prot_H-elongata_contig51769.12449.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51769.12449.1
Unique Nameprot_H-elongata_contig51769.12449.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length372
Homology
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: D8LPN2_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPN2_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 6.400e-103
Identity = 234/394 (59.39%), Postives = 267/394 (67.77%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCI---DGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTKASARA--ENVVARTIRLGKEVTGKEALEALKRDERRKGQADPLVSLFLSGSSP-----PPSINGPSTEDRAKRS-------VASDDTASADPRGSDWASKQGGRKKSSXXXXXXXXXXXXXXX------SVRDRDVNRGDSDTDAGHSLGDDEGSAKDITRQQQLEELRQRRLAREGGERERQIRLLAERQMAGLSFPDERRMSYNNQYNATVARQNRLR 371
            MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAA AR+RARE+ QEGIVETL+KKR  S +I        A   PASR+R    K +      +  GG GQGWG T  HVNLFS+AEREA K LGQN D+Q EK+EQEL+ QQRSGLAPTALGEGSAELK   SQPWYTQ +  + A    V ART+RLG+EVTG+EA EA+KRD+ RKGQADP+ SLF SG+ P     P    G S +  A  +       +  D+  S   RG              XXXXXXXXXXXXXXX      S RDR   R  SD+ AG S G  +  A D  R+Q+L++LR RRLAREGGERERQIRLLAER+MAG S PDER  +YNNQYNA  ARQNR+R
Sbjct:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGEANA--ASGTPASRRRRGQDKRRSQDRDEEALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQPQSTACVSKVAARTVRLGREVTGQEAEEAIKRDQGRKGQADPMGSLFRSGAQPMRGSLPLERRGTSYQPEAATANLPGAAGLCVDEATSHSNRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTRSDRDRFARR-HSDSAAGLSGGRAD-EATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAGQSLPDERTRAYNNQYNAPAARQNRIR 390          
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A836CIP7_9STRA (Cir_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.790e-32
Identity = 97/223 (43.50%), Postives = 132/223 (59.19%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYIS----SSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALG-EGSAELKGVNSQPWYTQ--TKASARAENVVARTIRLGKEVTGKEALEALKRDERRKGQADPLVSLF 216
            MSGRLIILPKKSWH  +R+N+E+V RDERLAAE   EA ++A+  +QE  VETL +KR       S+     RGR++++  A RK G  G         GG  QGWG    HVNLF E E  +    G N ++  EK++QEL  Q+R G AP ALG + + EL+     PWY++  + A+A+A    A  +  G+E+ G+ A  AL RD+RRK   DP+ +L 
Sbjct:    1 MSGRLIILPKKSWHVWRRDNLERVKRDERLAAEAQEEADEKAQRADQEIRVETLKRKREQQHQQPSAKVGDGRGRKSQKSTA-RKGGDAG---------GGVDQGWGTGAQHVNLFPEPEARS----GGNVEHLREKEQQELLRQRREGAAPVALGGDAAGELQ---LAPWYSKPASAAAAQASTAAATVVVRGRELEGEAAKRALGRDDRRKALLDPMAALI 206          
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A0B2V8L9_TOXCA (Leukocyte receptor cluster member 1-like protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2V8L9_TOXCA)

HSP 1 Score: 65.5 bits (158), Expect = 2.610e-8
Identity = 62/181 (34.25%), Postives = 94/181 (51.93%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSK---KRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQ-NEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTKASARAENVVART 183
            ILPKK WH   +EN+ +V RD++LAAEE    R+RA+   Q+  V  L K   +R ++  +C + R     EE  S        G+G +  +G +G        HVNLF+E E E  K LG  N++Y+ EK+++    + + G+    LGEGS +      + WY Q   S RA ++  +T
Sbjct:    3 ILPKKKWHVRTKENVARVRRDQKLAAEEEQRIRERAQLAEQQFKVNLLRKHADERMLT--LCGTKR-----EEVES--------GEGSVQLEGCSG--------HVNLFAELEEEDRKNLGTGNKEYEEEKRKEREEYESKIGILKY-LGEGSNDF--TKQKSWYEQVP-SKRAGDICKKT 156          
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A2R5LJQ0_9ACAR (Putative leukocyte receptor cluster member 1 (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LJQ0_9ACAR)

HSP 1 Score: 62.8 bits (151), Expect = 1.930e-7
Identity = 54/164 (32.93%), Postives = 80/164 (48.78%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQT 170
            ILPKKSWH   + NIE+V RDE LAAEE  E + R +    E  +  L ++  + S          AK E  S++     K K                  HVN F + E       G+N D++ EK+E++   +++ GL  T LG+GS+E  G +S  WY+++
Sbjct:    4 ILPKKSWHVRTKRNIERVRRDEALAAEEEKEQQRRVQLAESEARINLLREQAKLRSGGQGHSAVDGAKRESLSQEDEDERKQK-----------------EHVNFFDDVESAQRSLHGKNADHEREKKEEQETYEKKIGLL-TYLGQGSSEASGSSS--WYSES 147          
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: UPI0014258B8D (leukocyte receptor cluster member 1 homolog n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258B8D)

HSP 1 Score: 62.0 bits (149), Expect = 5.480e-7
Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTK 171
            ILPKKSWH  K+ENIE+V RDE  AAEE  + + R     QE     L +K   + +     +G++  +                ID Q            H+N F + + E +K  G N D+++EKQ +++  +++ GL  T LG+ SAE + V  +PWY ++K
Sbjct:    3 ILPKKSWHVLKKENIERVRRDEAKAAEEEKQKQARIALAEQEARTARLRQKARKNYNEAVKQQGQQGDDLALV-----------AIDDQ---------PKGHINFFKDIQ-EGKKIGGVNADHEAEKQAEKINYEKKIGLL-TYLGQSSAEAQTV--KPWYQESK 143          
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A293M4V0_ORNER (Cir_N domain-containing protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M4V0_ORNER)

HSP 1 Score: 59.7 bits (143), Expect = 2.040e-6
Identity = 57/164 (34.76%), Postives = 81/164 (49.39%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQT 170
            ILPKKSWH   + NIE+V RDE LAAEE  E + R +    E  +  L ++  + +S        R     A  K+ S       +  Q    Q   D   HVN FSE E        +N D++ EK+E++   +++ GL  T LG+GS E  G +S  WY+Q+
Sbjct:    3 ILPKKSWHVRTKRNIERVRRDEALAAEEEKEQQRRIQLAESEARINLLREQAKLRAS--------RHHSVVADVKQPS-------LSNQDADEQKQRD---HVNFFSEVEGAQRSLHSKNADHEREKKEEQDEYEKKIGLL-TYLGQGSTEASGSSS--WYSQS 145          
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A4D9D443_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D443_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.960e-6
Identity = 62/194 (31.96%), Postives = 96/194 (49.48%), Query Frame = 0
Query:    2 SGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETL-SKKR-----------YISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDG------QGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTKASARAE 177
            SGRLIILPKK+WH   ++N E+VLRDERL  EE A+  ++ R+V ++  +E L ++KR           +  ++  +   G           RG   +G  CI        +G   QG      HV+LF +      KQ G N+DY  E+  QELR ++  G+AP     G  ++K   ++ WY Q + + + +
Sbjct:   22 SGRLIILPKKTWHVWNQDNRERVLRDERLHREEEAKQAEKQRDVARQDRLEMLRARKRQRDEGEDADVSHFEATSASEMGGGGVGALALGASRGLDNEGL-CIPAAKSGYVEGANHQG------HVHLFGQVAEHLAKQAG-NKDYVRERAAQELRKKRAEGVAPW----GFDDVK--PARQWYEQGEPAGQGQ 201          
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A6B2LFR7_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LFR7_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 1.490e-5
Identity = 57/200 (28.50%), Postives = 95/200 (47.50%), Query Frame = 0
Query:    7 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQ-------NEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTKASARAENVVARTIRLGKEVTGKEALEAL 199
            +LP KSWH  K++NI+K+ RDE+   +E A+ + R+ ++  E   E LSKKR IS+            +EP +    +                   D   ++N F EA  EAEKQ  +       N DY  EK+E+E   Q+      + LG+GS E   + ++PW+   K S+     ++   ++ K+   ++ L+A+
Sbjct:    3 LLPHKSWHVWKKDNIQKIDRDEKKYQQELAQLKKRSLDIESERRYERLSKKRKIST------------KEPLNATHQTD------------------DGERNINFF-EALEEAEKQQKRDPRKALPNPDYLKEKEEKE---QKMIHSTTSYLGQGSIER--MKNKPWWWDDKNSSATAEPLSSISKIEKQKRSEDPLQAI 166          
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A7S3XLM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLM5_HETAK)

HSP 1 Score: 53.5 bits (127), Expect = 2.900e-5
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQE 48
            MSGRLIIL  KSWH   ++NIEKV +DERLAAEE  + +++ R V+QE
Sbjct:    1 MSGRLIILRHKSWHVWNQDNIEKVKKDERLAAEEEEKNKEKQRLVDQE 48          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LPN2_ECTSI6.400e-10359.39Cir_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CIP7_9STRA3.790e-3243.50Cir_N domain-containing protein n=1 Tax=Tribonema ... [more]
A0A0B2V8L9_TOXCA2.610e-834.25Leukocyte receptor cluster member 1-like protein n... [more]
A0A2R5LJQ0_9ACAR1.930e-732.93Putative leukocyte receptor cluster member 1 (Frag... [more]
UPI0014258B8D5.480e-732.73leukocyte receptor cluster member 1 homolog n=1 Ta... [more]
A0A293M4V0_ORNER2.040e-634.76Cir_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A4D9D443_9STRA2.960e-631.96Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6B2LFR7_9EUKA1.490e-528.50Uncharacterized protein (Fragment) n=1 Tax=Arcella... [more]
A0A7S3XLM5_HETAK2.900e-560.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..139
NoneNo IPR availableCOILSCoilCoilcoord: 18..48
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainSMARTSM01083Cir_N_3coord: 12..48
e-value: 1.8E-4
score: 30.9
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainPFAMPF10197Cir_Ncoord: 12..48
e-value: 1.2E-7
score: 31.8
IPR039875Leukocyte receptor cluster member 1-likePANTHERPTHR22093LEUKOCYTE RECEPTOR CLUSTER LRC MEMBER 1coord: 4..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51769contigH-elongata_contig51769:937..2557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51769.12449.1mRNA_H-elongata_contig51769.12449.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51769 937..3329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51769.12449.1 ID=prot_H-elongata_contig51769.12449.1|Name=mRNA_H-elongata_contig51769.12449.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=372bp
MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGI
VETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQ
GWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTA
LGEGSAELKGVNSQPWYTQTKASARAENVVARTIRLGKEVTGKEALEALK
RDERRKGQADPLVSLFLSGSSPPPSINGPSTEDRAKRSVASDDTASADPR
GSDWASKQGGRKKSSKKVKKHKHKKHKKHKSVRDRDVNRGDSDTDAGHSL
GDDEGSAKDITRQQQLEELRQRRLAREGGERERQIRLLAERQMAGLSFPD
ERRMSYNNQYNATVARQNRLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019339CIR_N_dom
IPR039875LENG1-like