mRNA_H-elongata_contig114400.1148.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig114400.1148.1
Unique NamemRNA_H-elongata_contig114400.1148.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 1.190e-100
Identity = 177/265 (66.79%), Postives = 200/265 (75.47%), Query Frame = 1
Query:    1 MRAVSSLLSFSALATSSAFVIQG-HAIRGSTGR---ARALRYISRA*KSSPSRV-VALRWPVPGAANGMSCTARMMSDTTTIAEAPGVEKDPAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 780
            MRAVSSL+S SALATSSAFV  G +AIR STG+   A ALR +SRA  +S  R   ALR P          T  MMSD   + E       P GELTELARLEIR+G I+EI RHPDADSLY+EKVD+G G EE PRTIVSGLV+FCE+SDLLGR+VVVLCNLKPV+MKGV SAGMLLC SN  H++V+PLCPPEGVPL ELVT +GHL SPV+AGNRAGK WK+ SKTL VDD++ A+FTGE LP  FMTS G ITSPL G IS
Sbjct:    1 MRAVSSLVSLSALATSSAFVAPGGNAIRASTGKTNAAMALRCLSRARLTSSVRPQAALRRPTAVR------TMMMMSDAA-VTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSEEAKFTGEKLPATFMTSKGPITSPLPGSIS 258          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 226 bits (577), Expect = 7.940e-71
Identity = 121/196 (61.73%), Postives = 144/196 (73.47%), Query Frame = 1
Query:  202 ARMMSDTTTIAEAPGVEKDPA---GELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 780
            A  MS   +  E      +PA   G+LTELARLE+RVG I+EI RHPDAD LY+EK+DIG      PRTIVSGLV++C ++DLL R+VV+L NLKPV+M+GV SAGM+LC SN  HT+V PL PPEG PL ELVT EGHL++PVEAGNRA K WKKV+KT+ V +  VARFT E LP  F TS G +TSPL G IS
Sbjct:   51 AMQMSTEASTEEGAAAAAEPAAPVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIGEPAG--PRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGEDGVARFTDEALPAAFATSKGVVTSPLPGNIS 244          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.120e-52
Identity = 98/178 (55.06%), Postives = 125/178 (70.22%), Query Frame = 1
Query:  247 VEKDPAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 780
            V + P GELTEL+RLEIR G ILEI+RHP+AD LY+EK+D+G    + PRTIVSGLV +  + +LLGR VVVL NLKP ++KG+ S GMLLC SN  HT VKPL PP GV L EL+T EGH ++P   GNRAGK + +V++ L   +  +A + G     PFMTS G +T+ + G IS
Sbjct:  189 VVEAPKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEA--DGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGAGEDMIATYKGI----PFMTSKGPVTTGMAGSIS 360          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 175 bits (444), Expect = 9.430e-51
Identity = 96/174 (55.17%), Postives = 120/174 (68.97%), Query Frame = 1
Query:  259 PAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 780
            PAGEL E +RLEIRVG I++++ HPDAD LY+EK+D G   E+EPRTIVSGLV + +  DLL R+VVVL NLKP +M+G+ S GMLLC SN  H++V PL PPE     EL+T EG LS P+E  NRA K + KV+K L V+D   A F G+    PF+T  G  TS + G IS
Sbjct:   79 PAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCG---EDEPRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVNDDLQATFDGK----PFLTPNGPCTSTMKGAIS 245          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 174 bits (441), Expect = 1.810e-50
Identity = 90/164 (54.88%), Postives = 114/164 (69.51%), Query Frame = 1
Query:  271 LTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSP 762
            LTEL+RLEIRVG ++E  RHPDAD+LY+EKVD+G   E+EPRTIVSGLV+F  + +L GR V+VLCNLKP +M+G+ S GMLLC SN  HT+V PL  P    +  L+T EGH ++P++AGNRA K + KV+     D   +ARF       PFMT  GA  SP
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVG---EDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTDADGIARFNAT----PFMTEAGACYSP 224          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.180e-50
