mRNA_H-elongata_contig48333.11983.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig48333.11983.1
Unique NamemRNA_H-elongata_contig48333.11983.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: D8LKZ6_ECTSI (Endo/excinuclease amino terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ6_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 2.610e-59
Identity = 95/133 (71.43%), Postives = 111/133 (83.46%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNSGFEA 399
            +T++KRPWDMVAIVHGFPSKSSALQFE+AWQHPQ+DRRIKVKV DLPV+SRRT+GV  KLRLCKAMLCLDPWARYGLGIR LRE++A +Y+ L+LPQPLP  G P TE++ G +EGLP Y S   +     EA
Sbjct:   52 RTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVPDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYSKLNLPQPLPVKGDPDTELSTGAQEGLPVYKSPPGSQEERLEA 184
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: SLX1_MOUSE (Structure-specific endonuclease subunit SLX1 n=22 Tax=Tetrapoda TaxID=32523 RepID=SLX1_MOUSE)

HSP 1 Score: 119 bits (298), Expect = 1.980e-29
Identity = 82/209 (39.23%), Postives = 102/209 (48.80%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNSGFEALRVPGTK--CSLCARLLYRGSMVLCCQSCGVP--AHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLV 615
            +T  + PWDMV I+HGFPS  +AL+FE AWQHPQ  RR+      +    R     A  LR+   ML + PW R  L +R LR  F           P PPA   H  +A G     P          +  E     GTK  CSLCARLL      LCC   G P  AH+ CLA   L+E  +  +++P EG+CP  SC + LLW  LV
Sbjct:   53 RTSGRGPWDMVLIIHGFPSAVAALRFEWAWQHPQASRRLT----HVGPRLRSEAAFAFHLRVLAHMLRVPPWVRLPLTLRWLRPDFRHELC------PAPPA---HMPIAFGPPPPQPLVPKRPAVSEADSERQLDLGTKARCSLCARLLQDEEGPLCCPHPGCPLRAHIICLAEEFLQE--EPGQLLPLEGHCP--SCKKSLLWGNLV 244
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: UPI000B4F1E1A (structure-specific endonuclease subunit SLX1 n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4F1E1A)

HSP 1 Score: 118 bits (295), Expect = 5.490e-29
Identity = 80/209 (38.28%), Postives = 102/209 (48.80%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNSGFEALRVPG--TKCSLCARLLYRGSMVLCCQ--SCGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLV 615
            +T  + PWDMV I+HGFPS  +AL+FE AWQHPQ  RR+      +    R     A  LR+   ML   PWAR  L +R LR  F R          L PA  PH  +A G     P+         +  E    PG  + CSLCAR L      LCC    C + AH+ CLA   L+E  +  +++P EG CP  SC + +LW  LV
Sbjct:   53 RTSGRGPWDMVLILHGFPSAVAALRFEWAWQHPQASRRLT----HVGPRLRGEAAFAFHLRVLAHMLRAPPWARLPLTVRWLRPDFRRD---------LCPAPPPHMPIAFGPPPARPSVQKRLAVREADDEPQPDPGAPSSCSLCARALQDEEGPLCCPHPGCTLRAHIICLAEEFLQE--EPGQLLPLEGRCP--SCRKSVLWGHLV 244
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A8J6L047_MICOH (Structure-specific endonuclease subunit SLX1 n=1 Tax=Microtus ochrogaster TaxID=79684 RepID=A0A8J6L047_MICOH)

HSP 1 Score: 121 bits (303), Expect = 5.890e-29
Identity = 82/209 (39.23%), Postives = 104/209 (49.76%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNSGFEALRVPGTK--CSLCARLLYRGSMVLCCQSCGVP--AHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLV 615
            +T  + PWDMV I+HGFPS  +AL+FE AWQHPQ  RR+      +    R     A  LR+   ML + PW R  L +R LR  F       H   P+PP   PH  +A G     P       A  +  E     G K  C LCAR+L      LCC   G P  AH+ CLAA  LRE  +  +++P EG+CP  SC + LLW  L+
Sbjct:   53 RTSGRGPWDMVLILHGFPSAVAALRFEWAWQHPQASRRLT----HVGPRLRSEASFAFHLRVLAHMLRVPPWVRLPLTLRWLRPDFR------HELSPVPP---PHMPIAFGPVPPQPLVPKRLTASETDSERQLDGGAKGSCMLCARMLQDEEGPLCCPHPGCPLRAHIICLAAEFLRE--EPGQLLPLEGHCP--SCKKSLLWGSLI 244
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A2K6F1T1_PROCO (Structure-specific endonuclease subunit SLX1 n=4 Tax=Lemuriformes TaxID=376915 RepID=A0A2K6F1T1_PROCO)

