prot_H-elongata_contig47588.11888.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47588.11888.1
Unique Nameprot_H-elongata_contig47588.11888.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length126
Homology
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.620e-11
Identity = 32/74 (43.24%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    1 MSFSMER--NVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEAKTLVVRVAALVRIFSHSAVNND 72
            ++F++++  NV+NA   L + V +C  H+L++  +W L ING+ +TG+N   + L+ R+AA+V +FSHSAVNND
Sbjct:   23 LAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNND 96          
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.720e-11
Identity = 32/74 (43.24%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    1 MSFSMER--NVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEAKTLVVRVAALVRIFSHSAVNND 72
            ++F++++  NV+NA   L + V +C  H+L++  +W L ING+ +TG+N   + L+ R+AA+V +FSHSAVNND
Sbjct:  351 LAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNND 424          
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.080e-10
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    7 RNVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEAKTLVVRVAALVRIFSHSAVNND 72
            +NV+NA   L +PV EC  H++++A+LW L I G+A T KN   K L    AALV +FSHSAVNND
Sbjct:  180 KNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPMKKL----AALVGVFSHSAVNND 241          
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 3.730e-10
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    7 RNVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEAKTLVVRVAALVRIFSHSAVNND 72
            +NV+NA   L +PV EC  H++++A+LW L I G+  T KN   K L    AALV +FSHSAVNND
Sbjct:  180 KNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPMKKL----AALVGVFSHSAVNND 241          
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.330e-9
Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    1 MSFSMER--NVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEAKTLVVRVAALVRIFSHSAVNNDAHGAQDALREIL 84
            ++F++++  NV+NA + L +PV +C  H+++TA+LW L I G  +  +N     L+ ++AALV +FSHSAVNND       L E L
Sbjct:  361 LAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDL 444          
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 4.200e-9
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    7 RNVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEAKTLVVRVAALVRIFSHSAVNND 72
            +N+INA   L + V EC  H+++TA++W L I   AK  KN    TL+ ++AA+V +FSHSAVNND
Sbjct:   20 KNIINACTALDVTVVECNCHRVNTAVVWALGI--AAKGRKNPTMGTLMKKLAAMVGVFSHSAVNND 83          
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.130e-8
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    7 RNVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEAKTLVVRVAALVRIFSHSAVNND 72
            +N+INA   L + V EC  H+L+TA++W L I G  +   N    TL+ ++AA+V +FSHSAVNND
Sbjct:  176 KNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNND 239          
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.160e-8
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    7 RNVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEAKTLVVRVAALVRIFSHSAVNND 72
            +N+INA   L + V EC  H+L+TA++W L I G  +   N    TL+ ++AA+V +FSHSAVNND
Sbjct:  371 KNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNND 434          
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 7.080e-8
Identity = 39/119 (32.77%), Postives = 67/119 (56.30%), Query Frame = 0
Query:    1 MSFSMER--NVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEAKTLVVRVAALVRIFSHSAVNNDAHGAQDALREILR-EDPAPRKDVEALAWMGDALDPLARTIEKISR 116
            ++F++++  NV+NA   L + V +C  H++++A++W L I G+A T +N++   L+ ++AALV +FS SAVNN     Q    ++ R  +   R D      MG  L  L + I +  R
Sbjct:   27 LAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNNMLKELQRLETDLHRIYELMRRNDTSQFKMMGRLL-TLKKPISEYFR 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47588.11888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KAN7_9PHAE1.620e-1143.24Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE1.720e-1143.24Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JQI6_9PHAE1.080e-1053.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZU3_9PHAE3.730e-1051.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRT6_9PHAE1.330e-940.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAS2_9PHAE4.200e-948.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTB8_9PHAE1.130e-846.97Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE1.160e-846.97Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5KDJ6_9PHAE7.080e-832.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47588contigH-elongata_contig47588:1730..2121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47588.11888.1mRNA_H-elongata_contig47588.11888.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47588 1716..2748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47588.11888.1 ID=prot_H-elongata_contig47588.11888.1|Name=mRNA_H-elongata_contig47588.11888.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
MSFSMERNVINALEQLSIPVSECATHQLSTAILWGLVINGTAKTGKNSEA
KTLVVRVAALVRIFSHSAVNNDAHGAQDALREILREDPAPRKDVEALAWM
GDALDPLARTIEKISRGTGDDGLAG*
back to top