mRNA_H-elongata_contig51548.12421.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: D7G9I1_ECTSI (Cyclopropane-fatty-acyl-phospholipid synthase/ oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I1_ECTSI) HSP 1 Score: 159 bits (401), Expect = 2.510e-43 Identity = 77/85 (90.59%), Postives = 79/85 (92.94%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGH+YLG FFASTDALLAPGG+MVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALL AMA SS SLE LDNMCVH
Sbjct: 911 IEAVGHNYLGTFFASTDALLAPGGVMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLSAMASSSSFSLEGLDNMCVH 995
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: A0A6H5K6Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Z7_9PHAE) HSP 1 Score: 157 bits (396), Expect = 4.180e-43 Identity = 76/85 (89.41%), Postives = 78/85 (91.76%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGH+YLG FFAS DALLAPGG+MVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALL AMA SS SLE LDNMCVH
Sbjct: 496 IEAVGHNYLGTFFASADALLAPGGVMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLSAMASSSSFSLEGLDNMCVH 580
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: A0A835ZDJ8_9STRA (Mycolic acid cyclopropane synthetase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ8_9STRA) HSP 1 Score: 134 bits (338), Expect = 7.210e-35 Identity = 63/85 (74.12%), Postives = 75/85 (88.24%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGH+YL +FA+ +ALLAPGG+ VM+AITTPE+RY+EY+RSTDFINTIIFPGSCCPSLTAL+ AMA HS LSLE +N+ VH
Sbjct: 567 IEAVGHNYLPSYFAAVEALLAPGGVFVMEAITTPESRYKEYLRSTDFINTIIFPGSCCPSLTALMDAMASHSRLSLEGYENIGVH 651
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: A0A7S2XUH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUH5_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.840e-34 Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGH+YLG+F+ + ++LL P GI+VM+AITTPE+RY EY+RSTDFINTIIFPGSCCPSLTALL A +K+SSL+LE +DN+C+H
Sbjct: 582 IEAVGHNYLGQFYRAMESLLKPDGILVMEAITTPESRYVEYLRSTDFINTIIFPGSCCPSLTALLDAASKNSSLTLEGVDNICLH 666
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: A0A7S4DDE0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDE0_HETAK) HSP 1 Score: 129 bits (324), Expect = 1.070e-33 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGH+YLG FFA+ + LL P G+ VM+AITTPE+RY+EY+RSTDFINTI FPGSCCPSLTALL AMA++S +SLE DN+ +H
Sbjct: 281 IEAVGHNYLGSFFAAVERLLKPDGVFVMEAITTPESRYQEYLRSTDFINTIAFPGSCCPSLTALLEAMARNSEMSLEGYDNIGLH 365
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: A0A4D9CY91_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY91_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.380e-31 Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGHS+LG +F + +LL P G+ VM+AITTPE+RY +Y++STDFINTI+FPGSCCPSLT+LL AMA+HS+LSLE L N+ VH
Sbjct: 819 IEAVGHSHLGEYFHAVGSLLKPSGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTSLLEAMARHSALSLEGLINIDVH 903
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: A0A7S2REM9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REM9_9STRA) HSP 1 Score: 120 bits (301), Expect = 7.810e-30 Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGH+YLG FF++ D LL PGGI VM+AITTPE RY+E + DFINT+IFPGSCCPSL ALL AMA S+ SLE LDN+ +H
Sbjct: 801 IEAVGHNYLGAFFSAVDRLLKPGGIFVMEAITTPECRYDEVRTAADFINTVIFPGSCCPSLQALLTAMAAKSNFSLERLDNINLH 885
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: A0A7S4SWZ7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SWZ7_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.100e-29 Identity = 56/85 (65.88%), Postives = 69/85 (81.18%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGH +LG FF + + +LAP GI+VM+AITTPE RYE Y+RSTDFINTIIFPG CCPSL AL+ A K S+L+LE +DN+ +H
Sbjct: 283 IEAVGHEHLGEFFWAVEQVLAPDGILVMEAITTPEARYETYLRSTDFINTIIFPGGCCPSLHALIDASYKQSTLTLEHIDNIGLH 367
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: A0A7S2PQB7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQB7_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.020e-29 Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGH +LG FF + + +LA GI+VM+AITTPE RYE Y RSTDFINTIIFPGSCCPSL AL+ A K SSL+LE +DN+ +H
Sbjct: 158 IEAVGHEHLGEFFWAVEQVLAYDGILVMEAITTPETRYETYRRSTDFINTIIFPGSCCPSLHALVDASYKQSSLTLEHIDNIGLH 242
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Match: A0A1Z5K125_FISSO (Cyclopropane-fatty-acyl-phospholipid synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K125_FISSO) HSP 1 Score: 115 bits (288), Expect = 4.450e-28 Identity = 55/85 (64.71%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 4 IEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLCAMAKHSSLSLESLDNMCVH 258
IEAVGH +LG FF + + +LA GI+VM+AITTPE RYE Y+RSTDFINTIIFPGSCCPSL AL+ A + S L+LE +DN+ +H
Sbjct: 826 IEAVGHEHLGEFFWAVEQVLAKDGILVMEAITTPEQRYETYLRSTDFINTIIFPGSCCPSLHALVDAAYRQSCLTLEHIDNIGLH 910 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51548.12421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51548.12421.1 >prot_H-elongata_contig51548.12421.1 ID=prot_H-elongata_contig51548.12421.1|Name=mRNA_H-elongata_contig51548.12421.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp QIEAVGHSYLGRFFASTDALLAPGGIMVMQAITTPENRYEEYIRSTDFINback to top mRNA from alignment at H-elongata_contig51548:444..1611- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51548.12421.1 ID=mRNA_H-elongata_contig51548.12421.1|Name=mRNA_H-elongata_contig51548.12421.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1168bp|location=Sequence derived from alignment at H-elongata_contig51548:444..1611- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51548:444..1611- >mRNA_H-elongata_contig51548.12421.1 ID=mRNA_H-elongata_contig51548.12421.1|Name=mRNA_H-elongata_contig51548.12421.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=516bp|location=Sequence derived from alignment at H-elongata_contig51548:444..1611- (Himanthalia elongata Himel1 dioecious)back to top |