prot_H-elongata_contig50242.12252.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50242.12252.1
Unique Nameprot_H-elongata_contig50242.12252.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length223
Homology
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BLAST of mRNA_H-elongata_contig50242.12252.1 vs. uniprot
Match: D8LDX3_ECTSI (Exocyst subunit Exo70 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX3_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 7.820e-90
Identity = 149/230 (64.78%), Postives = 184/230 (80.00%), Query Frame = 0 
Query:    1 LKEGDVPSDVVGSLLEMSDAMHKGSYSLQDILKVG-DVSGSKSDKSGHRKR--------PSSSNGRGGGNKATEALAAVRRRLSQACLHTITNMAGAVSNDPKLRRHLPDDGSVHPLASNVLLGVKRLMRFRRGYEDLVKDAQLPWDPTDVRAARPFNSNSSSPVRAEGTTAAARACPKFTVLVNHLVKTLFVNLTEKSSSYPTATLPGAALRDIFLVNNAEYVLTKAKV 221
            +K+GD+P+D+V +L+EMSDA+HKGSYSLQDILKVG D SGSK D  G++ R        P S+  RG  NKAT+ALAAV+RRLS+ACL T  ++A AVS DPKLRRH+PD+G+VHPL+SNVL G+KR+MRFRRGYE+LV+ AQ+PWDP      R    + +SPVR  G T+A+ ACP+FT LVNHL+KTLFVNLTEKS SYPTATLPGAALR++FL+NNAEYVL  AK+
Sbjct:  369 VKDGDIPADIVVALMEMSDALHKGSYSLQDILKVGGDDSGSKGDDRGYQSRRGSVVYASPDSAARRGRTNKATDALAAVQRRLSRACLQTFADLAEAVSTDPKLRRHVPDNGAVHPLSSNVLRGIKRVMRFRRGYEELVQGAQMPWDPESAPGDRTSRGSKNSPVRERGATSASNACPRFTTLVNHLIKTLFVNLTEKSGSYPTATLPGAALRELFLLNNAEYVLANAKM 598
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BLAST of mRNA_H-elongata_contig50242.12252.1 vs. uniprot
Match: A0A835YN31_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN31_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.930e-28
Identity = 78/217 (35.94%), Postives = 117/217 (53.92%), Query Frame = 0 
Query:   14 LLEMSDAMHKGSYSLQDILKVGDVSGSKSDKSGHRKRPSSSNGRGGGNKATEALAAVRRRLSQACLHTITNMAGAVSNDPKLRRHLPDDGSVHPLASNVLLGVKRLMRFRRGYEDLVKD----AQLPWD------PTDVRAARPFNSNSSSPVRAEGTTAAARACPKFTVLVNHLVKTLFVNLTEKSSSYPTATLPGAALRDIFLVNNAEYVLTKAK 220
            LLE+ D +++G+  L  +L++G   G++ D                 N  T +L++V+ RL +  L +  ++  AV +DP  +R++P++ SVH L SN L  +KR+  FR GYE L +      +LPWD      P    + R    + + PV AE + A AR CP+F   VNHLV  L  NL EK+ +YPT     A  R +FL+NNA Y+LT A+
Sbjct:  305 LLEVGDTLNRGTALLLRVLRMG---GAEDD-----------------NLLTNSLSSVQARLCRTALQSCLDLVDAVQSDPCGKRNVPENASVHVLTSNTLRAIKRITPFREGYETLAQPRAAGVRLPWDSEGATPPPQTSSTRTLQRDGAPPVDAEHSEA-ARQCPRFAAFVNHLVARLLENLLEKAKAYPTGRADEAR-RQLFLLNNANYLLTNAR 499
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50242.12252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDX3_ECTSI7.820e-9064.78Exocyst subunit Exo70 family protein n=2 Tax=Ectoc... [more]
A0A835YN31_9STRA2.930e-2835.94Exocyst subunit Exo70 family protein n=1 Tax=Tribo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.170coord: 17..222
e-value: 5.2E-16
score: 60.3
NoneNo IPR availablePANTHERPTHR12542:SF7EXOCYST COMPLEX COMPONENT 7coord: 54..218
IPR004140Exocyst complex component Exo70PFAMPF03081Exo70coord: 13..220
e-value: 2.1E-17
score: 63.2
IPR004140Exocyst complex component Exo70PANTHERPTHR12542EXOCYST COMPLEX PROTEIN EXO70coord: 54..218
IPR016159Cullin repeat-like-containing domain superfamilySUPERFAMILY74788Cullin repeat-likecoord: 57..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50242contigH-elongata_contig50242:379..3856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50242.12252.1mRNA_H-elongata_contig50242.12252.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50242 379..3856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50242.12252.1 ID=prot_H-elongata_contig50242.12252.1|Name=mRNA_H-elongata_contig50242.12252.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bp
LKEGDVPSDVVGSLLEMSDAMHKGSYSLQDILKVGDVSGSKSDKSGHRKR
PSSSNGRGGGNKATEALAAVRRRLSQACLHTITNMAGAVSNDPKLRRHLP
DDGSVHPLASNVLLGVKRLMRFRRGYEDLVKDAQLPWDPTDVRAARPFNS
NSSSPVRAEGTTAAARACPKFTVLVNHLVKTLFVNLTEKSSSYPTATLPG
AALRDIFLVNNAEYVLTKAKVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004140Exo70
IPR016159Cullin_repeat-like_dom_sf