prot_H-elongata_contig100086.12.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100086.12.1
Unique Nameprot_H-elongata_contig100086.12.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: D8LSW9_ECTSI (Peptidyl-tRNA hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW9_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.130e-48
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMTRFNG 104
            ++LVDEVALDFGQLRLKGKGG GGHNGLKS+QAHLKTP+YTRLRIG+G  K +     LSD+VLGEFTR+EK+ELD+VIA+ACDAVE W+EEED+ KVMTRFN 
Sbjct:   73 IVLVDEVALDFGQLRLKGKGGAGGHNGLKSLQAHLKTPEYTRLRIGVGASKFSEA---LSDHVLGEFTRTEKKELDNVIADACDAVEHWVEEEDMAKVMTRFNS 173          
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: A0A6H5JIA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA6_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.350e-46
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMTRFNG 104
            ++LVDEVALDFGQLRLKGKGG GGHNGLKS+QAHLKTP+YTRLRIG+G  K +     LSD+VLGEFTR+EK+ELD+VIA+ACDAVE WIEEED+ KVMTRFN 
Sbjct:  262 IVLVDEVALDFGQLRLKGKGGAGGHNGLKSLQAHLKTPEYTRLRIGVGASKFSEA---LSDHVLGEFTRTEKKELDNVIADACDAVEHWIEEEDMAKVMTRFNS 362          
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: A0A836CKJ3_9STRA (Peptidyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKJ3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.490e-30
Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMTRFNGR 105
            ++L D+VALDFG LRL+ KG  GGHNGLKS+Q HL T DY RLRIG+G  ++      L  +VLGEF++ E++ELD V+++A   VE WI E+D   VMT  NG+
Sbjct:   73 LVLTDDVALDFGALRLRMKGSAGGHNGLKSLQQHLGTQDYARLRIGVGAPRK-----DLVSHVLGEFSKVERKELDMVVSDAASVVEHWIAEDDAALVMTAINGK 172          
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: A0A7V4KMS0_9BACT (Peptidyl-tRNA hydrolase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7V4KMS0_9BACT)

HSP 1 Score: 112 bits (281), Expect = 2.970e-29
Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMTRFNG 104
            ++LVD+VAL  G  RL+G G PGGHNGLKSI+A L+  DY RLRIG+G      G   L+D+VLGEF+R+E+R L+  +    DA ECW+EE  I+K M+RFN 
Sbjct:   88 LVLVDDVALPLGTFRLRGAGSPGGHNGLKSIEATLRRRDYARLRIGVGPVP--AGVDDLADFVLGEFSRAERRTLEDQLDRMADACECWVEE-GIEKAMSRFNA 188          
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: A0A4D9CWV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.260e-29
Identity = 56/104 (53.85%), Postives = 78/104 (75.00%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMTRFNG 104
            +++VDEVALD GQ+RL+  G  GGHNGLKSI++ LK  DY RLRIG+GG      PG + D+VLG+F+RSE++ LD ++ +A +A+E WIE+++ DKVM R N 
Sbjct:  833 LVVVDEVALDIGQIRLRQTGSAGGHNGLKSIESCLKCKDYNRLRIGVGG----AAPGSMVDHVLGQFSRSERKVLDDMLIDAVEAIEDWIEDDNTDKVMNRVNA 932          
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: A0A2V5MGH1_9BACT (Aminoacyl-tRNA hydrolase (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5MGH1_9BACT)

HSP 1 Score: 109 bits (272), Expect = 4.090e-28
Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACG---PGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMTRFNGR 105
            ++++D+  L FG++R++ +G  GGH+GL+SI+AHL T  Y RLRIGIG E  ACG   P  +S YVL  F  ++   L+ V+  ACD VECW++E  + K M+R+NGR
Sbjct:   58 LVVMDDADLPFGEIRMRAEGSSGGHHGLESIEAHLGTRQYARLRIGIGREALACGQHAPREISGYVLAPFRAADAELLEKVLTRACDQVECWLDE-GVGKAMSRYNGR 164          
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: A0A7X0LLG6_9BACT (Peptidyl-tRNA hydrolase n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0LLG6_9BACT)

HSP 1 Score: 108 bits (269), Expect = 1.770e-27
Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMTRFNG 104
            +ILVDE+ALD GQ+RL+  G PGGHNGLK ++  L T DY RLR+GIG   RA    P  D+VLG FT  +  E++  + +ACD +E W+E+  I+  MT+FNG
Sbjct:   87 LILVDEIALDVGQIRLRASGSPGGHNGLKDLERALGTRDYPRLRLGIGPRTRA----PQVDFVLGRFTGEQLDEMNFTLGKACDCIESWLED-GIELAMTKFNG 185          
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: A0A6M1YZS9_9BACT (Peptidyl-tRNA hydrolase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1YZS9_9BACT)

HSP 1 Score: 103 bits (257), Expect = 1.420e-25
Identity = 48/92 (52.17%), Postives = 68/92 (73.91%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEE 92
            +++ D+VAL FGQLR++ KG PGGHNGLKS+QA+L T +YTRLR+G+G + +    G LSDYVLG+FT  E++ L  V+  +  A+E W+ E
Sbjct:   93 IVVTDDVALPFGQLRIRQKGSPGGHNGLKSVQAYLGTEEYTRLRVGVGDQSK----GELSDYVLGKFTAEEQQLLPDVVDRSTRAIELWLTE 180          
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: UPI001B8CDB5C (aminoacyl-tRNA hydrolase n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8CDB5C)

HSP 1 Score: 103 bits (256), Expect = 1.650e-25
Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMTRFNG 104
            + +VD+VAL FG+LRL+GKG  GGHNGLKS+ A LKT +Y RLRIGIG E        L+D+VLG F+ +E+  L  +   A DAVE W+++  I+  M RFN 
Sbjct:   88 LAIVDDVALPFGRLRLRGKGSAGGHNGLKSLAAKLKTENYARLRIGIGPEHPVRN---LADFVLGNFSAAERAALPELTTRAADAVEAWVQQ-GIEPAMARFNA 187          
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Match: A0A7W1VQY8_9BACT (Peptidyl-tRNA hydrolase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7W1VQY8_9BACT)

HSP 1 Score: 99.0 bits (245), Expect = 1.020e-23
Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 0
Query:    1 MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGEKRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMTRFNG 104
            ++LVD+  L  GQ+RL+GKG  GGH+G+ SI+ HL T D+ RLRIGIG  ++      +++YVLG+F   E   L  V+  A D VE W++E  I+K MT+FNG
Sbjct:   91 LVLVDDADLPLGQIRLRGKGSSGGHHGIDSIEQHLGTQDFPRLRIGIG--RKQSNVREITNYVLGQFGADENELLGKVLTRASDQVESWLDE-GIEKAMTKFNG 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100086.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW9_ECTSI1.130e-4875.96Peptidyl-tRNA hydrolase n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIA6_9PHAE1.350e-4676.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKJ3_9STRA3.490e-3053.33Peptidyl-tRNA hydrolase n=1 Tax=Tribonema minus Ta... [more]
A0A7V4KMS0_9BACT2.970e-2953.85Peptidyl-tRNA hydrolase n=1 Tax=Gemmatimonadetes b... [more]
A0A4D9CWV7_9STRA3.260e-2953.85Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2V5MGH1_9BACT4.090e-2847.22Aminoacyl-tRNA hydrolase (Fragment) n=1 Tax=Verruc... [more]
A0A7X0LLG6_9BACT1.770e-2750.96Peptidyl-tRNA hydrolase n=1 Tax=Algisphaera agaril... [more]
A0A6M1YZS9_9BACT1.420e-2552.17Peptidyl-tRNA hydrolase n=1 Tax=Chlamydiae bacteri... [more]
UPI001B8CDB5C1.650e-2550.96aminoacyl-tRNA hydrolase n=1 Tax=Chloracidobacteri... [more]
A0A7W1VQY8_9BACT1.020e-2347.12Peptidyl-tRNA hydrolase n=1 Tax=Verrucomicrobia ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 1..102
e-value: 1.3E-27
score: 96.8
IPR001328Peptidyl-tRNA hydrolasePANTHERPTHR17224PEPTIDYL-TRNA HYDROLASEcoord: 2..103
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3D3.40.50.1470coord: 1..105
e-value: 8.2E-31
score: 109.0
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 2..103
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01196PEPT_TRNA_HYDROL_2coord: 21..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100086contigH-elongata_contig100086:451..1172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100086.12.1mRNA_H-elongata_contig100086.12.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100086 2..1208 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100086.12.1 ID=prot_H-elongata_contig100086.12.1|Name=mRNA_H-elongata_contig100086.12.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MILVDEVALDFGQLRLKGKGGPGGHNGLKSIQAHLKTPDYTRLRIGIGGE
KRACGPGPLSDYVLGEFTRSEKRELDSVIAEACDAVECWIEEEDIDKVMT
RFNGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001328Pept_tRNA_hydro
IPR036416Pept_tRNA_hydro_sf
IPR018171Pept_tRNA_hydro_CS