Identity = 91/171 (53.22%), Postives = 117/171 (68.42%), Query Frame = 1
Query:  268 ELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS 780
            ELTEL+RLEIRVG I+E+ RHP+AD LY+EK+D+G      PRTIVSGLV FC    LL  NV+VLCNLKP ++KG+ S GM+LC ++   T+V PL PP   P+ +L+T EGHLS PVE GNRA K + K++    V++  VA + G     PF T  G +TS L+G IS
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLGEPTG--PRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNEQGVATYNGI----PFSTPNGPVTSTLIGKIS 215          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.460e-50
Identity = 89/172 (51.74%), Postives = 122/172 (70.93%), Query Frame = 1
Query:  250 EKDPAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPL 765
            E  P GE+TEL+RLEIRVG ILE+  HP  + +++EK+D+G   E+EPRTI SGL  + ++ DLL ++ +VLCNLKP  + GV S GM+LC S+ +HT+V+ + PP GV   ELVT +GHL++PV+AGNRA K +KKV+   + DD+  A FTGE     F TS+G  TSP+
Sbjct:   66 EVAPVGEMTELSRLEIRVGKILEVAVHPTKEKIFVEKIDVG---EDEPRTICSGLRDYLKEDDLLNKDCIVLCNLKPRDLDGVPSNGMVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDSGAAVFTGEPASS-FQTSSGPCTSPI 233          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 173 bits (438), Expect = 1.980e-49
Identity = 96/180 (53.33%), Postives = 119/180 (66.11%), Query Frame = 1
Query:  220 TTTIAEAPGVEKD----PAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTG 747
            T   A+AP    D    P   LTEL+RLEIRVG I+E  +HPDAD+LY+EKVD+G   EEEPRTIVSGLV +     ++GR+VVVLCNLKP +M+GV S GMLLC SN  HT V PLC P+  P+ ELVT EGH S+P++  NRA K + +V+  L  ++  VA F       PF TS G
Sbjct:   94 TVATAQAPAAVGDGDSAPDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVG---EEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEAGVAMFEDV----PFSTSAG 266          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.240e-49
Identity = 104/187 (55.61%), Postives = 123/187 (65.78%), Query Frame = 1
Query:  223 TTIAEAPGVEKDPAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLL-GPIS 780
            TT+A A      P+G+  E   LEIRVG ILEI +HP+ADSLY+EKVD+G      PRTIVSGLV FC    LL R+VVVLCNLKP + KG+ S GMLLC SN    +V+PL PP GVP  ELV+ EGH+  P E GNRA K + KVS    V D+ +A + G     PFMTS G ITS +L GPIS
Sbjct:   61 TTVAPAA----KPSGDSIEA--LEIRVGKILEIGKHPEADSLYVEKVDLGES--SGPRTIVSGLVEFCTAEYLLNRDVVVLCNLKPRAFKGINSQGMLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDSGIATYKGI----PFMTSKGPITSTILKGPIS 235          
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 171 bits (433), Expect = 5.980e-49
Identity = 103/207 (49.76%), Postives = 132/207 (63.77%), Query Frame = 1
Query:  172 PGAANGMSCTARMMS--DTTTIAEAPGVEKDPAGELTELARLEIRVGTILEITRHPDADSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSMKGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNRAGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSP--LLGPIS 780
            PGA    +   RM S  D +   E     +  +  LTEL+RLEIRVG I++  +HP+ADSLY+E+VD+G   E   R IVSGLVSF    +++ R V+VLCNLKP +M+G+ S GMLLC SN  H++V PL  PEGVP+  LVT EGH S P  AGNRA K + KV+K+L  D T VA F  E +P  F T +G   SP  L+GP+S
