mRNA_H-elongata_contig50516.12296.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50516.12296.1
Unique NamemRNA_H-elongata_contig50516.12296.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 2.630e-137
Identity = 221/298 (74.16%), Postives = 245/298 (82.21%), Query Frame = 3
Query:    3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQ--------LTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRVLDQLYDGCNVLKEK 872
            RES  +LGY GP L  QLDLTTVANEEYITFSVSYIA+  T ITRVGLATRAFPGSH   DIEPWIE+        LT E F DMMG  V P+DVFLAFTVDQG NVVNAC+NL VEVLKCNAH LNSVTMWALG+NGS ++T ENP MEK MKRLAAVVGV+SHSAVNNDELK+IQ LQEEF  +YEL+RRNDTRW +QHAMMVRLLKLK +IVEYFR ++ N RKLS+REW +TNEV SLLDVV EV VKIQG+TDTHISQTMFNM EI++IF  D +KIRV DQ Y+  +VLKEK
Sbjct:  255 RESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGS-IRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEK 551          
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 4.890e-105
Identity = 169/223 (75.78%), Postives = 190/223 (85.20%), Query Frame = 3
Query:  204 QLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRVLDQLYDGCNVLKEK 872
            QLT E F DMMG  V P+DVFLAFTVDQG NVVNAC+NL VEVLKCNAH LNSVTMWALG+NGS ++T ENP MEK MKRLAAVVGV+SHSAVNNDELK+IQ LQEEF  +YEL+RRNDTRW +QHAMMVRLLKLK +IVEYFR ++ N RKLS+REW +TNEV SLLDVV EV VKIQG+TDTHISQTMFNM EI++IF  D +KIRV DQ Y+  +VLKEK
Sbjct:    2 QLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGS-IRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEK 223          
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 5.070e-97
Identity = 163/275 (59.27%), Postives = 197/275 (71.64%), Query Frame = 3
Query:    3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIR 827
            RE    +GY G  L  QLDLTTVA EEYITF+VSY+ +G T +TRV LA RAFPG+H   DI PWIE+LT E F D MG  V P+DVFLAFTVDQG NVVNACK LGV V+KCN H +N+  +WALG+ G+  +   N  M   MK+LAA+VGV+SHSAVNND+LK +Q L+E+   VY+L+RRNDTRWT+Q  MM RLL LK  I EYFR    N RKL+  EW ITNEV SLL  V EV +++QG+ DTHISQ MF + E+ ++  ED H IR
Sbjct:  273 REECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGRR---NKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIR 544          
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 1.820e-96
Identity = 157/275 (57.09%), Postives = 199/275 (72.36%), Query Frame = 3
Query:    3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIR 827
            RE    +GY GP L  QLDLTT A EEYITF+V+++ +G+T +TR+ LA RAFPGSH   DI+PWIE+LT E F   MG +V P DVFLAFTVDQG N++NAC  LGV V++CN H LN+  +WALG+ G   K   NP M   MK+LAA+VGV+SHSAVNNDELK +Q L+E F ++YEL+R NDTRWT+Q  MM R+L LK  I EYF+++  N+RKL+  EW ITNEV SLL  V EV +++QGS DTH+ Q MF + E+ ++  ED H IR
Sbjct:   80 REENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG---KGRLNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIR 351          
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 1.340e-95
Identity = 158/275 (57.45%), Postives = 200/275 (72.73%), Query Frame = 3
Query:    3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIR 827
            RE    +GY GP L  QLDLTT A EEYITF+V+++ +G+T +TR+ LA RAFPGSH   DI+PWIE+LT E F   MG +V P DVFLAFTVDQG N++NAC  LGV V++CN H LN+  +WALG+ G   K   NP M   MK+LAA+VGV+SHSAVNNDELK +Q L+E F ++YEL+RRNDTRWT+Q  MM R+L LK  I EYF+++  N+RKL+  EW ITNEV SLL  V EV +++QGS DTH+ Q MF + E+ ++  ED H IR
Sbjct:  275 REENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG---KGRLNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIR 546          
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 9.010e-95
Identity = 163/283 (57.60%), Postives = 202/283 (71.38%), Query Frame = 3
Query:    3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR-------HDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRV 830
