prot_H-elongata_contig48333.11983.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48333.11983.1
Unique Nameprot_H-elongata_contig48333.11983.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length197
Homology
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: D8LKZ6_ECTSI (Endo/excinuclease amino terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ6_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.950e-52
Identity = 89/124 (71.77%), Postives = 102/124 (82.26%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNSGFEA 124
            MVAIVHGFPSKSSALQFE+AWQHPQ+DRRIKVKV DLPV+SRRT+GV  KLRLCKAMLCLDPWARYGLGIR LRE++A +Y+ L+LPQPLP  G P TE++ G +EGLP Y S   +     EA
Sbjct:   61 MVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVPDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYSKLNLPQPLPVKGDPDTELSTGAQEGLPVYKSPPGSQEERLEA 184          
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A836CE53_9STRA (GIY-YIG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE53_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.840e-22
Identity = 52/115 (45.22%), Postives = 67/115 (58.26%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQP--LPPAGAPHTEVAIGGREGLPAYAS 113
            M  +V GFPSKS+ALQFE AWQHP +DR +K KV  L ++ R + G+ AKL +CKA++CL+PW RYGLG        A  + A  LP    L P         +G  + L  YAS
Sbjct:   37 MALVVTGFPSKSAALQFEWAWQHPYKDRHVKGKVGALALKGRGSYGLKAKLAICKALMCLEPWCRYGLGTHFADNDIAAVFRAAALPDSDALQPRALDDAPRCVGPLDALAVYAS 151          
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: UPI000719E56F (structure-specific endonuclease subunit slx1-like isoform X1 n=2 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E56F)

HSP 1 Score: 85.9 bits (211), Expect = 1.030e-16
Identity = 64/210 (30.48%), Postives = 100/210 (47.62%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPA-------YASLAEAPNSGFEALRVPGT--KCSLCARLLYRGSMVLCC--QSCGVPAHVRCLAARMLR--ESGKSSEIIPSEGYCPRPSCGRHLLWSQLVR 197
            MV ++HGFP+K SAL+FE AWQHP++ RR+      LP +           R+   ML   PW R  L IR L++++   +     P    P   P     +  ++  PA           A   +S   +L +  T  +C++C + L   +  + C   +C + +HV CLA+  L+  +   S +I+P EG CPR  C   +LW  L+R
Sbjct:   62 MVLMIHGFPTKISALRFEWAWQHPKKSRRL----HHLPGKRSSEKKFEYCFRVVCEMLRTAPWERLPLTIRWLKQEYQLDFPVGREP----PTHMPMAYGVVFNKKVKPAERIETNSQPQQAATSDSDLPSLSISSTCQRCAVCVKKLRPDANTISCLAPTCNMKSHVICLASNFLKYTKESDSQQILPVEGKCPR--CKIEVLWGDLIR 261          
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: UPI000626E17A (structure-specific endonuclease subunit slx1 n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI000626E17A)

HSP 1 Score: 82.8 bits (203), Expect = 9.130e-16
Identity = 65/198 (32.83%), Postives = 94/198 (47.47%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNSGFEALRVPGTKCSLCARLLYRGSMVLCCQS-CGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLVR 197
            MV IV+GFPS +SAL+FE AWQHP   RR+K     +P    R       L +   ML + PW R  L +  L  +FA  Y+        PP   P T  ++  ++            ++ +EA +     CSLC  ++     V C +S C + AH+ CLA     E  K   I+P +G CP  +C  ++LW  L+R
Sbjct:   60 MVLIVYGFPSSTSALRFEWAWQHPAISRRLK----HVPRRKSRQKVFDFCLLVLSEMLKVGPWVRLPLTLHWLDSEFADKYSY----SISPPMHMPITYGSVTSKKNTTKSKKKRSEKDTFYEA-KDSLALCSLCGLIVNAEDKVTCIKSDCLLVAHLICLA----EEFSKDEMILPIDGICP--ACKTNVLWGDLIR 242          
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A1D1W0M2_RAMVA (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1W0M2_RAMVA)

