prot_H-elongata_contig51088.12370.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: D7FNB2_ECTSI (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB2_ECTSI) HSP 1 Score: 125 bits (314), Expect = 1.030e-31 Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 0
Query: 1 RLLNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVLTDVD 79
R + RYYLP LFS GGK LTLA+AA LA LG G+ GL+MGLEPQLAAPTDFYLQDYY+AQ S+GEAGPPAYVV +D+D
Sbjct: 940 RFIERYYLPALFSRGGKALTLAVAAALAFLGCLGMHGLQMGLEPQLAAPTDFYLQDYYDAQFSMGEAGPPAYVVFSDLD 1018
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: K8YSC8_NANGC (Niemann-Pick C1 protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSC8_NANGC) HSP 1 Score: 88.2 bits (217), Expect = 1.300e-18 Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 0
Query: 1 RLLNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVLTDVD 79
R +++ YLP L S GK + L +LG++G++ L +GLEPQLAAP+DFYL DYY + +LGEAGPP Y+VL D+D
Sbjct: 223 RCMDKGYLPCLMSRAGKTAVGGLGLLLLILGLWGITTLELGLEPQLAAPSDFYLVDYYNTEFTLGEAGPPLYLVLKDLD 301
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: W7TJL6_9STRA (Patched family protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJL6_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.300e-18 Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 0
Query: 1 RLLNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVLTDVD 79
R +++ YLP L S GK + L +LG++G++ L +GLEPQLAAP+DFYL DYY + +LGEAGPP Y+VL D+D
Sbjct: 267 RCMDKGYLPCLMSRAGKTAVGGLGLLLLILGLWGITTLELGLEPQLAAPSDFYLVDYYNTEFTLGEAGPPLYLVLKDLD 345
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: A0A4D9CZ93_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ93_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 7.840e-18 Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 0
Query: 3 LNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVLTDVD 79
+++ YLP L S GK + + L +LG++G++ L +GLEPQLAAP+DFYL DYY + + GEAGPP Y+V+ D+D
Sbjct: 1 MDKGYLPCLMSRAGKIAVVVVGLLLLMLGLWGITTLELGLEPQLAAPSDFYLVDYYNTEFTRGEAGPPLYLVVKDLD 77
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: H3GZV5_PHYRM (SSD domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZV5_PHYRM) HSP 1 Score: 81.6 bits (200), Expect = 2.620e-16 Identity = 42/80 (52.50%), Postives = 52/80 (65.00%), Query Frame = 0
Query: 1 RLLNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVL-TDVD 79
R + + Y+P L K L L IA + L FG S L +GLE +LA PTDFYL +Y++ Q +LGEAGPPAYVVL DVD
Sbjct: 553 RFVEKTYIPFLLRRSTKVLVLVIALSVLTLSAFGSSELPLGLEQELAVPTDFYLHEYFKKQTALGEAGPPAYVVLDNDVD 632
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: A0A3R7XRB7_9STRA (SSD domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7XRB7_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 3.580e-16 Identity = 39/75 (52.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query: 1 RLLNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVL 75
R + + Y+P L K L L IA + +L FG S L +GLE +LA PTDFYL +Y++ Q +LGEAGPPAYVVL
Sbjct: 520 RFVEKTYIPFLLRRSTKVLVLVIAFAILILSAFGSSKLPLGLEQELAVPTDFYLHEYFKKQTALGEAGPPAYVVL 594
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: A0A6A3P324_9STRA (SSD domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P324_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.680e-16 Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 0
Query: 1 RLLNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVL-TDVD 79
R + + Y+P L K L L A + L FG S L +GLE +LA PTDFYL +Y++ Q +LGEAGPPAYVVL +DVD
Sbjct: 557 RFVEKTYIPFLLRRSTKVLVLVTALSIITLSAFGSSELPLGLEQELAVPTDFYLHEYFKKQTALGEAGPPAYVVLDSDVD 636
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: A0A835YXX1_9STRA (SSD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX1_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.710e-16 Identity = 40/73 (54.79%), Postives = 48/73 (65.75%), Query Frame = 0
Query: 3 LNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVL 75
+ R+YLP L S GGK +TL AA L G G + +GLEPQLAAP D LQ YY Q +LGEAGPPAY+ +
Sbjct: 801 MERWYLPALLSRGGKAVTLLAAAALVACGGVGARRMPLGLEPQLAAPLDSPLQAYYRDQFALGEAGPPAYIFV 873
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: D0NHB7_PHYIT (Resistance-Nodulation-Cell Division (RND) Superfamily n=14 Tax=Phytophthora TaxID=4783 RepID=D0NHB7_PHYIT) HSP 1 Score: 78.2 bits (191), Expect = 4.330e-15 Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 0
Query: 1 RLLNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVL-TDVD 79
R + R Y+P L K + L A L FG S L +GLE +LA PTDFYL +Y++ Q +LGEAGPPAYVVL +DVD
Sbjct: 523 RFVERTYIPFLLRRSTKVVVLVTAVLTLTLSAFGSSELPLGLEQELAVPTDFYLHEYFKKQTALGEAGPPAYVVLDSDVD 602
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Match: A0A421G8C8_9STRA (SSD domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G8C8_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 5.940e-15 Identity = 39/80 (48.75%), Postives = 50/80 (62.50%), Query Frame = 0
Query: 1 RLLNRYYLPVLFSNGGKFLTLAIAAGLAVLGVFGLSGLRMGLEPQLAAPTDFYLQDYYEAQISLGEAGPPAYVVL-TDVD 79
R + + Y+P L K + L A + + G S L +GLE QLA PTDFYL Y++ Q +LGEAGPPAYVVL +DVD
Sbjct: 691 RFMEKTYIPFLLQRSTKVVVLVTALSILTISALGSSHLPLGLEQQLAVPTDFYLHQYFQKQTALGEAGPPAYVVLDSDVD 770 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51088.12370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig51088.12370.1 ID=prot_H-elongata_contig51088.12370.1|Name=mRNA_H-elongata_contig51088.12370.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bpback to top |