            RE    +GY G  L  QLDLTTVA EEYITF+VSY+ +G+T ++RV LATRAFPGSH   DI+PWIE LT E   D+MG +V  +DVFLAFTVDQG NVVNAC  LGV V++CN H +NS  +WALG+ GS V TC+N    K MK+LAA+VGV+SHSAVNND LK +Q L+ +  ++YE +RRNDTRWT+Q  MM RLL LK  I EYFRR       +   KRKL+  EW +TNEV SLL+ V EV +++QG+TDTH+SQ  F + E+ D+   D H IRV
Sbjct:   84 REECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGS-VTTCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRV 361          
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 3.580e-91
Identity = 163/309 (52.75%), Postives = 206/309 (66.67%), Query Frame = 3
Query:    3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETVITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR-------HDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMF--------NMLEIKDIFEEDGHKIRVLDQLYDGCNVLKEKQSSK 884
            RE    +GY G  L  QLDLTTVA EEYITF+VSY+ +G+T ++RV LATRAFPGSH   DI+PWIE LT E F D+MG +V  +DVFLAFTVDQG NVVNAC  LGV V++CN H +NS  +WALG+ GS+  TC+N    K MK+LAA+VGV+SHSAVNND LK +Q L+ +  ++YE +RRNDTRWT+Q  MM RLL LK  I EYFRR       +   KRKL+  EW +TNEV SLL+ V EV +++QG+T+TH+SQ  F        N   +  I  E+     +  +  D   VL+E    K
Sbjct:   84 REECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSAT-TCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEGEGQNESSLDGISTEETQVTGLTLEAQDVVQVLREMMDEK 387          
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 3.670e-88
Identity = 157/284 (55.28%), Postives = 194/284 (68.31%), Query Frame = 3
Query:    3 RESRRELGYKGPLLDTQLDLTTVANEEYITFSVSYIAQGETV-ITRVGLATRAFPGSHATGDIEPWIEQLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR-------HDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRV 830
            RE    +GY G  L   LDLTTVANEEYITF+VSY+ +G+T  +TRV LATRAFPGSH   DI+PWIE LT E F D++G +V P DVFL FTVDQG N+VNA   LGV V++CN H +NS  +WALG+ G + +TC+N  M   MK+LAA VGV+SHSAVNND LK IQ L+ +  +VYE        WT+Q  MMVRLL L  +I EYFRR       H   KRKL+  EW +TNEV SLLD V E  +++QG+ DTHISQ  F + E+ ++ +ED H IRV
Sbjct:   80 REEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCA-RTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRLEADLHRVYE--------WTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSHPIRV 354          
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 1.540e-58
Identity = 118/219 (53.88%), Postives = 151/219 (68.95%), Query Frame = 3
Query:  204 QLTPELFGDMMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRR------HDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIRVLDQL 842
            QLT E FG  MG +V P DVFLAFTVDQG NVVNAC  LGV+V+KCN H +NS  +WALG+ GS+  TC N  M   MK+LAA+VGV+S SAVNN  LK +Q L+ +  ++YEL+RRNDT   +Q  MM RLL LK  I EYFRR      +   KRKLS+ EW +TNEV SLL  V E+ ++IQG+ DTHISQ MF + E+ ++ +++ H IR  + +
Sbjct:    6 QLTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSAT-TCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAI 219          
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 8.340e-58
Identity = 107/199 (53.77%), Postives = 141/199 (70.85%), Query Frame = 3
Query:  234 MGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWALGVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFLQVYELVRRNDTRW-TTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWRITNEV*SLLDVVVEVAVKIQGSTDTHISQTMFNMLEIKDIFEEDGHKIR 827
            MG +V P + FLAFTVDQG N++NAC  L V V++CN H +N+  +WALG+   + K  +NP M   MK+LAA+VGV+SHSAVNNDELK +Q L+E F ++YEL+RRNDTRW T+Q  MM R L LK  I E+F+++  N RKL+  EW I NEV SLL  V E+ +++QGS DTHI Q MF + E+ ++  ED H IR
