mRNA_H-elongata_contig11509.1203.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 117 bits (294), Expect = 6.980e-29 Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMSFSPNEHSESAWELARSMVVGYIEEEDD 241
NG SWV+VDGAILDV +F++RHPGG R+I+NALGTDIT EL G D S+G AMSFSP+ HSE AW + R++VVGYIEE +D
Sbjct: 1164 NGQSWVLVDGAILDVSDFAKRHPGGQRLIINALGTDITQELLGEDLSVGHAMSFSPHVHSERAWTILRTLVVGYIEEGED 1243
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: D7FX04_ECTSI (Dopamine beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI) HSP 1 Score: 114 bits (284), Expect = 1.550e-27 Identity = 53/76 (69.74%), Postives = 62/76 (81.58%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMSFSPNEHSESAWELARSMVVGYIE 229
NG SWV+VDGAILDV F++RHPGG R+I+NALGTDIT EL G D S+G AMSFSP+ HSE AW + R +VVGYIE
Sbjct: 474 NGQSWVLVDGAILDVSEFAQRHPGGRRLIINALGTDITQELLGEDLSVGHAMSFSPHAHSERAWTILRRLVVGYIE 549
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 112 bits (281), Expect = 3.970e-27 Identity = 50/80 (62.50%), Postives = 65/80 (81.25%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMSFSPNEHSESAWELARSMVVGYIEEEDD 241
NG SW++VDGAILDV F+ RHPGG R+I+NALGTD+T EL G + S+G AMSFSPN HSE AW + + +V+GYI+E+D+
Sbjct: 992 NGQSWLLVDGAILDVSEFTARHPGGRRLILNALGTDVTAELLGEEMSVGHAMSFSPNVHSERAWTILKGLVIGYIDEDDE 1071
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 107 bits (266), Expect = 4.190e-25 Identity = 48/79 (60.76%), Postives = 64/79 (81.01%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMSFSPNEHSESAWELARSMVVGYIEEED 238
+G SW++VD A+LDV +F+ RHPGG R+I+NALGTD+T EL G + S+G AMSF P+ H+ SAW + RS+VVGYIEE+D
Sbjct: 898 SGQSWLMVDEAVLDVSDFAHRHPGGRRLILNALGTDVTQELLGQENSVGHAMSFPPHAHTGSAWRIIRSLVVGYIEEKD 976
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 107 bits (266), Expect = 4.210e-25 Identity = 49/82 (59.76%), Postives = 67/82 (81.71%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMSFSPNEHSESAWELARSMVVGYIEEEDDSE 247
+G SW++VD A+LDV +F++RHPGG R+I+NALGTD+T EL G + S+G AMSF P+ H+ SAW + RS+VVGYIEE+D +E
Sbjct: 893 SGQSWLMVDEAVLDVSDFAQRHPGGRRLILNALGTDVTQELIGQENSVGHAMSFPPHVHTGSAWRIIRSLVVGYIEEKDAAE 974
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.070e-24 Identity = 47/79 (59.49%), Postives = 65/79 (82.28%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMSFSPNEHSESAWELARSMVVGYIEEED 238
+G +W++VD A+LDV +F++RHPGG R+I+NALGTD+T EL G + S+G AMSF P+ H+ SAW + RS+VVGYIEE+D
Sbjct: 894 SGQTWLMVDEAVLDVSDFAQRHPGGRRLILNALGTDVTQELLGQENSVGHAMSFPPHVHTGSAWRIIRSLVVGYIEEKD 972
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: D8LB74_ECTSI (Delta-9 desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB74_ECTSI) HSP 1 Score: 103 bits (256), Expect = 9.390e-24 Identity = 48/83 (57.83%), Postives = 68/83 (81.93%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMS-FSPNEHSESAWELARSMVVGYIEEEDDSE 247
NG SWVIVDGA+L+V +F++RHPGG R+I+NA+GTD+T+E G + S+G + + P+ H+++A E+ARS+VVGYIEEEDD E
Sbjct: 129 NGRSWVIVDGAVLNVSDFAKRHPGGIRLIINAMGTDVTSEFLGENASVGNPGTVYKPHRHTDTALEIARSLVVGYIEEEDDME 211
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: A0A6H5JUS3_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS3_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.840e-23 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMSFSPNEHSE---------SAWELARSMVVGYIEEEDDSE 247
NG SW++VD AILDV F+ RHPGG R+I+NA GTD+T+EL G D S+G AMSFSPN HSE AW + + +V+ YI+E+D+ E
Sbjct: 79 NGQSWLLVDDAILDVPEFAARHPGGWRLIINAPGTDVTDELLGEDMSVGHAMSFSPNVHSEVSQIVVFVVRAWTILKRLVIDYIDEDDEQE 169
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: A0A6H5JX59_9PHAE (Cytochrome b5 heme-binding domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX59_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 3.330e-13 Identity = 32/62 (51.61%), Postives = 48/62 (77.42%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMS-FSPNEHSE 184
NG SWVIVDGA+L+V +F+ RHPGG R+I+NA+GTD+T+E G + S+G + + P+ H++
Sbjct: 200 NGRSWVIVDGAVLNVSDFAERHPGGMRLIINAMGTDVTSEFLGENASVGNPGTVYEPHPHTD 261
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Match: D8LFE2_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE2_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 5.790e-11 Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query: 2 NGMSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKG 130
N SW+ VD AILDV F+ RHPGG R+I+NALGTD+T E+ G
Sbjct: 13 NSQSWLFVDSAILDVSEFAARHPGGRRLILNALGTDVTAEILG 55 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11509.1203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11509.1203.1 >prot_H-elongata_contig11509.1203.1 ID=prot_H-elongata_contig11509.1203.1|Name=mRNA_H-elongata_contig11509.1203.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp MSWVIVDGAILDVGNFSRRHPGGARVIVNALGTDITNELKGVDQSIGRAMback to top mRNA from alignment at H-elongata_contig11509:7983..8525- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11509.1203.1 ID=mRNA_H-elongata_contig11509.1203.1|Name=mRNA_H-elongata_contig11509.1203.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=543bp|location=Sequence derived from alignment at H-elongata_contig11509:7983..8525- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11509:7983..8525- >mRNA_H-elongata_contig11509.1203.1 ID=mRNA_H-elongata_contig11509.1203.1|Name=mRNA_H-elongata_contig11509.1203.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at H-elongata_contig11509:7983..8525- (Himanthalia elongata Himel1 dioecious)back to top |