mRNA_H-elongata_contig50516.12296.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 423 bits (1087), Expect = 2.630e-137 Identity = 221/298 (74.16%), Postives = 245/298 (82.21%), Query Frame = 3
Query: 3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQ--------LTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRVLDQLYDGCNVLKEK 872
RES +LGY GP L QLDLTTVANEEYITFSVSYIA+ T ITRVGLATRAFPGSH DIEPWIE+ LT E F DMMG V P+DVFLAFTVDQG NVVNAC+NL VEVLKCNAH LNSVTMWALG+NGS ++T ENP MEK MKRLAAVVGV+SHSAVNNDELK+IQ LQEEF +YEL+RRNDTRW +QHAMMVRLLKLK +IVEYFR ++ N RKLS+REW +TNEV SLLDVV EV VKIQG+TDTHISQTMFNM EI++IF D +KIRV DQ Y+ +VLKEK
Sbjct: 255 RESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGS-IRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEK 551
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 330 bits (845), Expect = 4.890e-105 Identity = 169/223 (75.78%), Postives = 190/223 (85.20%), Query Frame = 3
Query: 204 QLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRVLDQLYDGCNVLKEK 872
QLT E F DMMG V P+DVFLAFTVDQG NVVNAC+NL VEVLKCNAH LNSVTMWALG+NGS ++T ENP MEK MKRLAAVVGV+SHSAVNNDELK+IQ LQEEF +YEL+RRNDTRW +QHAMMVRLLKLK +IVEYFR ++ N RKLS+REW +TNEV SLLDVV EV VKIQG+TDTHISQTMFNM EI++IF D +KIRV DQ Y+ +VLKEK
Sbjct: 2 QLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGS-IRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEK 223
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 318 bits (815), Expect = 5.070e-97 Identity = 163/275 (59.27%), Postives = 197/275 (71.64%), Query Frame = 3
Query: 3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIR 827
RE +GY G L QLDLTTVA EEYITF+VSY+ +G T +TRV LA RAFPG+H DI PWIE+LT E F D MG V P+DVFLAFTVDQG NVVNACK LGV V+KCN H +N+ +WALG+ G+ + N M MK+LAA+VGV+SHSAVNND+LK +Q L+E+ VY+L+RRNDTRWT+Q MM RLL LK I EYFR N RKL+ EW ITNEV SLL V EV +++QG+ DTHISQ MF + E+ ++ ED H IR
Sbjct: 273 REECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGRR---NKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIR 544
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 312 bits (799), Expect = 1.820e-96 Identity = 157/275 (57.09%), Postives = 199/275 (72.36%), Query Frame = 3
Query: 3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIR 827
RE +GY GP L QLDLTT A EEYITF+V+++ +G+T +TR+ LA RAFPGSH DI+PWIE+LT E F MG +V P DVFLAFTVDQG N++NAC LGV V++CN H LN+ +WALG+ G K NP M MK+LAA+VGV+SHSAVNNDELK +Q L+E F ++YEL+R NDTRWT+Q MM R+L LK I EYF+++ N+RKL+ EW ITNEV SLL V EV +++QGS DTH+ Q MF + E+ ++ ED H IR
Sbjct: 80 REENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG---KGRLNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIR 351
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 315 bits (806), Expect = 1.340e-95 Identity = 158/275 (57.45%), Postives = 200/275 (72.73%), Query Frame = 3
Query: 3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIR 827
RE +GY GP L QLDLTT A EEYITF+V+++ +G+T +TR+ LA RAFPGSH DI+PWIE+LT E F MG +V P DVFLAFTVDQG N++NAC LGV V++CN H LN+ +WALG+ G K NP M MK+LAA+VGV+SHSAVNNDELK +Q L+E F ++YEL+RRNDTRWT+Q MM R+L LK I EYF+++ N+RKL+ EW ITNEV SLL V EV +++QGS DTH+ Q MF + E+ ++ ED H IR
Sbjct: 275 REENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG---KGRLNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIR 546
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 307 bits (787), Expect = 9.010e-95 Identity = 163/283 (57.60%), Postives = 202/283 (71.38%), Query Frame = 3
Query: 3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR-------HDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRV 830
RE +GY G L QLDLTTVA EEYITF+VSY+ +G+T ++RV LATRAFPGSH DI+PWIE LT E D+MG +V +DVFLAFTVDQG NVVNAC LGV V++CN H +NS +WALG+ GS V TC+N K MK+LAA+VGV+SHSAVNND LK +Q L+ + ++YE +RRNDTRWT+Q MM RLL LK I EYFRR + KRKL+ EW +TNEV SLL+ V EV +++QG+TDTH+SQ F + E+ D+ D H IRV
Sbjct: 84 REECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGS-VTTCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRV 361