Sbjct:    1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGI---AAKGRKNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIR 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50516.12296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KJ52_9PHAE2.630e-13774.16Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KAN7_9PHAE4.890e-10575.78Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JRT6_9PHAE5.070e-9759.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTB8_9PHAE1.820e-9657.09Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE1.340e-9557.45Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5JZU3_9PHAE9.010e-9557.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQI6_9PHAE3.580e-9152.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXV5_9PHAE3.670e-8855.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDJ6_9PHAE1.540e-5853.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAS2_9PHAE8.340e-5853.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50516contigH-elongata_contig50516:789..2570 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score64.7
Seed ortholog evalue4.4e-08
Seed eggNOG ortholog7029.ACYPI26143-PA
EggNOG free text desc.hAT family C-terminal dimerisation region
EggNOG OGs39MXN@33154,3CPH5@33208,3E5N4@33213,3T02X@50557,42APZ@6656,KOG1121@1,KOG1121@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1319
Cds size468
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50516.12296.1prot_H-elongata_contig50516.12296.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50516 1282..1932 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930830.5246134-UTR-H-elongata_contig50516:788..9941622930830.5246134-UTR-H-elongata_contig50516:788..994Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50516 789..994 +
1691679588.934056-UTR-H-elongata_contig50516:788..9941691679588.934056-UTR-H-elongata_contig50516:788..994Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50516 789..994 +
1622930830.5454395-UTR-H-elongata_contig50516:1257..12811622930830.5454395-UTR-H-elongata_contig50516:1257..1281Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50516 1258..1281 +
1691679588.9435248-UTR-H-elongata_contig50516:1257..12811691679588.9435248-UTR-H-elongata_contig50516:1257..1281Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50516 1258..1281 +
1622930830.5911603-UTR-H-elongata_contig50516:1932..22241622930830.5911603-UTR-H-elongata_contig50516:1932..2224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50516 1933..2224 +
1691679588.9674041-UTR-H-elongata_contig50516:1932..22241691679588.9674041-UTR-H-elongata_contig50516:1932..2224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50516 1933..2224 +
1622930830.6051817-UTR-H-elongata_contig50516:2241..25701622930830.6051817-UTR-H-elongata_contig50516:2241..2570Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50516 2242..2570 +
1691679588.9755292-UTR-H-elongata_contig50516:2241..25701691679588.9755292-UTR-H-elongata_contig50516:2241..2570Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50516 2242..2570 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930830.5616739-CDS-H-elongata_contig50516:1281..16161622930830.5616739-CDS-H-elongata_contig50516:1281..1616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50516 1282..1616 +
1691679588.9511764-CDS-H-elongata_contig50516:1281..16161691679588.9511764-CDS-H-elongata_contig50516:1281..1616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50516 1282..1616 +
1622930830.5757246-CDS-H-elongata_contig50516:1799..19321622930830.5757246-CDS-H-elongata_contig50516:1799..1932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50516 1800..1932 +
1691679588.9591572-CDS-H-elongata_contig50516:1799..19321691679588.9591572-CDS-H-elongata_contig50516:1799..1932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50516 1800..1932 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50516.12296.1

>prot_H-elongata_contig50516.12296.1 ID=prot_H-elongata_contig50516.12296.1|Name=mRNA_H-elongata_contig50516.12296.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MMGATVTPRDVFLAFTVDQGSNVVNACKNLGVEVLKCNAHHLNSVTMWAL
