (Intraflagellar transport protein 80 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIC7_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 4.920e-99
Identity = 149/184 (80.98%), Postives = 163/184 (88.59%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGVQV 184
            VWDSFGRQ++QSGGLGY ITSVKWCPNGE+FAVGAFNTLRLCDKTGWSHSR+RPQSGS+TSLTWT DGTQLAAAG NG VV GQVIER LEW  FEA+LV+P KI+VSDV SE+VE+L+F GGRV+EMSL FGHLVAAT NQV IYSV NWNTP+ILDMR   SLIVQAET FLTLD  QGVQ+
Sbjct:  207 VWDSFGRQMFQSGGLGYTITSVKWCPNGETFAVGAFNTLRLCDKTGWSHSRDRPQSGSLTSLTWTPDGTQLAAAGGNGSVVFGQVIERSLEWDIFEAVLVSPFKIKVSDVGSEVVEELDFSGGRVVEMSLGFGHLVAATHNQVLIYSVTNWNTPYILDMRGATSLIVQAETQFLTLDTVQGVQI 390

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: A0A7S2G6X5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6X5_9STRA)

HSP 1 Score: 233 bits (594), Expect = 3.560e-69
Identity = 110/182 (60.44%), Postives = 132/182 (72.53%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGV 182
            VWD++GRQL+QS      ITS+ WCPNGE FAVGAFN+LRLCDKTGWS+SR +PQSGSI  + WT DGTQLA AG NG VV  Q+++R LEW NFE  L+ P  I V D S +  E LEF   RV+EM+L +GHLV AT  Q FIY V NWNTPHI D+R+  SLI  A+ +FLT+D + GV
Sbjct:  213 VWDAYGRQLFQSQPNASVITSISWCPNGECFAVGAFNSLRLCDKTGWSYSREQPQSGSIMEIAWTSDGTQLAGAGGNGSVVFAQLVQRKLEWENFEVTLIEPKLINVQDASIDQYERLEFPRERVVEMALGWGHLVVATATQCFIYGVNNWNTPHIFDLRATPSLISLADGYFLTMDPTHGV 394

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: A0A8K1CRT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRT4_PYTOL)

HSP 1 Score: 229 bits (583), Expect = 1.260e-67
Identity = 104/184 (56.52%), Postives = 131/184 (71.20%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGVQV 184
            VWD+FGRQLYQS  +G+ ITSV WCPNGE+FAVG++N LRLCDKTGWS+ R RP+ GS+  + W  D TQL  AG NG  V  QV++R L W   E  LV+P KI V DV +E +E+++F+  RVIEMS   G L+  T  Q FIY+  NWNTPHI D+RS  +LI+Q+E HFLT+D   G+QV
Sbjct:  209 VWDAFGRQLYQSPAVGHVITSVAWCPNGETFAVGSYNMLRLCDKTGWSYCRERPKCGSLMDIAWASDSTQLVGAGGNGATVFAQVVDRVLSWNKIEIKLVDPRKIHVHDVMNETLEEIDFVRDRVIEMSFGHGFLIVCTATQCFIYNSQNWNTPHIFDLRSTVNLIIQSECHFLTVDNFNGLQV 392

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: A0A0P1B1S3_PLAHL (WD40 repeat-containing protein CHE-2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1S3_PLAHL)

HSP 1 Score: 225 bits (573), Expect = 3.500e-66
Identity = 105/184 (57.07%), Postives = 128/184 (69.57%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGVQV 184
            VWD+FGRQLYQS    + ITS+ WCPNG  FAVG++N LRLCD+TGWS+ R RPQSGS+  L W+ D TQL AAG NG  V  QV+ R L W   E  LV+P KI V DV +E +E+L+F   RV+EMS A G LV  T  Q FIY   +WNTPHI D+R+  SL+VQ+E HFLT+D   G+QV
Sbjct:  209 VWDAFGRQLYQSPAGEHVITSIAWCPNGNCFAVGSYNLLRLCDQTGWSYCRQRPQSGSLMDLAWSSDSTQLVAAGGNGATVFAQVVGRMLPWKKVEVTLVDPRKIHVHDVVNETLEELDFARDRVVEMSFAHGFLVVCTATQCFIYDAQSWNTPHIFDLRAAVSLLVQSENHFLTVDHFNGIQV 392

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: A0A2D4BW51_PYTIN (Intraflagellar Transport protein 80 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW51_PYTIN)