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 298 bits (763), Expect = 3.580e-91 Identity = 163/309 (52.75%), Postives = 206/309 (66.67%), Query Frame = 3
Query: 3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR-------HDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMF--------NMLEIKDIFEEDGHKIRVLDQLYDGCNVLKEKQSSK 884
RE +GY G L QLDLTTVA EEYITF+VSY+ +G+T ++RV LATRAFPGSH DI+PWIE LT E F D+MG +V +DVFLAFTVDQG NVVNAC LGV V++CN H +NS +WALG+ GS+ TC+N K MK+LAA+VGV+SHSAVNND LK +Q L+ + ++YE +RRNDTRWT+Q MM RLL LK I EYFRR + KRKL+ EW +TNEV SLL+ V EV +++QG+T+TH+SQ F N + I E+ + + D VL+E K
Sbjct: 84 REECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSAT-TCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEGEGQNESSLDGISTEETQVTGLTLEAQDVVQVLREMMDEK 387
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 287 bits (735), Expect = 3.670e-88 Identity = 157/284 (55.28%), Postives = 194/284 (68.31%), Query Frame = 3
Query: 3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETV-ITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR-------HDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRV 830
RE +GY G L LDLTTVANEEYITF+VSY+ +G+T +TRV LATRAFPGSH DI+PWIE LT E F D++G +V P DVFL FTVDQG N+VNA LGV V++CN H +NS +WALG+ G + +TC+N M MK+LAA VGV+SHSAVNND LK IQ L+ + +VYE WT+Q MMVRLL L +I EYFRR H KRKL+ EW +TNEV SLLD V E +++QG+ DTHISQ F + E+ ++ +ED H IRV
Sbjct: 80 REEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCA-RTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRLEADLHRVYE--------WTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSHPIRV 354
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 209 bits (533), Expect = 1.540e-58 Identity = 118/219 (53.88%), Postives = 151/219 (68.95%), Query Frame = 3
Query: 204 QLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR------HDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRVLDQL 842
QLT E FG MG +V P DVFLAFTVDQG NVVNAC LGV+V+KCN H +NS +WALG+ GS+ TC N M MK+LAA+VGV+S SAVNN LK +Q L+ + ++YEL+RRNDT +Q MM RLL LK I EYFRR + KRKLS+ EW +TNEV SLL V E+ ++IQG+ DTHISQ MF + E+ ++ +++ H IR + +
Sbjct: 6 QLTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSAT-TCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAI 219
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 205 bits (522), Expect = 8.340e-58 Identity = 107/199 (53.77%), Postives = 141/199 (70.85%), Query Frame = 3
Query: 234 MGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRW-TTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIR 827
MG +V P + FLAFTVDQG N++NAC L V V++CN H +N+ +WALG+ + K +NP M MK+LAA+VGV+SHSAVNNDELK +Q L+E F ++YEL+RRNDTRW T+Q MM R L LK I E+F+++ N RKL+ EW I NEV SLL V E+ +++QGS DTHI Q MF + E+ ++ ED H IR
Sbjct: 1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGI---AAKGRKNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIR 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig50516.12296.1 >prot_H-elongata_contig50516.12296.1 ID=prot_H-elongata_contig50516.12296.1|Name=mRNA_H-elongata_contig50516.12296.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp MMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALback to top mRNA from alignment at H-elongata_contig50516:789..2570+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig50516.12296.1 ID=mRNA_H-elongata_contig50516.12296.1|Name=mRNA_H-elongata_contig50516.12296.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1782bp|location=Sequence derived from alignment at H-elongata_contig50516:789..2570+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig50516:789..2570+ >mRNA_H-elongata_contig50516.12296.1 ID=mRNA_H-elongata_contig50516.12296.1|Name=mRNA_H-elongata_contig50516.12296.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig50516:789..2570+ (Himanthalia elongata Himel1 dioecious)back to top |