HSP 1 Score: 117 bits (294), Expect = 8.240e-29
Identity = 84/210 (40.00%), Postives = 106/210 (50.48%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNSGFEALRVPGTK---CSLCARLLYRGSMVLCCQSCGVP--AHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLV 615
            +T  + PW+MV IVHGFPS  +AL+FE AWQHPQ  RR+    R L  E+      A  LR+   ML + PWAR  L +R LR  F +    L LP P      PH  +A G      +      +P +  E    PGT    C+LCA LL      LCC   G P  AHV CLA   LRE  +  +++P EG CP  SC   +LW  L+
Sbjct:   56 RTSGRGPWEMVLIVHGFPSAVAALRFEWAWQHPQASRRLAHVGRRLRGEA----AFAFHLRVLAHMLRVPPWARLPLTLRWLRPDFRQD---LCLPPP------PHVPLAFGPPPPRGSVPRCHTSPCADTEPELDPGTAEACCTLCAHLLQDEEHPLCCPHPGCPLRAHVICLAEEFLRE--EPGQLLPLEGQCP--SCENSVLWGDLI 248
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: UPI001485D895 (structure-specific endonuclease subunit SLX1 isoform X1 n=3 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI001485D895)

HSP 1 Score: 118 bits (296), Expect = 1.530e-28
Identity = 78/209 (37.32%), Postives = 103/209 (49.28%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNSGFEALRVPGTK--CSLCARLLYRGSMVLCCQ--SCGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLV 615
            +T  + PWDMV I+HGFPS  +AL+FE AWQHPQ  RR+      +    R     A  LR+   ML + PW R  L +R LR  F            L PA  PH  +A G     P  +    A  +  +     G K  C+LCAR+L      LCC    C + AH+ CLA   L+E  +  +++P EG+CP  SC + LLW  LV
Sbjct:  121 RTSGRGPWDMVLIIHGFPSAVAALRFEWAWQHPQASRRLT----HVGPRLRSEAAFAFHLRVLAHMLRIPPWVRLPLTLRWLRPDFRHE---------LCPAPPPHMPIAFGPPPPQPLVSKRPTASEADSQQQLELGAKNSCTLCARMLQDEEGPLCCPHPGCSLRAHIICLAEEFLQE--EPGQLLPLEGHCP--SCKKSLLWGNLV 312
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A836CE53_9STRA (GIY-YIG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE53_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.740e-28
Identity = 58/124 (46.77%), Postives = 74/124 (59.68%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQP--LPPAGAPHTEVAIGGREGLPAYAS 366
            +TR KRPW M  +V GFPSKS+ALQFE AWQHP +DR +K KV  L ++ R + G+ AKL +CKA++CL+PW RYGLG        A  + A  LP    L P         +G  + L  YAS
Sbjct:   28 RTRMKRPWQMALVVTGFPSKSAALQFEWAWQHPYKDRHVKGKVGALALKGRGSYGLKAKLAICKALMCLEPWCRYGLGTHFADNDIAAVFRAAALPDSDALQPRALDDAPRCVGPLDALAVYAS 151
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: A0A2Z5TRH2_9NEOP (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Reticulitermes speratus TaxID=60591 RepID=A0A2Z5TRH2_9NEOP)

