prot_H-elongata_contig5021.12248.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig5021.12248.1 vs. uniprot
Match: D8LS81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS81_ECTSI) HSP 1 Score: 177 bits (449), Expect = 1.470e-49 Identity = 90/147 (61.22%), Postives = 107/147 (72.79%), Query Frame = 0
Query: 81 DDTLPFVRSVDELRRFVRLEGSVVGHGRCMWADTFAHHVVSRRLGLTILFVDMERAKTAWPYRVLARAVKEGGGEVEERFVVLKREPNHFVLIKTLPVVVPDEAIDAQASPK--------------KGQACFRRSELPDVMRRLWQI 213
++ LP V +V+ELRRFVRLEGS VGHG CMWADT AHHVVSRRL +TILFVDMER K AWPYRVLAR V + +ERFVVLKREP+HFVL++T+P P+++ A S +GQACF RSELPDV+RRLWQ+
Sbjct: 342 NEGLPVVETVEELRRFVRLEGSDVGHGNCMWADTHAHHVVSRRLKITILFVDMEREKRAWPYRVLARTVTDSDDGEDERFVVLKREPSHFVLLETVPS--PEDSDGAVGSDSGXXXXXXXXXXKGGRGQACFSRSELPDVVRRLWQL 486
BLAST of mRNA_H-elongata_contig5021.12248.1 vs. uniprot
Match: A0A6H5L3H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H2_9PHAE) HSP 1 Score: 180 bits (456), Expect = 7.680e-49 Identity = 91/147 (61.90%), Postives = 109/147 (74.15%), Query Frame = 0
Query: 81 DDTLPFVRSVDELRRFVRLEGSVVGHGRCMWADTFAHHVVSRRLGLTILFVDMERAKTAWPYRVLARAVKEGGGEVEERFVVLKREPNHFVLIKTLPVVVPDEAIDAQASPK--------------KGQACFRRSELPDVMRRLWQI 213
++ LP V +V+ELRRFVRLEGS VGHG CMWADT AHHVVSRRL +TILFVDMER K AWPYRVLAR V + E +ERFVVLKREP+HFVL++T+P P+++ A +S +GQACF RSELPDV+RRLWQ+
Sbjct: 662 NEGLPVVETVEELRRFVRLEGSDVGHGNCMWADTHAHHVVSRRLKITILFVDMEREKRAWPYRVLARTVTDSDDEEDERFVVLKREPSHFVLLETVPS--PEDSDGAVSSXXXXXXXXXXXXXKGGRGQACFSRSELPDVVRRLWQL 806
BLAST of mRNA_H-elongata_contig5021.12248.1 vs. uniprot
Match: A0A836CA53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA53_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.770e-19 Identity = 57/134 (42.54%), Postives = 72/134 (53.73%), Query Frame = 0
Query: 80 GDDTLPFVRSVDELRRFVRLEGSVVGHGRCMWADTFAHHVVSRRLGLTILFVDMERAKTAWPYRVLARAVKEGGGEVEERFVVLKRE--PNHFVLIKTLPVVVPDEAIDAQASPKKGQACFRRSELPDVMRRLW 211
G+ P V++V++L+ ++R EGS G G CMWAD A VV++RL L ILFVDMERA+ AWPYR LA E +VVLKRE HFV I G A F +LP+ +R LW
Sbjct: 202 GEARGPAVQTVEQLQEYIRREGSACGAGDCMWADDAAFAVVAQRLRLGILFVDMERARCAWPYRQLAACEGEPA-----HYVVLKREGPAGHFVYI----------------GAASGAAAFALRDLPNAVRALW 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5021.12248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig5021.12248.1 ID=prot_H-elongata_contig5021.12248.1|Name=mRNA_H-elongata_contig5021.12248.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bpback to top |