mRNA_H-elongata_contig48143.11956.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: UPI001F373689 (DDE-type integrase/transposase/recombinase n=4 Tax=Terrabacteria group TaxID=1783272 RepID=UPI001F373689) HSP 1 Score: 192 bits (488), Expect = 4.370e-51 Identity = 124/346 (35.84%), Postives = 190/346 (54.91%), Query Frame = 1
Query: 1 WRKAEETEMRGMVENCVYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVE----RLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDV--KKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREATTTM------TQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
W++A ++E+ + N V++ V P+ + K +YKRK G+D KVE +K RLVA+G+ + EG+ Y E +SP SIR+L A A D E+ D + AF+ +DE +Y+ PE + G E +L K+IYG Q R WN KF + + GF+Q + CV++KG +G A V+ D+IL D M L +F++KD+ +A Y + + R+RK L + Q +E ++ K+++ K+ +P+ GV L + P+ PEE E MR+ PY A ++ T+PDI AV V+R+ NPGP H AV I +YL R KD+ +TY
Sbjct: 723 WQQAMKSELDSLYSNQVWELVDAPEGIKPIGCKWIYKRKRGVDGKVETFKARLVAKGYTQKEGIDYEETFSPVAMLKSIRILLAIACHYDYEIWQMDVKTAFLNGSLDECIYMMQPEGF--IAGGQENMVCKLKKSIYGLKQASRAWNIKFNQAVKSFGFDQNIDEPCVYKKG-SGNAVAFLVLYVDDILLIGNDVGMMSSTKVWLSSQFQMKDLGEASYVLGIKLLRDRKNKMLALSQSSYIEKILVKYNMHDSKKGLLPSRHGV-PLSRNQCPKTPEEIESMRRVPYASAVGSLMYAMLCTRPDICFAVGMVSRYQSNPGPMHWTAVKHIFKYLRRTKDYMLTY 1064
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 182 bits (463), Expect = 9.360e-48 Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 1
Query: 1 WRKAEETEMRGMVENCVYKQV-ARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
W +A E G + + V P+ + V +K + K + K++ +K RLVA+GF ++ V Y SP PS+ASI+++ A A K L H+D ++A+ A +DE++++++P + + +AIYG Q GR W + GFEQ KAD CVFRK V+ ++ V+ D+IL D+ + A L KKF K++ + +++ I R+ + L+I Q ++SMVE+FDVK S+IP T G K ++ EE ++P REA +T ++PD++ AVRAVAR P H +A+ KI+ YL +D GITY
Sbjct: 752 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1084
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 182 bits (463), Expect = 9.950e-48 Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 1
Query: 1 WRKAEETEMRGMVENCVYKQV-ARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
W +A E G + + V P+ + V +K + K + K++ +K RLVA+GF ++ V Y SP PS+ASI+++ A A K L H+D ++A+ A +DE++++++P + + +AIYG Q GR W + GFEQ KAD CVFRK V+ ++ V+ D+IL D+ + A L KKF K++ + +++ I R+ + L+I Q ++SMVE+FDVK S+IP T G K ++ EE ++P REA +T ++PD++ AVRAVAR P H +A+ KI+ YL +D GITY
Sbjct: 1131 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1463
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 182 bits (463), Expect = 1.000e-47 Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 1
Query: 1 WRKAEETEMRGMVENCVYKQV-ARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
W +A E G + + V P+ + V +K + K + K++ +K RLVA+GF ++ V Y SP PS+ASI+++ A A K L H+D ++A+ A +DE++++++P + + +AIYG Q GR W + GFEQ KAD CVFRK V+ ++ V+ D+IL D+ + A L KKF K++ + +++ I R+ + L+I Q ++SMVE+FDVK S+IP T G K ++ EE ++P REA +T ++PD++ AVRAVAR P H +A+ KI+ YL +D GITY
Sbjct: 1151 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1483
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 182 bits (463), Expect = 1.010e-47 Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 1
Query: 1 WRKAEETEMRGMVENCVYKQV-ARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
W +A E G + + V P+ + V +K + K + K++ +K RLVA+GF ++ V Y SP PS+ASI+++ A A K L H+D ++A+ A +DE++++++P + + +AIYG Q GR W + GFEQ KAD CVFRK V+ ++ V+ D+IL D+ + A L KKF K++ + +++ I R+ + L+I Q ++SMVE+FDVK S+IP T G K ++ EE ++P REA +T ++PD++ AVRAVAR P H +A+ KI+ YL +D GITY
Sbjct: 1294 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1626
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 181 bits (459), Expect = 1.150e-47 Identity = 114/341 (33.43%), Postives = 183/341 (53.67%), Query Frame = 1
Query: 1 WRKAEETEMRGMVENCVYKQV-ARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
W +A E G + + V P+ + V +K + K + K++ +K RLVA+GF ++ V Y SP PS+ASI+++ A A K L H+D ++A+ A +DE++++++P + + +AIYG Q GR W + GFEQ KAD CVFRK V+ ++ V+ D+IL D+ + A L KKF K++++ +++ I R+ + L+I Q ++SMV++FDV+ S+IP + GV K D+ + E +P REA +T ++PD++ AVRAVAR P H +A+ KI+ YL +D GITY
Sbjct: 306 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 638
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 182 bits (462), Expect = 1.330e-47 Identity = 111/337 (32.94%), Postives = 191/337 (56.68%), Query Frame = 1
Query: 1 WRKAEETEMRGMVENCVYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDN-ILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEE--KEEMRKFPYREATTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
WRKA E E+ + V+++V RP+D+ ++ +K ++K K G D +VEKYK RLVAQGF +VEG+ Y E ++P + SIR+L A AA D E+ D + AF+ +++E++Y+++P ++ AV RL KA+YG Q R W K ++ +GF + +AD CVF K ++ ++ V DN +L+ + D T + ++LG +F + D+ + + ++ +TRNR+ +++ Q +E ++E+ + E K P + + + LK ++ PE KE R T+ DIA+AV ++R + PG H AV ++ +YL + + Y
Sbjct: 1010 WRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAVYVDDNMVLSDSLDLVTKTK--SDLGSRFDMTDLGEVCWILNMEVTRNRQERTIRLSQSQYIEDILERHGMA-ECK-PVHTPMDSKLKLEKLHAPEVNVKEYQRLIGSLMYAAIATRFDIATAVGMLSRHSQAPGKEHHIAVKRVFRYLRGASESDVLY 1342
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF) HSP 1 Score: 180 bits (457), Expect = 5.930e-47 Identity = 117/344 (34.01%), Postives = 188/344 (54.65%), Query Frame = 1
Query: 1 WRKAEETEMRGMVENCVYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEY--QKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVK--KESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREATTTM------TQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
W A + EM M N V+ V P + K +YKRK GLD KV+ +K RLVA+G+ ++EG+ Y E +SP SIR+L A AA D E+ D + AF+ ++ E +Y++ PE + + V +LN++IYG Q R WN +F + + GF Q + CV++K ++G V V+ D+IL K + L K+F +KD+ +A + + + R+RK+ L + Q +++++ +F ++ K+ +P G+ L K P+ +E EEM+ PY A ++ T+PDI+ AV VAR+ NPG H AV I++YL R K++ + Y
Sbjct: 807 WNVAMKAEMGSMDSNQVWDLVELPDGVRPIGCKWIYKRKRGLDGKVQTFKARLVAKGYTQIEGIDYDETFSPVAMLKSIRILLAVAAHMDYEVWQMDVKTAFLNGNLQEDIYMQQPEGFIAEGREHLVCKLNRSIYGLKQASRSWNIRFDEVIQSYGFTQCPDEHCVYKK-ISGSVVVFLVLYVDDILLIGNSKKELSDVKVWLSKQFDMKDLGEAGHILGIRLIRDRKKRMLCLSQSSYIDTVLARFSMQDSKKGMLPFRHGI-PLSKEMSPKTSKEIEEMKTVPYASAVGSLMYAMLCTRPDISYAVGMVARYQSNPGREHWSAVKHILKYLRRTKEYMLVY 1148
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: UPI001378C744 (hypothetical protein n=1 Tax=Weizmannia coagulans TaxID=1398 RepID=UPI001378C744) HSP 1 Score: 169 bits (429), Expect = 4.060e-46 Identity = 115/343 (33.53%), Postives = 183/343 (53.35%), Query Frame = 1
Query: 10 AEETEMRGMVENCVYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEY--QKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVG--VVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESK--IPTTSGVLTLLKADEPRNPEEKEEMRKFPYREATTTM------TQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
A ++E+ M N V+ V P V K +YKRK G+D KVE +K RLVA+G+ + EG+ Y E +SP SIR+L + AA D E+ D + AF+ +++E++Y+ PE + + V +L ++IYG Q R WN +F + + GFEQ + CV+++ KVV V+ D+IL D M L +F +KD+ +A + + + R+RK L + Q ++ ++E F ++ K +P GV L P+ EE+ MR+ PY A ++ T+PDI +V V+R+ NPGP H +AV I++YL R +D+ + Y
Sbjct: 1 AMKSELDSMYSNHVWDLVKAPNGIKPVDCKWVYKRKRGIDGKVETFKARLVAKGYTQKEGIDYDETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNLEEEIYMMQPEGFIAKNQEHMVCKLKRSIYGLKQASRSWNIRFDQAIKSFGFEQNLDEPCVYKR---HRDKVVMFLVLYVDDILLIGNDVGVMSSVKVWLSSQFDMKDLGEANFILGIKLWRDRKNKMLGLSQTGYIDKVLEWFSMQNSKKGLLPFRHGV-PLSDDQRPKTQEEENMMRQVPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGPKHWQAVKHILKYLRRTRDYMLVY 339
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 173 bits (438), Expect = 7.680e-46 Identity = 116/341 (34.02%), Postives = 174/341 (51.03%), Query Frame = 1
Query: 1 WRKAEETEMRGMVENCVYKQV-ARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFWKVEGVHYIEKYSPTPSTASIRMLFATAAAKDGELRHFDAERAFVKADIDEKLYIEIPEEYQKFPGAVERLNKAIYGFVQMGRCWNNKFCGDMTAIGFEQGKADLCVFRKGVNGEAKVVGVVQGDNILTHAEDKATMDRFAAELGKKFKLKDMDDARYYMSYHITRNRKRSELKIDQHLNVESMVEKFDVKKESKIPTTSGVLTLLKADEPRNPEEKEEMRKFPYREA------TTTMTQPDIASAVRAVARFCENPGPAHKEAVMKIMQYLLRPKDWGITY 1002
W +A E G + + V P+ + V +K + K D K+EK+K RLVA+GF ++ V Y SP PS+ASI+++ A A K +L H+D ++AF A +DE +++ +P + V + +AIYG Q GR W + GFEQ KAD CVFRK + D IL D + A+ L K F KD+ + ++ + R+ + L+I Q ++S+V +FDV+ S IP + GV K D+ E ++P REA +T ++PDI+ AVRAVAR P H +A++KI+ YL +D GITY
Sbjct: 15 WEQAMREEFDGHLGTGTFSFVDGTPEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLAS-LNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDD-------ESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITY 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48143.11956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48143.11956.1 >prot_H-elongata_contig48143.11956.1 ID=prot_H-elongata_contig48143.11956.1|Name=mRNA_H-elongata_contig48143.11956.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=329bp MRGMVENCVYKQVARPKDKLVVVTKMLYKRKVGLDDKVEKYKCRLVAQGFback to top mRNA from alignment at H-elongata_contig48143:3104..4132+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48143.11956.1 ID=mRNA_H-elongata_contig48143.11956.1|Name=mRNA_H-elongata_contig48143.11956.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1029bp|location=Sequence derived from alignment at H-elongata_contig48143:3104..4132+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48143:3104..4132+ >mRNA_H-elongata_contig48143.11956.1 ID=mRNA_H-elongata_contig48143.11956.1|Name=mRNA_H-elongata_contig48143.11956.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1974bp|location=Sequence derived from alignment at H-elongata_contig48143:3104..4132+ (Himanthalia elongata Himel1 dioecious)back to top |