HSP 1 Score: 115 bits (287), Expect = 7.300e-28
Identity = 79/210 (37.62%), Postives = 110/210 (52.38%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAK--LRLCKAMLCLDPWARYGLGIRLLREKFARTYAA-LHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNSGFEALRVPGTKCSLCARLLYRGSMVLCCQ-SCGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLVR 618
            +T ++ PW+MV I+HGFPS  SAL+FE AWQHPQ+ RR+K       V+ +RT        LR+   ML + PW R  L I  L+++FAR +   L  P  +P A  P      G  +G  +  S+ +           P   CSLC  ++     + C    C + AHV CLA R L+   K + IIP EG+CP  +C  H+LW+ LVR
Sbjct:   54 RTSKRGPWEMVLIIHGFPSDISALRFEWAWQHPQRSRRLK------HVQKKRTHEKMYDFCLRILSEMLRVGPWNRLALTICWLKQEFAREFPTDLCPPLHMPIAYGPVVIKKTGRAQGTASQTSVQDDD---------PLCVCSLCYEVVQPSEKITCLSPGCLLVAHVICLAKRFLK---KGNFIIPIEGHCP--ACNTHVLWADLVR 243
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: UPI00189E60DA (structure-specific endonuclease subunit SLX1 n=1 Tax=Choloepus didactylus TaxID=27675 RepID=UPI00189E60DA)

HSP 1 Score: 114 bits (286), Expect = 1.190e-27
Identity = 81/208 (38.94%), Postives = 104/208 (50.00%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAE-APNSGFEALRVPGTKCSLCARLLYRGSMVLCCQ--SCGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLV 615
            +T  + PW+MV +VHGFPS  +AL+FE AWQHPQ  RR+      +   +R     A  LR+   ML   PWAR  L +R LR  F R         P PP   PH  +A G      A A   +  P++G EA R     C+LC R L      LCC   SC + AHV CLA   L+E  +  +++P EG CP   C   LLW  L+
Sbjct:   56 RTSGRGPWEMVLLVHGFPSAVAALRFEWAWQHPQASRRLM----HVGPRTRGEASFAFHLRVLAHMLRAPPWARLPLTLRWLRPDFRRDLC------PPPP---PHVPLAFGPPPPRRALAPRRQDLPSAGTEAER-----CTLCTRALQDEEGPLCCPHPSCPLRAHVICLAEEFLQE--EPGQLLPLEGQCP--GCKNSLLWGDLI 241
[Close]
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Match: SLX1_BOVIN (Structure-specific endonuclease subunit SLX1 n=13 Tax=Pecora TaxID=35500 RepID=SLX1_BOVIN)

HSP 1 Score: 114 bits (285), Expect = 1.540e-27
Identity = 79/209 (37.80%), Postives = 100/209 (47.85%), Query Frame = 1 
Query:    1 QTRQKRPWDMVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAKLRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEVAIGGREGLPAYASLAEAPNS--GFEALRVPGTKCSLCARLLYRGSMVLCCQ--SCGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLV 615
            +T  + PW+MV IVHGFPS  +AL+FE AWQHPQ  RR+    R L  E+      A  LR+   ML   PW R  L +R LR  F          Q L P   PH  +A G              P+   GFE  +    +C+LCAR L      LCC    C + AHV CLA   L+E  +  +++P EG CP   C   LLW  L+
Sbjct:   49 RTSGRGPWEMVLIVHGFPSAVAALRFEWAWQHPQASRRLTHVGRRLRGEA----TFAFHLRVLAHMLRAPPWVRLPLTLRWLRADFR---------QDLCPPPPPHMPLAFGPXXXXXXXPRSQAGPSDDMGFEPQQDVDVRCTLCARALQDEESPLCCPHPGCSLRAHVICLAEEFLQE--EPGQLLPLEGACP--GCKNSLLWGDLI 240
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48333.11983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKZ6_ECTSI2.610e-5971.43Endo/excinuclease amino terminal domain-containing... [more]
SLX1_MOUSE1.980e-2939.23Structure-specific endonuclease subunit SLX1 n=22 ... [more]
UPI000B4F1E1A5.490e-2938.28structure-specific endonuclease subunit SLX1 n=1 T... [more]
A0A8J6L047_MICOH5.890e-2939.23Structure-specific endonuclease subunit SLX1 n=1 T... [more]
A0A2K6F1T1_PROCO8.240e-2940.00Structure-specific endonuclease subunit SLX1 n=4 T... [more]
UPI001485D8951.530e-2837.32structure-specific endonuclease subunit SLX1 isofo... [more]
A0A836CE53_9STRA1.740e-2846.77GIY-YIG domain-containing protein n=1 Tax=Tribonem... [more]
A0A2Z5TRH2_9NEOP7.300e-2837.62Structure-specific endonuclease subunit SLX1 homol... [more]
UPI00189E60DA1.190e-2738.94structure-specific endonuclease subunit SLX1 n=1 T... [more]
SLX1_BOVIN1.540e-2737.80Structure-specific endonuclease subunit SLX1 n=13 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48333contigH-elongata_contig48333:1668..2531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.3
Seed ortholog evalue1.1e-43
Seed eggNOG ortholog2880.D8LKZ6
KEGG koko:K15078
KEGG Pathwayko03460,map03460
GOsGO:0000228,GO:0000723,GO:0001325,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008821,GO:0009893,GO:0009987,GO:0010604,GO:0010638,GO:0016043,GO:0016787,GO:0016788,GO:0016888,GO:0016889,GO:0016893,GO:0016894,GO:0017108,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032206,GO:0032991,GO:0033043,GO:0033044,GO:0033557,GO:0034641,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045935,GO:0046483,GO:0048256,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051276,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090656,GO:0090737,GO:0140097,GO:1901360,GO:1904429,GO:1904431,GO:2001252
EggNOG free text desc.5'-flap endonuclease activity
EggNOG OGsKOG3005@1,KOG3005@2759
Ec32 ortholog descriptionGIY-YIG nuclease superfamily
Ec32 orthologEc-11_006130.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons2
Model size618
Cds size591
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48333.11983.1prot_H-elongata_contig48333.11983.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig48333 1695..2531 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930796.4196534-UTR-H-elongata_contig48333:1667..16941622930796.4196534-UTR-H-elongata_contig48333:1667..1694Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48333 1668..1694 +
1691679574.0665123-UTR-H-elongata_contig48333:1667..16941691679574.0665123-UTR-H-elongata_contig48333:1667..1694Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48333 1668..1694 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930796.4336052-CDS-H-elongata_contig48333:1694..18881622930796.4336052-CDS-H-elongata_contig48333:1694..1888Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48333 1695..1888 +
1691679574.0771377-CDS-H-elongata_contig48333:1694..18881691679574.0771377-CDS-H-elongata_contig48333:1694..1888Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48333 1695..1888 +
1622930796.4533756-CDS-H-elongata_contig48333:2134..25311622930796.4533756-CDS-H-elongata_contig48333:2134..2531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48333 2135..2531 +
1691679574.0850065-CDS-H-elongata_contig48333:2134..25311691679574.0850065-CDS-H-elongata_contig48333:2134..2531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48333 2135..2531 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig48333.11983.1

>prot_H-elongata_contig48333.11983.1 ID=prot_H-elongata_contig48333.11983.1|Name=mRNA_H-elongata_contig48333.11983.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
MVAIVHGFPSKSSALQFESAWQHPQQDRRIKVKVRDLPVESRRTIGVAAK
LRLCKAMLCLDPWARYGLGIRLLREKFARTYAALHLPQPLPPAGAPHTEV
AIGGREGLPAYASLAEAPNSGFEALRVPGTKCSLCARLLYRGSMVLCCQS
CGVPAHVRCLAARMLRESGKSSEIIPSEGYCPRPSCGRHLLWSQLVR
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mRNA from alignment at H-elongata_contig48333:1668..2531+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig48333.11983.1 ID=mRNA_H-elongata_contig48333.11983.1|Name=mRNA_H-elongata_contig48333.11983.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=864bp|location=Sequence derived from alignment at H-elongata_contig48333:1668..2531+ (Himanthalia elongata Himel1 dioecious)
CAGACCCGGCAGAAGCGGCCGTGGGACATGGTGGCCATTGTCCACGGCTT
CCCTTCCAAATCGTCGGCGCTCCAGTTCGAGTCGGCTTGGCAGCATCCGC
AGCAAGATCGTCGCATCAAGGTCAAAGTGCGCGACCTGCCCGTGGAGTCG
CGACGTACGATAGGGGTGGCGGCCAAGCTCCGTCTTTGTAAAGCCATGCT
CTGCCTCGACCCTTGGGCAAGGTGGGCTCTACCTCTGACTCGCCGAGCAC
TGTCGAAAGCATTGTTGTCCCTCGGTACCGCGAAGAGACTTGCGGTCCTT
GTGTTCAAAGCACTGTGTTGAATCGTTTCAATATTCTTCCGTTTTGAGGG
TCTAGACTATTCGGTGACGTCACGAACCCTTCCTCGAGAAACTATATTGC
CCCGATCTACGCTGTATGATTGGTTGAAAAATATTCTGCCGTCCACGTCC
AAAACTTTTCCTTGAAGGTACGGGCTAGGCATACGATTATTGAGGGAGAA
ATTTGCAAGGACTTACGCCGCGCTACATTTACCACAGCCTCTGCCACCTG
CGGGTGCACCTCACACCGAAGTCGCCATCGGCGGTCGAGAGGGCTTACCC
GCTTATGCCTCTCTCGCGGAGGCGCCTAACAGTGGCTTCGAGGCGCTGCG
GGTGCCCGGCACCAAGTGCAGCCTATGCGCGAGGCTTCTATATCGAGGGT
CAATGGTGCTGTGCTGCCAAAGCTGCGGGGTGCCTGCCCACGTCCGGTGC
CTTGCGGCGAGGATGCTCCGGGAGTCGGGCAAATCGTCGGAAATTATCCC
TTCGGAGGGTTACTGTCCAAGGCCTTCTTGCGGCCGGCATCTCTTATGGT
CTCAGCTCGTGAGA
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Coding sequence (CDS) from alignment at H-elongata_contig48333:1668..2531+