HSP 1 Score: 79.3 bits (194), Expect = 2.510e-14
Identity = 61/204 (29.90%), Postives = 96/204 (47.06%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAA-LHLPQPLPP-AGAPHTEVAIGGREGLPAYASLAEAPNSGFEALRVP----GTKCSLCARLLYRGSMVLCC-QSCGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLVR 197
            +V IV+GF +  +ALQFE AWQHP + RR+    R +  +  +   +  +LRL   ML ++PW    L ++ L  ++   + A L  P  +P  +GA  T+         P   ++    N+    + +      TKC +C     +   V C   +C    H+ CLA   L E  +S   +P +G CP  SC   LLW+ L+R
Sbjct:   63 VVVIVYGFMTNIAALQFEWAWQHPDESRRL----RSVGKKKSKENALTYRLRLMAEMLSIEPWNNLALTVQWLNSEYEIEFPANLKPPSHIPILSGAVRTKKVTAPE--TPVCGNVVSLDNTDASIIAIQESPSDTKCGICQLACEKPHRVTCLVTTCSSTYHLICLAKHFLGEDKQS--FVPLKGECP--SCRSTLLWADLIR 256          
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A7S0IFD8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IFD8_MICPS)

HSP 1 Score: 79.3 bits (194), Expect = 5.650e-14
Identity = 72/234 (30.77%), Postives = 102/234 (43.59%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLP-----AYA---------------------SLAEAPN-SGFEALRVPGTKCSLCARLLYRGSMV-LCCQSCGVPAHVRCLAARMLRESGKSSE----------IIPSEGYCPRPSCGRHLLWSQLV 196
            MV +VHGFPSK  A+QFE AWQ P   R ++     L V S R+  +  K RL  AML + PW    L +  L  ++A+      L +    A   H EVA+G  + L      ++A                     S++EAP+ SG  A   P  +C+ C     RG+   + C  C   AH RC+A+       +S +          +IP  G CP  +CG  L W  +V
Sbjct:   67 MVLLVHGFPSKVQAMQFEWAWQKPALSRAVREAAARLKV-SDRSSSLVNKTRLVMAMLHVSPWNNLPLRVHFLNPEYAK------LAKDKCDAPPEHVEVAVGDMDALKRSVGGSFADGKDLDDSEDEDSRVVTVDGDSISEAPSASGAFA---PRRRCAACGGEGVRGAGARVACPRCDCVAHPRCMASHFFASCAQSEKFGPRKERARALIPRGGPCP--ACGASLSWGAVV 288          
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A8H6SGZ9_MYCCL (Structure-specific endonuclease subunit SLX1 n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A8H6SGZ9_MYCCL)

HSP 1 Score: 79.7 bits (195), Expect = 5.820e-14
Identity = 62/209 (29.67%), Postives = 94/209 (44.98%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTY-AALHLPQPLPPAGAPHTEV-AIGGREGLPAYASLAEAPNSGFEALRVPGTKCSLCARLLYRGSMVLCCQS----------CGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLVR 197
            M  IVHGFPSK +ALQFE AWQH  + R ++ +     +   R  G+   +R  + M+   P+  + L I+L  E+  + +  A     PLPP      E+  + GR G+   A          +         S    LL  G+++ C  S          C   +H+ CL+ + LR +  SS IIP  G C    CG ++LW  ++R
Sbjct:   68 MQMIVHGFPSKLTALQFEWAWQHVHRTRHLRDESGKALLS--RATGLNNNIRAVRLMIGTHPYKTWPLHIKLFTEQAVKGWNTAQKTTPPLPPGFTSTIELEGVDGRSGI---AGTGRKVPICVDDATFTSAHLSKNTALLASGALIRCADSLTTALCPALGCSAVSHLTCLSQQFLRAAPSSSHIIPRGGNCHE--CGTYVLWGDIIR 269          
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A0D2PGU1_HYPSF (Structure-specific endonuclease subunit SLX1 n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2PGU1_HYPSF)

HSP 1 Score: 78.6 bits (192), Expect = 1.640e-13
Identity = 68/220 (30.91%), Postives = 103/220 (46.82%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAA-LHLPQ--PLPPAGAPHTEV-AIGGREGLPAYASLAE--APNSGFEALRVP----------GTKCSLC-ARLLYRGSMVLCC-----QSCGVPAHVRCLAARML-RESGKSSEIIPSEGYCPRPSCGRHLLWSQLVR 197
            M  IVHGFPS+ +ALQFE AWQHP + R ++     L  E RR+  +   + + ++M+   P+ R+ L ++L  E+    +AA +  P   PLPP      E+  + G+ G P         A ++ F A  +           G  C++C A L    S  L       + C   +H+ CLA   L  E G  +E IP  G+C   +C  + LW  +VR
Sbjct:   75 MQMIVHGFPSRLAALQFEWAWQHPHKSRHMRDSTGRLFGE-RRSKAMKKNVAIVRSMIARHPFNRWPLHVKLFTEEAVAHWAASVRAPHVAPLPPGFTCAVELEGVDGKSGHPGSGRTGPMAADDAEFTAALLAKNTALIASGRGLDCTVCHAPLDMHASNALATALCPHEGCVAASHLACLAQHFLTEEGGAGTEFIPRGGHCA--ACAEYTLWGDVVR 291          
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A0C2YVX3_HEBCY (Structure-specific endonuclease subunit SLX1 n=1 Tax=Hebeloma cylindrosporum h7 TaxID=686832 RepID=A0A0C2YVX3_HEBCY)