Sbjct:   57 PGATREGAGRMRMSSLEDGSAALETAAGNEGESLPLTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVGD--ESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTDATGVAMF--EQVP--FATPSGPCFSPKKLVGPVS 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114400.1148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI1.190e-10066.79Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA7.940e-7161.73Endothelial monocyte-activating polypeptide II pro... [more]
W7U6C4_9STRA1.120e-5255.06Endothelial monocyte-activating polypeptide ii pro... [more]
A0A7S2V4I0_9STRA9.430e-5155.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0ZE83_9RHOD1.810e-5054.88Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S0XDL6_9STRA2.180e-5053.22Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2R5F0_9STRA4.460e-5051.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2V3IUX7_9FLOR1.980e-4953.33Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A7S3M138_9STRA2.240e-4955.61Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A5J4Z2W6_PORPP5.980e-4949.76Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114400contigH-elongata_contig114400:1080..1862 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score272.3
Seed ortholog evalue1.8e-70
Seed eggNOG ortholog2880.D7FMW6
Preferred nameYARS
KEGG rclassRC00055,RC00523
KEGG koko:K01866
KEGG ReactionR02918
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000049,GO:0001664,GO:0002682,GO:0002685,GO:0002688,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004831,GO:0005102,GO:0005126,GO:0005153,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0006915,GO:0006935,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009605,GO:0009966,GO:0009987,GO:0010467,GO:0010469,GO:0010646,GO:0010758,GO:0012501,GO:0016070,GO:0016604,GO:0016874,GO:0016875,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0023051,GO:0030334,GO:0030545,GO:0031974,GO:0031981,GO:0032101,GO:0032879,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034660,GO:0040011,GO:0040012,GO:0042056,GO:0042221,GO:0042330,GO:0042379,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045236,GO:0046483,GO:0048018,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0050920,GO:0051270,GO:0051716,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1905521,GO:2000145
EggNOG free text desc.tRNA binding
EggNOG OGsCOG0143@1,KOG2241@2759
EC6.1.1.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleic acid-binding, OB-fold
Ec32 orthologEc-09_002760.1
Exons1
Model size783
Cds size594
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929660.7635612-CDS-H-elongata_contig114400:1079..16731622929660.7635612-CDS-H-elongata_contig114400:1079..1673Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig114400 1080..1673 -
1691679109.6796186-CDS-H-elongata_contig114400:1079..16731691679109.6796186-CDS-H-elongata_contig114400:1079..1673Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig114400 1080..1673 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929660.7823822-UTR-H-elongata_contig114400:1673..18621622929660.7823822-UTR-H-elongata_contig114400:1673..1862Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig114400 1674..1862 -
1691679109.6926365-UTR-H-elongata_contig114400:1673..18621691679109.6926365-UTR-H-elongata_contig114400:1673..1862Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig114400 1674..1862 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114400.1148.1prot_H-elongata_contig114400.1148.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig114400 1080..1673 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig114400.1148.1