>mRNA_H-elongata_contig48333.11983.1 ID=mRNA_H-elongata_contig48333.11983.1|Name=mRNA_H-elongata_contig48333.11983.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig48333:1668..2531+ (Himanthalia elongata Himel1 dioecious)
ATGGTGGCCATTGTCCACGGCTTCCCTTCCAAATCGTCGGCGCTCCAGTT
CGAGTCGGCTTGGCAGCATCCGCAGCAAGATCGTCGCATCAAGGTCAAAG
TGCGCGACCTGCCCGTGGAGTCGCGACGTACGATAGGGGTGGCGGCCAAG
CTCCGTCTTTGTAAAGCCATGCTCTGCCTCGACCCTTGGGCAAGATGGTG
GCCATTGTCCACGGCTTCCCTTCCAAATCGTCGGCGCTCCAGTTCGAGTC
GGCTTGGCAGCATCCGCAGCAAGATCGTCGCATCAAGGTCAAAGTGCGCG
ACCTGCCCGTGGAGTCGCGACGTACGATAGGGGTGGCGGCCAAGCTCCGT
CTTTGTAAAGCCATGCTCTGCCTCGACCCTTGGGCAAGGTACGGGCTAGG
CATACGATTATTGAGGGAGAAATTTGCAAGGACTTACGCCGCGCTACATT
TACCACAGCCTCTGCCACCTGCGGGTGCACCTCACACCGAAGTCGCCATC
GGCGGTCGAGAGGGCTTACCCGCTTATGCCTCTCTCGCGGAGGCGCCTAA
CAGTGGCTTCGAGGCGCTGCGGGTGCCCGGCACCAAGTGCAGCCTATGCG
CGAGGCTTCTATATCGAGGGTCAATGGTGCTGTGCTGCCAAAGCTGCGGG
GTGCCTGCCCACGTCCGGTGCCTTGCGGCGAGGATGCTCCGGGAGTCGGG
CAAATCGTCGGAAATTATCCCTTCGGAGGGTTACTGTCCAAGGCCTTCTT
GCGGCCGGCATCTCTTATGGTCTCAGCTCGTGAGAGTACGGGCTAGGCAT
ACGATTATTGAGGGAGAAATTTGCAAGGACTTACGCCGCGCTACATTTAC
CACAGCCTCTGCCACCTGCGGGTGCACCTCACACCGAAGTCGCCATCGGC
GGTCGAGAGGGCTTACCCGCTTATGCCTCTCTCGCGGAGGCGCCTAACAG
TGGCTTCGAGGCGCTGCGGGTGCCCGGCACCAAGTGCAGCCTATGCGCGA
GGCTTCTATATCGAGGGTCAATGGTGCTGTGCTGCCAAAGCTGCGGGGTG
CCTGCCCACGTCCGGTGCCTTGCGGCGAGGATGCTCCGGGAGTCGGGCAA
ATCGTCGGAAATTATCCCTTCGGAGGGTTACTGTCCAAGGCCTTCTTGCG
GCCGGCATCTCTTATGGTCTCAGCTCGTGAGA
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