HSP 1 Score: 77.0 bits (188), Expect = 5.580e-13
Identity = 62/217 (28.57%), Postives = 107/217 (49.31%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAAL-HLPQPLPPAGAPHTEV-AIGGREGLPAYASLA--EAPNSGFE--------ALRVPGTK--CSLCARLLYRGS----MVLCCQS--CGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLVR 197
            M  IVHGFPS+ +ALQFE AWQHP + R ++ +   +   +R +  +   + + + M+   P+  + L ++L  E+  + + A  ++  PLPP      E+  + G+ G P        +  ++ F         AL   G +  CS+C + +   S    +   C S  C   +H+ CL+   ++ES  ++EIIP  G+C   SC  ++LW  +VR
Sbjct:   72 MQMIVHGFPSRLAALQFEWAWQHPHKSRHLRDENGSI-FGTRASKLLKKNIGIVRTMISKHPFNTWPLHVKLFTEEAVQCWKAFANVDPPLPPGFTCSVELEGVDGKSGHPGSGRQGPIDVDDADFTYTLLAKNAALVASGRRLDCSVCHQSIENYSSDHLVTALCPSLDCMAVSHLTCLSQDFIKESSGTTEIIPRGGHCK--SCREYILWGDVVR 285          
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: UPI0011BF8620 (structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Drosophila navojoa TaxID=7232 RepID=UPI0011BF8620)

HSP 1 Score: 73.6 bits (179), Expect = 3.720e-12
Identity = 67/204 (32.84%), Postives = 95/204 (46.57%), Query Frame = 0
Query:    1 MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAI-GGREGLPAYASLAEAPNSGFEALRVPGTKCSLCARLLYRGSM-------VLCCQSCGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLV 196
            MV IVHGFP+K  ALQFE AWQ P    R+K+   DL  +  R        R+   ML + PW R  L +R L   + R +  L +P+ L        +VAI   +  L A  S A A  +   +     ++C LC + + +            CC SC    H+ CLA+ +L E     + IP  G CP   C  HL+W++L+
Sbjct:   70 MVMIVHGFPNKIVALQFEWAWQQPTLSTRLKI-FDDLKRKLPRETHFDYNFRIVNRMLGVGPWHRLPLTVRWLETDYQREFQ-LPVPRQLRIVSG---KVAITASQRSLAAKRSAAAAGATASWS-----SECHLCMQRIEQPERSRFGCLNASCCLSC----HMLCLASYLLGED--PGQYIPIVGNCPL--CETHLIWAELL 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKZ6_ECTSI2.950e-5271.77Endo/excinuclease amino terminal domain-containing... [more]
A0A836CE53_9STRA4.840e-2245.22GIY-YIG domain-containing protein n=1 Tax=Tribonem... [more]
UPI000719E56F1.030e-1630.48structure-specific endonuclease subunit slx1-like ... [more]
UPI000626E17A9.130e-1632.83structure-specific endonuclease subunit slx1 n=1 T... [more]
A0A1D1W0M2_RAMVA2.510e-1429.90Structure-specific endonuclease subunit SLX1 homol... [more]
A0A7S0IFD8_MICPS5.650e-1430.77Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A8H6SGZ9_MYCCL5.820e-1429.67Structure-specific endonuclease subunit SLX1 n=1 T... [more]
A0A0D2PGU1_HYPSF1.640e-1330.91Structure-specific endonuclease subunit SLX1 n=1 T... [more]
A0A0C2YVX3_HEBCY5.580e-1328.57Structure-specific endonuclease subunit SLX1 n=1 T... [more]
UPI0011BF86203.720e-1232.84structure-specific endonuclease subunit SLX1 homol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 128..197
e-value: 6.1E-12
score: 47.3
NoneNo IPR availablePANTHERPTHR20208FAMILY NOT NAMEDcoord: 1..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48333contigH-elongata_contig48333:1695..2531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48333.11983.1mRNA_H-elongata_contig48333.11983.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48333 1668..2531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48333.11983.1 ID=prot_H-elongata_contig48333.11983.1|Name=mRNA_H-elongata_contig48333.11983.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAK
LRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEV
AIGGREGLPAYASLAEAPNSGFEALRVPGTKCSLCARLLYRGSMVLCCQS
CGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD