mRNA_H-elongata_contig51769.12449.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51769.12449.1
Unique NamemRNA_H-elongata_contig51769.12449.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: D8LPN2_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPN2_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 1.480e-100
Identity = 234/394 (59.39%), Postives = 267/394 (67.77%), Query Frame = 1 
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCI---DGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTKASARA--ENVVARTIRLGKEVTGKEALEALKRDERRKGQADPLVSLFLSGSSP-----PPSINGPSTEDRAKRS-------VASDDTASADPRGSDWASKQGGRKKSSXXXXXXXXXXXXXXX------SVRDRDVNRGDSDTDAGHSLGDDEGSAKDITRQQQLEELRQRRLAREGGERERQIRLLAERQMAGLSFPDERRMSYNNQYNATVARQNRLR 1113
            MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAA AR+RARE+ QEGIVETL+KKR  S +I        A   PASR+R    K +      +  GG GQGWG T  HVNLFS+AEREA K LGQN D+Q EK+EQEL+ QQRSGLAPTALGEGSAELK   SQPWYTQ +  + A    V ART+RLG+EVTG+EA EA+KRD+ RKGQADP+ SLF SG+ P     P    G S +  A  +       +  D+  S   RG              XXXXXXXXXXXXXXX      S RDR   R  SD+ AG S G  +  A D  R+Q+L++LR RRLAREGGERERQIRLLAER+MAG S PDER  +YNNQYNA  ARQNR+R
Sbjct:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGEANA--ASGTPASRRRRGQDKRRSQDRDEEALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQPQSTACVSKVAARTVRLGREVTGQEAEEAIKRDQGRKGQADPMGSLFRSGAQPMRGSLPLERRGTSYQPEAATANLPGAAGLCVDEATSHSNRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTRSDRDRFARR-HSDSAAGLSGGRAD-EATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAGQSLPDERTRAYNNQYNAPAARQNRIR 390
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BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A836CIP7_9STRA (Cir_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.140e-30
Identity = 97/223 (43.50%), Postives = 132/223 (59.19%), Query Frame = 1 
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYIS----SSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALG-EGSAELKGVNSQPWYTQ--TKASARAENVVARTIRLGKEVTGKEALEALKRDERRKGQADPLVSLF 648
            MSGRLIILPKKSWH  +R+N+E+V RDERLAAE   EA ++A+  +QE  VETL +KR       S+     RGR++++  A RK G  G         GG  QGWG    HVNLF E E  +    G N ++  EK++QEL  Q+R G AP ALG + + EL+     PWY++  + A+A+A    A  +  G+E+ G+ A  AL RD+RRK   DP+ +L 
Sbjct:    1 MSGRLIILPKKSWHVWRRDNLERVKRDERLAAEAQEEADEKAQRADQEIRVETLKRKREQQHQQPSAKVGDGRGRKSQKSTA-RKGGDAG---------GGVDQGWGTGAQHVNLFPEPEARS----GGNVEHLREKEQQELLRQRREGAAPVALGGDAAGELQ---LAPWYSKPASAAAAQASTAAATVVVRGRELEGEAAKRALGRDDRRKALLDPMAALI 206
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BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A0B2V8L9_TOXCA (Leukocyte receptor cluster member 1-like protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2V8L9_TOXCA)

HSP 1 Score: 65.5 bits (158), Expect = 6.160e-8
Identity = 62/181 (34.25%), Postives = 94/181 (51.93%), Query Frame = 1 
Query:   19 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSK---KRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQ-NEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTKASARAENVVART 549
            ILPKK WH   +EN+ +V RD++LAAEE    R+RA+   Q+  V  L K   +R ++  +C + R     EE  S        G+G +  +G +G        HVNLF+E E E  K LG  N++Y+ EK+++    + + G+    LGEGS +      + WY Q   S RA ++  +T
Sbjct:    3 ILPKKKWHVRTKENVARVRRDQKLAAEEEQRIRERAQLAEQQFKVNLLRKHADERMLT--LCGTKR-----EEVES--------GEGSVQLEGCSG--------HVNLFAELEEEDRKNLGTGNKEYEEEKRKEREEYESKIGILKY-LGEGSNDF--TKQKSWYEQVP-SKRAGDICKKT 156
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BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A2R5LJQ0_9ACAR (Putative leukocyte receptor cluster member 1 (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LJQ0_9ACAR)

HSP 1 Score: 62.8 bits (151), Expect = 4.390e-7
Identity = 54/164 (32.93%), Postives = 80/164 (48.78%), Query Frame = 1 
Query:   19 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQT 510
            ILPKKSWH   + NIE+V RDE LAAEE  E + R +    E  +  L ++  + S          AK E  S++     K K                  HVN F + E       G+N D++ EK+E++   +++ GL  T LG+GS+E  G +S  WY+++
Sbjct:    4 ILPKKSWHVRTKRNIERVRRDEALAAEEEKEQQRRVQLAESEARINLLREQAKLRSGGQGHSAVDGAKRESLSQEDEDERKQK-----------------EHVNFFDDVESAQRSLHGKNADHEREKKEEQETYEKKIGLL-TYLGQGSSEASGSSS--WYSES 147
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BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: UPI0014258B8D (leukocyte receptor cluster member 1 homolog n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258B8D)

HSP 1 Score: 62.0 bits (149), Expect = 1.370e-6
Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 1 
Query:   19 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTK 513
            ILPKKSWH  K+ENIE+V RDE  AAEE  + + R     QE     L +K   + +     +G++  +                ID Q            H+N F + + E +K  G N D+++EKQ +++  +++ GL  T LG+ SAE + V  +PWY ++K
Sbjct:    3 ILPKKSWHVLKKENIERVRRDEAKAAEEEKQKQARIALAEQEARTARLRQKARKNYNEAVKQQGQQGDDLALV-----------AIDDQ---------PKGHINFFKDIQ-EGKKIGGVNADHEAEKQAEKINYEKKIGLL-TYLGQSSAEAQTV--KPWYQESK 143
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BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A293M4V0_ORNER (Cir_N domain-containing protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M4V0_ORNER)

HSP 1 Score: 59.7 bits (143), Expect = 4.560e-6
Identity = 57/164 (34.76%), Postives = 81/164 (49.39%), Query Frame = 1 
Query:   19 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQT 510
            ILPKKSWH   + NIE+V RDE LAAEE  E + R +    E  +  L ++  + +S        R     A  K+ S       +  Q    Q   D   HVN FSE E        +N D++ EK+E++   +++ GL  T LG+GS E  G +S  WY+Q+
Sbjct:    3 ILPKKSWHVRTKRNIERVRRDEALAAEEEKEQQRRIQLAESEARINLLREQAKLRAS--------RHHSVVADVKQPS-------LSNQDADEQKQRD---HVNFFSEVEGAQRSLHSKNADHEREKKEEQDEYEKKIGLL-TYLGQGSTEASGSSS--WYSQS 145
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BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A4D9D443_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D443_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 7.670e-6
Identity = 62/194 (31.96%), Postives = 96/194 (49.48%), Query Frame = 1 
Query:    4 SGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETL-SKKR-----------YISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDG------QGGTGQGWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTKASARAE 531
            SGRLIILPKK+WH   ++N E+VLRDERL  EE A+  ++ R+V ++  +E L ++KR           +  ++  +   G           RG   +G  CI        +G   QG      HV+LF +      KQ G N+DY  E+  QELR ++  G+AP     G  ++K   ++ WY Q + + + +
Sbjct:   22 SGRLIILPKKTWHVWNQDNRERVLRDERLHREEEAKQAEKQRDVARQDRLEMLRARKRQRDEGEDADVSHFEATSASEMGGGGVGALALGASRGLDNEGL-CIPAAKSGYVEGANHQG------HVHLFGQVAEHLAKQAG-NKDYVRERAAQELRKKRAEGVAPW----GFDDVK--PARQWYEQGEPAGQGQ 201
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BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A6B2LFR7_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LFR7_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 3.100e-5
Identity = 57/200 (28.50%), Postives = 95/200 (47.50%), Query Frame = 1 
Query:   19 ILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGIVETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQGWGDTPHHVNLFSEAEREAEKQLGQ-------NEDYQSEKQEQELRAQQRSGLAPTALGEGSAELKGVNSQPWYTQTKASARAENVVARTIRLGKEVTGKEALEAL 597
            +LP KSWH  K++NI+K+ RDE+   +E A+ + R+ ++  E   E LSKKR IS+            +EP +    +                   D   ++N F EA  EAEKQ  +       N DY  EK+E+E   Q+      + LG+GS E   + ++PW+   K S+     ++   ++ K+   ++ L+A+
Sbjct:    3 LLPHKSWHVWKKDNIQKIDRDEKKYQQELAQLKKRSLDIESERRYERLSKKRKIST------------KEPLNATHQTD------------------DGERNINFF-EALEEAEKQQKRDPRKALPNPDYLKEKEEKE---QKMIHSTTSYLGQGSIER--MKNKPWWWDDKNSSATAEPLSSISKIEKQKRSEDPLQAI 166
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BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Match: A0A7S3XLM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLM5_HETAK)

HSP 1 Score: 53.5 bits (127), Expect = 5.210e-5
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQE 144
            MSGRLIIL  KSWH   ++NIEKV +DERLAAEE  + +++ R V+QE
Sbjct:    1 MSGRLIILRHKSWHVWNQDNIEKVKKDERLAAEEEEKNKEKQRLVDQE 48
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51769.12449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LPN2_ECTSI1.480e-10059.39Cir_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CIP7_9STRA1.140e-3043.50Cir_N domain-containing protein n=1 Tax=Tribonema ... [more]
A0A0B2V8L9_TOXCA6.160e-834.25Leukocyte receptor cluster member 1-like protein n... [more]
A0A2R5LJQ0_9ACAR4.390e-732.93Putative leukocyte receptor cluster member 1 (Frag... [more]
UPI0014258B8D1.370e-632.73leukocyte receptor cluster member 1 homolog n=1 Ta... [more]
A0A293M4V0_ORNER4.560e-634.76Cir_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A4D9D443_9STRA7.670e-631.96Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6B2LFR7_9EUKA3.100e-528.50Uncharacterized protein (Fragment) n=1 Tax=Arcella... [more]
A0A7S3XLM5_HETAK5.210e-560.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51769contigH-elongata_contig51769:937..3329 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score65.9
Seed ortholog evalue4.7e-08
Seed eggNOG ortholog126957.SMAR000859-PA
EggNOG free text desc.N-terminal domain of CBF1 interacting co-repressor CIR
EggNOG OGs2CXRJ@1,2RZ97@2759,39ZMV@33154,3BN2A@33208,3D2RI@33213,41YPG@6656
COG Functional cat.S
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCBF1-interacting co-repressor CIR, N-terminal domain
Ec32 orthologEc-18_001840.1
Exons5
Model size1834
Cds size1116
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51769.12449.1prot_H-elongata_contig51769.12449.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51769 937..2557 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930846.4851332-CDS-H-elongata_contig51769:936..11441622930846.4851332-CDS-H-elongata_contig51769:936..1144Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51769 937..1144 +
1691679595.5560265-CDS-H-elongata_contig51769:936..11441691679595.5560265-CDS-H-elongata_contig51769:936..1144Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51769 937..1144 +
1622930846.4985242-CDS-H-elongata_contig51769:1402..21421622930846.4985242-CDS-H-elongata_contig51769:1402..2142Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51769 1403..2142 +
1691679595.5667229-CDS-H-elongata_contig51769:1402..21421691679595.5667229-CDS-H-elongata_contig51769:1402..2142Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51769 1403..2142 +
1622930846.5124295-CDS-H-elongata_contig51769:2389..25571622930846.5124295-CDS-H-elongata_contig51769:2389..2557Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51769 2390..2557 +
1691679595.5746102-CDS-H-elongata_contig51769:2389..25571691679595.5746102-CDS-H-elongata_contig51769:2389..2557Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51769 2390..2557 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930846.526203-UTR-H-elongata_contig51769:2557..27981622930846.526203-UTR-H-elongata_contig51769:2557..2798Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51769 2558..2798 +
1691679595.58208-UTR-H-elongata_contig51769:2557..27981691679595.58208-UTR-H-elongata_contig51769:2557..2798Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51769 2558..2798 +
1622930846.5381942-UTR-H-elongata_contig51769:2812..30461622930846.5381942-UTR-H-elongata_contig51769:2812..3046Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51769 2813..3046 +
1691679595.5898695-UTR-H-elongata_contig51769:2812..30461691679595.5898695-UTR-H-elongata_contig51769:2812..3046Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51769 2813..3046 +
1622930846.556002-UTR-H-elongata_contig51769:3086..33291622930846.556002-UTR-H-elongata_contig51769:3086..3329Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51769 3087..3329 +
1691679595.6039283-UTR-H-elongata_contig51769:3086..33291691679595.6039283-UTR-H-elongata_contig51769:3086..3329Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51769 3087..3329 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51769.12449.1

>prot_H-elongata_contig51769.12449.1 ID=prot_H-elongata_contig51769.12449.1|Name=mRNA_H-elongata_contig51769.12449.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=372bp
MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAEARDRAREVNQEGI
VETLSKKRYISSSICASPRGRRAKEEPASRKRGSPGKGKGCIDGQGGTGQ
GWGDTPHHVNLFSEAEREAEKQLGQNEDYQSEKQEQELRAQQRSGLAPTA
LGEGSAELKGVNSQPWYTQTKASARAENVVARTIRLGKEVTGKEALEALK
RDERRKGQADPLVSLFLSGSSPPPSINGPSTEDRAKRSVASDDTASADPR
GSDWASKQGGRKKSSKKVKKHKHKKHKKHKSVRDRDVNRGDSDTDAGHSL
GDDEGSAKDITRQQQLEELRQRRLAREGGERERQIRLLAERQMAGLSFPD
ERRMSYNNQYNATVARQNRLR*
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mRNA from alignment at H-elongata_contig51769:937..3329+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51769.12449.1 ID=mRNA_H-elongata_contig51769.12449.1|Name=mRNA_H-elongata_contig51769.12449.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2393bp|location=Sequence derived from alignment at H-elongata_contig51769:937..3329+ (Himanthalia elongata Himel1 dioecious)
ATGAGTGGGCGATTGATTATCTTGCCCAAGAAAAGCTGGCATCCCGGCAA
GCGAGAGAACATCGAAAAGGTCCTGAGGGATGAAAGACTCGCTGCCGAGG
AAGCAGCCGAGGCACGTGATCGCGCTCGCGAGGTCAACCAGGAAGGCATC
GTAGAGACGCTATCCAAAAAGAGGTACATCAGTAGCTCTATATGTGCATC
ACCTAGGGGTAAAGAATCGCTTGGTAACGCAGTCGAACTCGGGCGAATGC
AGTGTGCAATCTAAACGTGGCTCCTCGAGGTCAAGCATATTTACGTACGT
TTATAAAATAGGGCAGTTTGTTTCTCGAACTCGTATACGTCCATATCTTT
TAAAATAAAAACATTCAACGACTCAATCGGTCATTGTGCGCCAGATACTA
ATTAGGCACCCGTTTGCAAGCTTCTTATTAGCGTCTTCGATGGACTGGAA
ATCAGATCGTTGGAAGGGCGAAGAGCCAAAGAGGAGCCAGCGAGTCGAAA
GCGTGGGAGCCCGGGCAAAGGGAAAGGGTGCATCGACGGTCAGGGCGGGA
CGGGTCAAGGGTGGGGAGACACGCCCCATCACGTCAATCTCTTCAGTGAA
GCTGAGCGCGAAGCAGAGAAACAGCTGGGACAAAACGAAGACTATCAAAG
CGAAAAACAAGAGCAGGAACTGCGAGCGCAGCAGCGGTCGGGCCTGGCAC
CCACTGCTCTAGGAGAAGGCTCTGCCGAGTTGAAGGGTGTGAATTCGCAA
CCCTGGTACACGCAAACGAAAGCTTCAGCGAGGGCAGAAAACGTTGTGGC
GCGCACGATCCGGCTGGGAAAAGAGGTGACAGGAAAAGAAGCACTGGAAG
CCTTGAAGCGAGATGAAAGACGCAAAGGCCAAGCGGATCCGCTGGTCTCC
TTGTTCCTGTCCGGCTCGTCCCCGCCCCCCTCGATAAACGGACCATCCAC
AGAGGATCGCGCTAAACGATCGGTTGCGTCTGACGATACCGCGTCGGCCG
ATCCTCGAGGGTCGGATTGGGCGTCGAAACAAGGCGGTCGAAAAAAGTCG
TCCAAGAAAGTAAAAAAACATAAGCACAAAAAGCACAAGAAGCACAAGAG
CGTCCGCGATAGGGACGTAAATCGGGGCGATAGCGACACCGACGCCGGCC
ATTCCCTGGGCGATGACGAGGGCAGCGCTAAGGACATTACCCGGCAACAA
CAACTGGTAAGCCTTGCCCTCCTCCTCACCCTAGCTGACTTGAGATCGAC
TGCGAACATGTTCGGCCAGATAAAAAGTGTTGCGAAAAATCTTTCTCTCC
ACATGAAGTGATCATAGCGATCCTCTTGTGAGACTTTGGCGAGTACAGCG
ATCCTCGTAGTCCGTCGACAACCCACAAGCATCTGTGTCGTCTCTTGTGA
ATCATGCTTTCCTGGCCTTTGGATGTTGTTTTGGGGTCACTTCCTTGCAT
CAGGAGGAACTTCGTCAACGGCGACTCGCACGCGAAGGCGGCGAACGCGA
GCGACAGATACGACTTTTGGCTGAACGACAAATGGCCGGATTGTCTTTTC
CGGACGAGCGCCGCATGTCGTACAACAACCAGTACAACGCCACGGTCGCC
AGGCAAAATAGATTGCGCTGAGGGTTCGAGTTGTCGCTCTCTGTGCGAAG
CGATGGTGCTGTGATCGTATGTTGGCAAGCCACGTTGTCGACGGAGGAAA
TTTTTCGCTCGTGTATATTCTTGCTTCATAGGTTTCGTTGCCCATTGTGG
GCCTCCGTACGGTTGGGTTATGGATAGAGAAGACAATCCAGTTTGGCGCC
GATGTCCCAGTCACGATCGCGTATTCGATTAGCGTAAAATCACGTTTTCG
TGTTCGATGTATCGACCACTCGTCAACAATTAAGTTAAGTAAAAGGTTGC
TGAGGAATCGAAACAAAGACTTGCCCATCTAGAAGATGAGTCGCATTGAA
CTCTCGATCTTTCGGCGGACGTGACGATTACTTTTTGGACGATCAAAGCG
AGCGTTCGTTTCGCGACAAGCTGATGCACAGAGCCAAGGCTCTCGCTTTC
TGCACGACATTGCCTTTTCGTAAAGTTCGGTATCTTTCTGGTGGCGCGGG
GGAACTCAGAGTCCGGGCAGCTAACGACATAATCGTGAAAAGTGTACCAG
GTACGTAACAACACAGTTGCAGCGAAATATGATGACGTGGTGACGATCGT
TATTCCATATTATACTCACGCCCCAAATTGTCACTCAGATTGAAGTCGGT
ACGCCACCAGTTCTACGCGTTCAGTATTTGCCATTGGCATTGACCCCTAT
ACATTATGTGTCTATGTGTGTTGTCATCCCATTTATTTTAGACATCATAC
TTGTGGACGCATGATTGATCCACCTTCCTTCTGCGGTGCTTGC
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Coding sequence (CDS) from alignment at H-elongata_contig51769:937..3329+

>mRNA_H-elongata_contig51769.12449.1 ID=mRNA_H-elongata_contig51769.12449.1|Name=mRNA_H-elongata_contig51769.12449.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2232bp|location=Sequence derived from alignment at H-elongata_contig51769:937..3329+ (Himanthalia elongata Himel1 dioecious)
ATGAGTGGGCGATTGATTATCTTGCCCAAGAAAAGCTGGCATCCCGGCAA
GCGAGAGAACATCGAAAAGGTCCTGAGGGATGAAAGACTCGCTGCCGAGG
AAGCAGCCGAGGCACGTGATCGCGCTCGCGAGGTCAACCAGGAAGGCATC
GTAGAGACGCTATCCAAAAAGAGGTACATCAGTAGCTCTATATGTGCATC
ACCTAGGGATGAGTGGGCGATTGATTATCTTGCCCAAGAAAAGCTGGCAT
CCCGGCAAGCGAGAGAACATCGAAAAGGTCCTGAGGGATGAAAGACTCGC
TGCCGAGGAAGCAGCCGAGGCACGTGATCGCGCTCGCGAGGTCAACCAGG
AAGGCATCGTAGAGACGCTATCCAAAAAGAGGTACATCAGTAGCTCTATA
TGTGCATCACCTAGGGGGCGAAGAGCCAAAGAGGAGCCAGCGAGTCGAAA
GCGTGGGAGCCCGGGCAAAGGGAAAGGGTGCATCGACGGTCAGGGCGGGA
CGGGTCAAGGGTGGGGAGACACGCCCCATCACGTCAATCTCTTCAGTGAA
GCTGAGCGCGAAGCAGAGAAACAGCTGGGACAAAACGAAGACTATCAAAG
CGAAAAACAAGAGCAGGAACTGCGAGCGCAGCAGCGGTCGGGCCTGGCAC
CCACTGCTCTAGGAGAAGGCTCTGCCGAGTTGAAGGGTGTGAATTCGCAA
CCCTGGTACACGCAAACGAAAGCTTCAGCGAGGGCAGAAAACGTTGTGGC
GCGCACGATCCGGCTGGGAAAAGAGGTGACAGGAAAAGAAGCACTGGAAG
CCTTGAAGCGAGATGAAAGACGCAAAGGCCAAGCGGATCCGCTGGTCTCC
TTGTTCCTGTCCGGCTCGTCCCCGCCCCCCTCGATAAACGGACCATCCAC
AGAGGATCGCGCTAAACGATCGGTTGCGTCTGACGATACCGCGTCGGCCG
ATCCTCGAGGGTCGGATTGGGCGTCGAAACAAGGCGGTCGAAAAAAGTCG
TCCAAGAAAGTAAAAAAACATAAGCACAAAAAGCACAAGAAGCACAAGAG
CGTCCGCGATAGGGACGTAAATCGGGGCGATAGCGACACCGACGCCGGCC
ATTCCCTGGGCGATGACGAGGGCAGCGCTAAGGACATTACCCGGCAACAA
CAACTGGGCGAAGAGCCAAAGAGGAGCCAGCGAGTCGAAAGCGTGGGAGC
CCGGGCAAAGGGAAAGGGTGCATCGACGGTCAGGGCGGGACGGGTCAAGG
GTGGGGAGACACGCCCCATCACGTCAATCTCTTCAGTGAAGCTGAGCGCG
AAGCAGAGAAACAGCTGGGACAAAACGAAGACTATCAAAGCGAAAAACAA
GAGCAGGAACTGCGAGCGCAGCAGCGGTCGGGCCTGGCACCCACTGCTCT
AGGAGAAGGCTCTGCCGAGTTGAAGGGTGTGAATTCGCAACCCTGGTACA
CGCAAACGAAAGCTTCAGCGAGGGCAGAAAACGTTGTGGCGCGCACGATC
CGGCTGGGAAAAGAGGTGACAGGAAAAGAAGCACTGGAAGCCTTGAAGCG
AGATGAAAGACGCAAAGGCCAAGCGGATCCGCTGGTCTCCTTGTTCCTGT
CCGGCTCGTCCCCGCCCCCCTCGATAAACGGACCATCCACAGAGGATCGC
GCTAAACGATCGGTTGCGTCTGACGATACCGCGTCGGCCGATCCTCGAGG
GTCGGATTGGGCGTCGAAACAAGGCGGTCGAAAAAAGTCGTCCAAGAAAG
TAAAAAAACATAAGCACAAAAAGCACAAGAAGCACAAGAGCGTCCGCGAT
AGGGACGTAAATCGGGGCGATAGCGACACCGACGCCGGCCATTCCCTGGG
CGATGACGAGGGCAGCGCTAAGGACATTACCCGGCAACAACAACTGGAGG
AACTTCGTCAACGGCGACTCGCACGCGAAGGCGGCGAACGCGAGCGACAG
ATACGACTTTTGGCTGAACGACAAATGGCCGGATTGTCTTTTCCGGACGA
GCGCCGCATGTCGTACAACAACCAGTACAACGCCACGGTCGCCAGGCAAA
ATAGATTGCGCTGAGAGGAACTTCGTCAACGGCGACTCGCACGCGAAGGC
GGCGAACGCGAGCGACAGATACGACTTTTGGCTGAACGACAAATGGCCGG
ATTGTCTTTTCCGGACGAGCGCCGCATGTCGTACAACAACCAGTACAACG
CCACGGTCGCCAGGCAAAATAGATTGCGCTGA
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