prot_H-elongata_contig50395.12274.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig50395.12274.1 vs. uniprot
Match: A0A6H5JVI5_9PHAE (BHLH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI5_9PHAE) HSP 1 Score: 127 bits (318), Expect = 6.730e-30 Identity = 123/343 (35.86%), Postives = 163/343 (47.52%), Query Frame = 0
Query: 1 VNERFEQLLRVLEEAEATSGLEPAPTPEGQTAANACVNGRRVEVLSRTITVLKKLMREKTKSLSVF---AED-------GNSHG------EGKSGDSAIAS---------------------------GVMEANSAAATGS-TQAPPT-------------------QQHIALRLH-EHSSLSMPTGFMGMPNIGVSQMNASLAAAGIPQGLSGQPVFIAVPVFMPPGQGLSSV----------DNPGQAPGAT-VLAPVV---------------NVTPETGEKAVVDAGGANVPMTKELK---MPPDVNLESMISLQMPQFVTEVLATDEGDEKPTHAVCA 250
VNE+F+QLL+VLEEAEATSGLEP +G+TAA+AC+NGRRVEVLSRTI V+KKL+RE+ ++L+ A+D G S+G EG D S V+++N AAA G+ QA H+A+ + H S+ M GF G+P V GIP G G P+F AVP+++P GQG+ V ++ Q P AT V AP + DA A VP K +P + +SM++LQMPQFVT+ L+ +EG EKPTHAVCA
Sbjct: 234 VNEKFDQLLQVLEEAEATSGLEPPAAKDGKTAAHACINGRRVEVLSRTIQVVKKLLRERREALAGVPPPADDTLAAVAAGISNGWQEETAEGPVLDGGFRSEVEENXXXXXXXXXXXXXXXXXXXXTRDVIDSNEAAAEGADAQAEAAIAATMVXXXEGXXAKHHSVMHHVAMSVSGHHPSMMMAPGFTGVPGHPVPS-----PPHGIP-GHPGGPIFFAVPMYIPQGQGMPPVAASTATTAAAEHAAQVPAATAVAAPSLAXXXXXXXXXXXXXXXXXXXXXXXXXXDATEA-VPAPSGKKTWAVPAGMGYQSMMTLQMPQFVTQALSGEEGSEKPTHAVCA 569
BLAST of mRNA_H-elongata_contig50395.12274.1 vs. uniprot
Match: D7FS24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS24_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 2.090e-8 Identity = 55/176 (31.25%), Postives = 75/176 (42.61%), Query Frame = 0
Query: 107 HIALRLH-EHSSLSMPTGFMGMPNIGVSQMNASLAAAGIPQGLSGQPVFIAVPVFMPPGQGLSSV----------------------------DNPGQAPGATVLAPVVNVTPETGEKAVVDAGGANVPMTKELK---MPPDVNLESMISLQMPQFVTEVLATDEGDEKPTHAVCA 250
H+A+ + H S+ M GF G+P V GIP G G P+F AVP+++P GQG+ + VVDA A VP K +P + +SM++LQMPQFVT+ L+ +EG+EKPTHAVCA
Sbjct: 3 HVAMSVSGHHPSMMMAPGFTGVPGHSVPSPQH-----GIP-GHPGGPIFFAVPMYIPQGQGMPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVDATEA-VPAPSGKKTWAVPAGMGYQSMMTLQMPQFVTQALSGEEGNEKPTHAVCA 171 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50395.12274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig50395.12274.1 ID=prot_H-elongata_contig50395.12274.1|Name=mRNA_H-elongata_contig50395.12274.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=251bpback to top |