GVNGSSVKTCENPDMEKQMKRLAAVVGVWSHSAVNNDELKNIQTLQEEFL
QVYELVRRNDTRWTTQHAMMVRLLKLKTSIVEYFRRHDGNKRKLSTREWR
ITNEV*
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mRNA from alignment at H-elongata_contig50516:789..2570+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50516.12296.1 ID=mRNA_H-elongata_contig50516.12296.1|Name=mRNA_H-elongata_contig50516.12296.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1782bp|location=Sequence derived from alignment at H-elongata_contig50516:789..2570+ (Himanthalia elongata Himel1 dioecious)
AACGCGAGTCGCGTCGGGAGCTTGGGTACAAAGGTCCCCTTCTTGATACC CAGCTTGACCTCACCACCGTCGCCAACGAAGAGTACATCACGTTCTCCGT ATCGTACATCGCTCAAGGCGAAACGGTGATCACGCGCGTCGGCCTGGCGA CACGAGCTTTCCCTGGCTCTCACGCCACTGGCGACATCGAACCATGGATC GAGCAGGCGAGTTTTAAATCGTAAAATCTTGCTTATTTTCCAAGAGCATG AAATGGTGATGCAAAATACAAAATTCAAAATTCGTGTTGGATAATGCATT TTACGCCTAGCTAAGCATATGGCATATTAATCGCTCGCGTCGGTCATGTG TGGGTGTTGCGGACGTTGCCGAGTTACATTTGACTTTAAAAATTAAAAAT TATAAAATAAAATATGAAATGCTTGTTCGTTGTTTGTCTGGATCGGTATT TGGTATTTGTACATGGCAGCTGACGCCGGAGTTGTTCGGGGACATGATGG GAGCCACCGTGACGCCGCGGGACGTCTTCCTCGCCTTCACCGTGGACCAA GGAAGCAACGTGGTAAACGCGTGTAAGAATCTGGGTGTTGAAGTACTCAA GTGCAACGCCCACCACCTCAACTCCGTCACGATGTGGGCGTTGGGGGTAA ACGGTTCTTCTGTGAAAACATGTGAAAACCCGGACATGGAGAAGCAGATG AAGAGGCTGGCGGCGGTAGTGGGGGTATGGAGCCACTCCGCTGTCAACAA CGACGAACTCAAGAACATCCAGACCCTACAAGAGGAGTTCCTGCAAGTCT ACGAGCTCGTCAGGCGAAACGACACGAGGTGAGCTGTTCAAATTAATTAC TCCAGTATATAATTTGCGCTTCAGTTTGTGTTTTGTGTTTTATACTCGGC CGTCGAATGCCAGATATGAAGCCTTCGCTTTTCGGCCGTTTAAGTGATAC CGGTACGATACTCTGCACCCTACCCGCCTCTCCACGCCCCTAAACGTTAT TGTACGGACAGGTGGACCACGCAACATGCCATGATGGTCCGTCTACTCAA GCTCAAGACGTCTATTGTGGAGTACTTCCGGAGGCACGACGGCAACAAGC GGAAGTTGTCGACCCGCGAGTGGAGGATCACCAACGAGGTGTGAAGCTTG CTGGACGTCGTCGTGGAGGTGGCCGTCAAAATCCAAGGTTCCACCGACAC CCACATCAGCCAGACCATGTTCAACATGCTCGAGATCAAGGATATTTTTG AGGAGGACGGGCACAAGATCCGCGTTCTAGACCAACTCTACGACGGCTGT AACGTGCTGAAGGAGAAGCAAAGCTCAAAGCTTGGACGACTTGGGCATCG AGGCGCGAACGGTTCGGGATGTCATGCTTACGAGGTTGGAGAAGAAGGAG GTCGGGCAGGCAAGAATGCCCGTTGAGCGTATCTGCGCACTCCTGGACCC GAGGCGGAAGGGTTTTTCAGCACCACATCTCGTCAAAGGCAGCGAATCTC TGAAGGCTCTGACCATCGATTATGTCAAGAGCGTCGTCCAGAGGTTCAAA GAGGTGGTCGGGTCGACTTCTTCAGTTGGTGGTGCTGGTGATGGCGGCGG CGGCAGTGGACAAGCCAGCCTGCACCCAAGAAGCCGAAGGTCGCCTCGGA CCTCGAAGAAAGGAGAAGCGCGCGTCTCGCCAAGTCAAAGGCATCTAGCG TCGCCGGCACAGCTGCAACGCAGAGGCTCCCTCTCGCGAAGCGGCGCCTG CTCATCAAACGGGAGCTGCGGATGTACGTGGC
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Coding sequence (CDS) from alignment at H-elongata_contig50516:789..2570+

>mRNA_H-elongata_contig50516.12296.1 ID=mRNA_H-elongata_contig50516.12296.1|Name=mRNA_H-elongata_contig50516.12296.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig50516:789..2570+ (Himanthalia elongata Himel1 dioecious)
ATGATGGGAGCCACCGTGACGCCGCGGGACGTCTTCCTCGCCTTCACCGT
GGACCAAGGAAGCAACGTGGTAAACGCGTGTAAGAATCTGGGTGTTGAAG
TACTCAAGTGCAACGCCCACCACCTCAACTCCGTCACGATGTGGGCGTTG
GGGGTAAACGGTTCTTCTGTGAAAACATGTGAAAACCCGGACATGGAGAA
GCAGATGAAGAGGCTGGCGGCGGTAGTGGGGGTATGGAGCCACTCCGCTG
TCAACAACGACGAACTCAAGAACATCCAGACCCTACAAGAGGAGTTCCTG
CAAGTCTACGAGCTCGTCAGGCGAAACGACACGAGATGATGGGAGCCACC
GTGACGCCGCGGGACGTCTTCCTCGCCTTCACCGTGGACCAAGGAAGCAA
CGTGGTAAACGCGTGTAAGAATCTGGGTGTTGAAGTACTCAAGTGCAACG
CCCACCACCTCAACTCCGTCACGATGTGGGCGTTGGGGGTAAACGGTTCT
TCTGTGAAAACATGTGAAAACCCGGACATGGAGAAGCAGATGAAGAGGCT
GGCGGCGGTAGTGGGGGTATGGAGCCACTCCGCTGTCAACAACGACGAAC
TCAAGAACATCCAGACCCTACAAGAGGAGTTCCTGCAAGTCTACGAGCTC
GTCAGGCGAAACGACACGAGGTGGACCACGCAACATGCCATGATGGTCCG
TCTACTCAAGCTCAAGACGTCTATTGTGGAGTACTTCCGGAGGCACGACG
GCAACAAGCGGAAGTTGTCGACCCGCGAGTGGAGGATCACCAACGAGGTG
TGAGTGGACCACGCAACATGCCATGATGGTCCGTCTACTCAAGCTCAAGA
CGTCTATTGTGGAGTACTTCCGGAGGCACGACGGCAACAAGCGGAAGTTG
TCGACCCGCGAGTGGAGGATCACCAACGAGGTGTGA
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