prot_H-elongata_contig47664.11903.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47664.11903.1
Unique Nameprot_H-elongata_contig47664.11903.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
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BLAST of mRNA_H-elongata_contig47664.11903.1 vs. uniprot
Match: D7FQ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ02_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 4.260e-21
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0 
Query:    1 SGGPTKQGGERTGL-LSA--SVGSMGGELRGGELERVRGRVKDLGAAIETSQSKLLQELSQVQEEFFSSFSYTPQLGAS 76
            SGG  ++ GER G  LSA  SVGS+ GELRGGELERVRGRV DLGAAIETSQSKLL+ELSQVQE+FFSSF Y   LGAS
Sbjct:   45 SGGRGEEEGERDGPGLSARVSVGSVAGELRGGELERVRGRVADLGAAIETSQSKLLRELSQVQEDFFSSFGYATPLGAS 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47664.11903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ02_ECTSI4.260e-2175.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47664contigH-elongata_contig47664:3133..3631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47664.11903.1mRNA_H-elongata_contig47664.11903.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47664 3133..3631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47664.11903.1 ID=prot_H-elongata_contig47664.11903.1|Name=mRNA_H-elongata_contig47664.11903.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
SGGPTKQGGERTGLLSASVGSMGGELRGGELERVRGRVKDLGAAIETSQS
KLLQELSQVQEEFFSSFSYTPQLGAS
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