HSP 1 Score: 227 bits (579), Expect = 3.520e-66
Identity = 104/184 (56.52%), Postives = 130/184 (70.65%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGVQV 184
            VWD+FGRQLYQS    + ITSV WCPNGE+FAVG++N LRLCDKTGWS+ R RP  GS+  + W  D TQL AAG NG  V  QV+ER L W   E  LV+P KI V DV +E +E+++F+  RVIEMS  +G L+  T  Q FIY+  NWNTPHI D+R+  +LIVQ+E HF+T+D   G+QV
Sbjct:  209 VWDAFGRQLYQSSAGEHVITSVAWCPNGETFAVGSYNLLRLCDKTGWSYCRERPNCGSLMDIAWASDSTQLVAAGGNGATVFAQVVERVLAWNKIEIKLVDPRKIHVHDVMNETLEEIDFVRDRVIEMSFGYGFLIVCTATQCFIYNSQNWNTPHIFDLRTTVNLIVQSECHFITVDNFNGIQV 392

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: H3GA28_PHYRM (Uncharacterized protein n=27 Tax=Peronosporaceae TaxID=4777 RepID=H3GA28_PHYRM)

HSP 1 Score: 224 bits (572), Expect = 4.880e-66
Identity = 105/184 (57.07%), Postives = 128/184 (69.57%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGVQV 184
            VWD+FGRQLYQS    + +TSV WCPNG  FAVG++N LRLCD+TGWS+ R RPQSGS+  L W  D TQL AAG NG  V  QV+ R L W   E  LV+P KI V DV +E +E+L+F   RV+EMS A G LV  T  Q FIY   +WNTPHI D+R+  SL+VQ+E+HFLT+D   G+QV
Sbjct:  209 VWDAFGRQLYQSPAGEHVVTSVAWCPNGSCFAVGSYNMLRLCDQTGWSYCRQRPQSGSLMDLAWASDSTQLIAAGGNGATVFAQVVGRILPWKKVEVTLVDPRKIHVHDVVNETLEELDFARDRVVEMSFAHGFLVVCTATQCFIYDAQSWNTPHIFDLRAAVSLLVQSESHFLTVDNFNGIQV 392

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: A0A835ZN10_9STRA (Intraflagellar transport protein 80 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZN10_9STRA)

HSP 1 Score: 224 bits (571), Expect = 7.000e-66
Identity = 99/184 (53.80%), Postives = 131/184 (71.20%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGVQV 184
            VWD+FGR L+ S  LG+ +T+V W P GE+FAVGAFN LR+CD+TGW+ +R RPQ GS+ ++ W  DGTQL   G NG +VV QV+ R L W  +EA+LV   K+ ++DV  E  E+LEF   RV++M+L  GHLV AT +Q ++Y+  NWNTPHILDMR+ ASL+  A  HFLT+D   GVQ+
Sbjct:  207 VWDAFGRALFASAPLGHVVTAVAWAPGGEAFAVGAFNALRVCDRTGWTRARERPQCGSVMAIAWAADGTQLVGGGGNGKLVVAQVVGRSLHWDRYEAVLVESHKVAIADVGGETREELEFARDRVVDMALGHGHLVVATASQCYVYAAPNWNTPHILDMRAPASLLALAAKHFLTVDALSGVQI 390

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: K3WVM6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVM6_GLOUD)

HSP 1 Score: 224 bits (570), Expect = 9.240e-66
Identity = 102/184 (55.43%), Postives = 130/184 (70.65%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGVQV 184
            VWD+FGRQLYQS    + ITS+ WCPNG +FAVG++N LRLCDKTGWS+ R RP+ GS+  + W  D TQL AAG NG  V  QVIER + W   E  LV+P KI V DV +E +E+++F+  RVIEMS  FG L+  T  Q FIY+  NWNTPHI D+R+  +LI+Q+E HF+T+D   G+QV
Sbjct:  208 VWDAFGRQLYQSPAGEHVITSIAWCPNGGTFAVGSYNMLRLCDKTGWSYCRERPKCGSLMDIAWASDSTQLVAAGGNGATVFAQVIERVVTWNKIEIKLVDPRKIHVHDVMNETLEEIDFVRDRVIEMSFGFGFLIVCTATQCFIYNSQNWNTPHIFDLRATVNLIIQSECHFITVDNFNGIQV 391

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: A0A485L4J2_9STRA (Aste57867_15463 protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A485L4J2_9STRA)