>prot_H-elongata_contig114400.1148.1 ID=prot_H-elongata_contig114400.1148.1|Name=mRNA_H-elongata_contig114400.1148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MSCTARMMSDTTTIAEAPGVEKDPAGELTELARLEIRVGTILEITRHPDA
DSLYMEKVDIGAGVEEEPRTIVSGLVSFCEKSDLLGRNVVVLCNLKPVSM
KGVLSAGMLLCCSNGKHTEVKPLCPPEGVPLRELVTSEGHLSSPVEAGNR
AGKVWKKVSKTLEVDDTKVARFTGEMLPDPFMTSTGAITSPLLGPIS*
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mRNA from alignment at H-elongata_contig114400:1080..1862-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig114400.1148.1 ID=mRNA_H-elongata_contig114400.1148.1|Name=mRNA_H-elongata_contig114400.1148.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=783bp|location=Sequence derived from alignment at H-elongata_contig114400:1080..1862- (Himanthalia elongata Himel1 dioecious)
ATGCGAGCTGTTTCATCTCTCTTATCCTTCTCGGCACTAGCAACCTCATC GGCCTTCGTTATTCAAGGCCATGCGATTCGCGGGAGCACGGGTAGAGCTA GAGCTCTTCGATATATTTCCCGAGCTTAAAAATCGTCTCCATCACGAGTG GTTGCGCTCAGGTGGCCTGTGCCGGGGGCCGCGAATGGCATGTCTTGTAC AGCAAGAATGATGTCGGATACTACTACGATAGCAGAGGCGCCCGGGGTCG AGAAAGATCCTGCGGGAGAATTGACAGAGCTAGCTCGCCTCGAAATCCGT GTCGGCACGATTTTGGAGATTACTCGTCATCCTGATGCTGATAGTCTGTA CATGGAAAAGGTAGACATCGGAGCTGGTGTCGAAGAAGAACCGCGAACAA TCGTTTCAGGCCTGGTGAGCTTTTGCGAAAAGTCTGACCTTCTGGGGAGG AACGTCGTTGTCCTCTGCAACCTTAAACCTGTCAGCATGAAGGGAGTGTT ATCGGCGGGCATGCTACTATGTTGTAGTAACGGAAAACACACCGAAGTAA AGCCTCTCTGTCCTCCAGAGGGCGTGCCTCTTCGAGAATTGGTGACTTCC GAAGGACATTTATCATCACCGGTGGAGGCCGGCAACCGCGCGGGCAAGGT ATGGAAAAAAGTGTCCAAGACACTAGAGGTGGACGATACCAAGGTGGCGA GGTTCACGGGTGAAATGCTTCCCGATCCTTTCATGACATCTACGGGGGCC ATCACTTCTCCGCTGTTGGGGCCTATATCATGA
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Coding sequence (CDS) from alignment at H-elongata_contig114400:1080..1862-

>mRNA_H-elongata_contig114400.1148.1 ID=mRNA_H-elongata_contig114400.1148.1|Name=mRNA_H-elongata_contig114400.1148.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig114400:1080..1862- (Himanthalia elongata Himel1 dioecious)
ATGTCTTGTACAGCAAGAATGATGTCGGATACTACTACGATAGCAGAGGC
GCCCGGGGTCGAGAAAGATCCTGCGGGAGAATTGACAGAGCTAGCTCGCC
TCGAAATCCGTGTCGGCACGATTTTGGAGATTACTCGTCATCCTGATGCT
GATAGTCTGTACATGGAAAAGGTAGACATCGGAGCTGGTGTCGAAGAAGA
ACCGCGAACAATCGTTTCAGGCCTGGTGAGCTTTTGCGAAAAGTCTGACC
TTCTGGGGAGGAACGTCGTTGTCCTCTGCAACCTTAAACCTGTCAGCATG
AAGGGAGTGTTATCGGCGGGCATGCTACTATGTTGTAGTAACGGAAAACA
CACCGAAGTAAAGCCTCTCTGTCCTCCAGAGGGCGTGCCTCTTCGAGAAT
TGGTGACTTCCGAAGGACATTTATCATCACCGGTGGAGGCCGGCAACCGC
GCGGGCAAGGTATGGAAAAAAGTGTCCAAGACACTAGAGGTGGACGATAC
CAAGGTGGCGAGGTTCACGGGTGAAATGCTTCCCGATCCTTTCATGACAT
CTACGGGGGCCATCACTTCTCCGCTGTTGGGGCCTATATCATGAATGTCT
TGTACAGCAAGAATGATGTCGGATACTACTACGATAGCAGAGGCGCCCGG
GGTCGAGAAAGATCCTGCGGGAGAATTGACAGAGCTAGCTCGCCTCGAAA
TCCGTGTCGGCACGATTTTGGAGATTACTCGTCATCCTGATGCTGATAGT
CTGTACATGGAAAAGGTAGACATCGGAGCTGGTGTCGAAGAAGAACCGCG
AACAATCGTTTCAGGCCTGGTGAGCTTTTGCGAAAAGTCTGACCTTCTGG
GGAGGAACGTCGTTGTCCTCTGCAACCTTAAACCTGTCAGCATGAAGGGA
GTGTTATCGGCGGGCATGCTACTATGTTGTAGTAACGGAAAACACACCGA
AGTAAAGCCTCTCTGTCCTCCAGAGGGCGTGCCTCTTCGAGAATTGGTGA
CTTCCGAAGGACATTTATCATCACCGGTGGAGGCCGGCAACCGCGCGGGC
AAGGTATGGAAAAAAGTGTCCAAGACACTAGAGGTGGACGATACCAAGGT
GGCGAGGTTCACGGGTGAAATGCTTCCCGATCCTTTCATGACATCTACGG
GGGCCATCACTTCTCCGCTGTTGGGGCCTATATCATGA
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