prot_H-elongata_contig51646.12438.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51646.12438.1
Unique Nameprot_H-elongata_contig51646.12438.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 3.410e-45
Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSGHRK 82
            +LPK  AK++P SRLLTEDEWR LGVQQSRGWQHYAVH PEPHILLFRRPLGTNPVTG+VDPELEREAKEKYA ELS G RK
Sbjct:   21 ILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102          
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA)

HSP 1 Score: 130 bits (328), Expect = 7.550e-38
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSG 79
            +LPK +A+ +P  RLLTE EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGT+PVTGKV+ ELEREAKEKYA  ++  
Sbjct:   22 ILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMNGA 100          
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.510e-36
Identity = 58/82 (70.73%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSGHRK 82
            +LPK +AK +P +RLL E EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGT+PVTGKVD ELER+AK+ Y   L+   RK
Sbjct:   41 ILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLAVNQRK 122          
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 4.550e-36
Identity = 56/77 (72.73%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELS 77
            +LPK++AK +P SR+LTE EWR LGVQQSRGW HYA+HRPEPHILLF+RPLGT+PV+GKVDP LE+EAK+ Y  EL+
Sbjct:   22 ILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELA 98          
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.090e-36
Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSGHR 81
            +LPK+ A+ +P +R LTE EWR++GVQQSRGW+HYA H+PEPHILLFRRPLGT+PV+G+VDPELEREA+EKY  EL+   R
Sbjct:   23 ILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELAVNQR 103          
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S2VEK7_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VEK7_9STRA)

HSP 1 Score: 126 bits (316), Expect = 8.210e-36
Identity = 54/72 (75.00%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 72
            +LPK +AK +P SRLLTE EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGT+P +G+VDPELER A+++Y
Sbjct:   40 ILPKELAKTLPKSRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELERAARDEY 111          
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.460e-35
Identity = 53/72 (73.61%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 72
            +LPK++AK +P +RLL+E EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGT+P +G+VDPELEREA+E+Y
Sbjct:   24 ILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEY 95          
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.520e-35
Identity = 57/81 (70.37%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYA--LELSSG 79
            +LPK +AK +P +RLL+E EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGT+PVTGK+DP LEREAK+ Y   LEL+  
Sbjct:   40 ILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLELNQA 120          
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A1Z5K5B7_FISSO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5B7_FISSO)

HSP 1 Score: 124 bits (312), Expect = 2.010e-35
Identity = 54/72 (75.00%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 72
            +LPK +AK +P SRLLTE EWRS+GVQQSRGWQHYA+HRPEPHILLFRRPLGT+P +G+VDPEL + A+E+Y
Sbjct:   24 ILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELLKAAREEY 95          
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S3P5A6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5A6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.670e-35
Identity = 53/72 (73.61%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 72
            +LPK +AK +P SRLLTE EWRS+GVQQSRGWQHYA+HRPEPHILLFRRPLGT+P +G++DPEL R A+++Y
Sbjct:   55 ILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRIDPELARAARDEY 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2I6_9PHAE3.410e-4585.37Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
W7T145_9STRA7.550e-3873.42Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S2BWV6_9STRA1.510e-3670.73Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
D7G7T5_ECTSI4.550e-3672.73Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S3MEH0_9STRA5.090e-3669.14Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A7S2VEK7_9STRA8.210e-3675.00Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A6S9ANL1_9STRA1.460e-3573.61Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S2BBH9_9STRA1.520e-3570.37Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A1Z5K5B7_FISSO2.010e-3575.00Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A7S3P5A6_9STRA3.670e-3573.61Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000789Cyclin-dependent kinase, regulatory subunitPRINTSPR00296CYCLINKINASEcoord: 20..34
score: 77.44
coord: 35..49
score: 78.97
IPR000789Cyclin-dependent kinase, regulatory subunitSMARTSM01084CKS_2coord: 1..52
e-value: 1.4E-25
score: 101.0
IPR000789Cyclin-dependent kinase, regulatory subunitPFAMPF01111CKScoord: 1..50
e-value: 9.0E-24
score: 83.5
IPR000789Cyclin-dependent kinase, regulatory subunitPROSITEPS00945CKS_2coord: 38..48
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilyGENE3D3.30.170.10coord: 1..64
e-value: 1.3E-25
score: 91.3
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilySUPERFAMILY55637Cell cycle regulatory proteinscoord: 1..54
NoneNo IPR availablePANTHERPTHR23415:SF30CYCLIN-DEPENDENT KINASES REGULATORY SUBUNITcoord: 1..52
NoneNo IPR availablePANTHERPTHR23415CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7coord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51646contigH-elongata_contig51646:3401..3870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51646.12438.1mRNA_H-elongata_contig51646.12438.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51646 3401..3897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51646.12438.1 ID=prot_H-elongata_contig51646.12438.1|Name=mRNA_H-elongata_contig51646.12438.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRP
LGTNPVTGKVDPELEREAKEKYALELSSGHRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000789Cyclin-dep_kinase_reg-sub
IPR036858Cyclin-dep_kinase_reg-sub_sf