HSP 1 Score: 224 bits (570), Expect = 9.890e-66
Identity = 101/184 (54.89%), Postives = 130/184 (70.65%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGVQV 184
            VWD FGRQLYQS    + ITS+ W P G++FAVGAFN LRLCDKTGWS+ R RP+SGS+  + W  DGTQL AAG NG  V  QV++R L+W   E  L +P KI V DV +E VE+L+F+  RVI+MSL +G L+  T  Q FIY+  NWNTPHI D+R+  + I+Q+E HF+T+D   G+Q+
Sbjct:  209 VWDGFGRQLYQSPVCEHVITSIAWSPKGDTFAVGAFNMLRLCDKTGWSYCRERPKSGSLMDIAWASDGTQLVAAGGNGATVFAQVVDRHLQWNKIEVTLKDPRKIHVHDVLNETVEELDFVRDRVIDMSLGYGFLIVCTATQCFIYNFQNWNTPHIFDLRAAVNFILQSECHFITVDNFYGIQI 392

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BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Match: A0A6G0X3K3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3K3_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.900e-65
Identity = 102/184 (55.43%), Postives = 126/184 (68.48%), Query Frame = 0

Query:    1 VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHSRNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILVNPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFNWNTPHILDMRSGASLIVQAETHFLTLDISQGVQV 184
            VWD FGRQLYQS    + I+S+ W P GE FAVGAFN LRLCDKTGWS+SR RP  GS+  + W  DGTQL AAG NG  +  QV+ER L+W   E  L  P KI V DV +E VE+L+F   RVIEMSL +G L+  T  Q F+Y+  NWNTPHI D+R+  + I+Q+E HFLT+D   G+Q+
Sbjct:  209 VWDGFGRQLYQSPVCDHVISSISWSPKGELFAVGAFNMLRLCDKTGWSYSRERPTCGSLMDIAWASDGTQLVAAGGNGATLFAQVVERHLQWNKIEVTLKEPRKIHVHDVLNETVEELDFARDRVIEMSLGYGFLIVCTATQCFLYNFQNWNTPHIFDLRAAVNFIIQSECHFLTVDNFAGIQI 392

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot

BLAST of mRNA_H-elongata_contig52134.12503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIC7_ECTSI	4.920e-99	80.98	Intraflagellar transport protein 80 n=2 Tax=Ectoca...	[more]
A0A7S2G6X5_9STRA	3.560e-69	60.44	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A8K1CRT4_PYTOL	1.260e-67	56.52	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A0P1B1S3_PLAHL	3.500e-66	57.07	WD40 repeat-containing protein CHE-2 n=1 Tax=Plasm...	[more]
A0A2D4BW51_PYTIN	3.520e-66	56.52	Intraflagellar Transport protein 80 n=1 Tax=Pythiu...	[more]
H3GA28_PHYRM	4.880e-66	57.07	Uncharacterized protein n=27 Tax=Peronosporaceae T...	[more]
A0A835ZN10_9STRA	7.000e-66	53.80	Intraflagellar transport protein 80 n=1 Tax=Tribon...	[more]
K3WVM6_GLOUD	9.240e-66	55.43	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A485L4J2_9STRA	9.890e-66	54.89	Aste57867_15463 protein n=9 Tax=Aphanomyces TaxID=...	[more]
A0A6G0X3K3_9STRA	1.900e-65	55.43	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..162 e-value: 8.7E-10 score: 39.7
None	No IPR available	PANTHER	PTHR24098	FAMILY NOT NAMED	coord: 1..184
None	No IPR available	PANTHER	PTHR24098:SF0	INTRAFLAGELLAR TRANSPORT 80 HOMOLOG (CHLAMYDOMONAS)	coord: 1..184
None	No IPR available	SUPERFAMILY	82171	DPP6 N-terminal domain-like	coord: 1..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig52134	contig	H-elongata_contig52134:1981..3376 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig52134.12503.1	mRNA_H-elongata_contig52134.12503.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig52134 1981..3376 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig52134.12503.1 ID=prot_H-elongata_contig52134.12503.1|Name=mRNA_H-elongata_contig52134.12503.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp
VWDSFGRQLYQSGGLGYAITSVKWCPNGESFAVGAFNTLRLCDKTGWSHS
RNRPQSGSITSLTWTLDGTQLAAAGANGDVVVGQVIERFLEWGNFEAILV
NPGKIRVSDVSSEMVEDLEFLGGRVIEMSLAFGHLVAATQNQVFIYSVFN
WNTPHILDMRSGASLIVQAETHFLTLDISQGVQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf