mRNA_H-elongata_contig11195.974.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: D8LSH1_ECTSI (Serine/threonine protein kinase, possibly NIMA-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH1_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 2.230e-131 Identity = 193/224 (86.16%), Postives = 204/224 (91.07%), Query Frame = 1
Query: 7 QIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIYKNCLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPDTEQV 678
++IKLKNIP KEQ AC+NEVELL RMCHPNIVGYTNS +YKNCLCIIMEYCDAGDLGDRVNEAK L PES+VMTWFVQ LGLH+MH+NRVLHRDIKTQNVFILSSGRVVLGDLGISKLLG T DFASTCIGTPYYMSPEIFKN PYNDKSDVWALGCLLYELLTLKHAFDAQSLN LAGKIIKG+FP VSTQYS+NLRALVNDMLA NP+KRPD EQ+
Sbjct: 33 KVIKLKNIPPKEQEACKNEVELLSRMCHPNIVGYTNSFLYKNCLCIIMEYCDAGDLGDRVNEAKGQ----LLPESKVMTWFVQTALGLHFMHSNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGGTRDFASTCIGTPYYMSPEIFKNHPYNDKSDVWALGCLLYELLTLKHAFDAQSLNGLAGKIIKGKFPSVSTQYSKNLRALVNDMLATNPKKRPDIEQI 252
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: A0A835ZAS8_9STRA (NEK1 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS8_9STRA) HSP 1 Score: 345 bits (886), Expect = 2.790e-116 Identity = 162/224 (72.32%), Postives = 190/224 (84.82%), Query Frame = 1
Query: 7 QIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIYKNCLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPDTEQV 678
++IKLKN+P KEQ ACR+EVELL+RM HPNIVGY +S +YKNCLCIIME+CDAGDLG+RV +A LFPE+++MTWFVQI LGLH+MH NRVLHRDIKTQN+FILSSGRVVLGDLGISK++G T DFAST IGTPYYMSPEIF+N+PYN KSDVWALG +LYEL TLKHAFDAQ + SL+ KIIKG++PPV YS N + LV D+LAI+P RPD EQ+
Sbjct: 33 KVIKLKNMPKKEQEACRSEVELLKRMIHPNIVGYMDSFLYKNCLCIIMEFCDAGDLGERVTKATQQNPVALFPETKIMTWFVQIALGLHFMHKNRVLHRDIKTQNIFILSSGRVVLGDLGISKVMGGTTDFASTQIGTPYYMSPEIFQNKPYNHKSDVWALGIVLYELATLKHAFDAQCITSLSSKIIKGKYPPVDAGYSNNFKGLVKDLLAISPGARPDVEQI 256
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: A0A7S1UB12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB12_9STRA) HSP 1 Score: 315 bits (807), Expect = 2.420e-104 Identity = 149/229 (65.07%), Postives = 183/229 (79.91%), Query Frame = 1
Query: 7 QIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIYKN--CLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPDTEQVWGL 687
++IK+KNIP KE+ ACR EVELLRR+ HPNIVGY S + +N LCI+MEYCD GDL D + +A+ LFPES+V+ WFVQ+ LGLHYMH+NR+LHRD+KTQN+F+L +GR+VLGDLGISK+L T DFA TCIGTPYYMSPEIFKN+PYN KSD+WALGC+LYEL TL HAFDA SLN LA KII+G++PP+ +YSRNLR L++ ML +P RPD E + L
Sbjct: 33 KVIKVKNIPRKEREACRVEVELLRRLNHPNIVGYKESFLTRNKESLCIVMEYCDGGDLCDVIKKARRQ----LFPESKVLHWFVQMALGLHYMHSNRILHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFAQTCIGTPYYMSPEIFKNKPYNHKSDIWALGCVLYELTTLNHAFDAASLNGLASKIIRGKYPPIHPKYSRNLRNLIDSMLDKSPSARPDLEDILKL 257
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: A0A836CGE2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGE2_9STRA) HSP 1 Score: 307 bits (786), Expect = 9.450e-100 Identity = 143/226 (63.27%), Postives = 184/226 (81.42%), Query Frame = 1
Query: 7 QIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIY--KNCLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPDTEQV 678
++IK+KNIP KE+ ACR EVELL+R+ HPNIVGY S + K+CLCI MEYCD GDL +++ A+ LF ES+++ +FVQ++LGLHYMH++R+LHRD+KTQNVF+L +GRVVLGDLGISK+L T DFASTCIGTPYYMSPEIFKN+PYN KSDVWALGC+LYE+ TL HAFD+ SLN LA KI++G++PP++ +YS +LR L+ MLA +P RPD +Q+
Sbjct: 33 KVIKIKNIPRKEREACRMEVELLKRLHHPNIVGYRESFLTPRKDCLCIAMEYCDGGDLCEQIKGARR----RLFSESKILHFFVQMSLGLHYMHSHRILHRDLKTQNVFLLGNGRVVLGDLGISKVLNGTMDFASTCIGTPYYMSPEIFKNEPYNHKSDVWALGCVLYEMTTLNHAFDSNSLNGLASKIVRGKYPPINPKYSPHLRDLIASMLATSPAARPDMDQI 254
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: A0A7S2WHN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHN0_9STRA) HSP 1 Score: 307 bits (787), Expect = 2.020e-98 Identity = 143/222 (64.41%), Postives = 180/222 (81.08%), Query Frame = 1
Query: 7 QIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIYKN--CLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPD 666
+++++KN+P KE+ ACR EVELLRR+ HPNIVGY S +++N LCI+M+YCD GDL ++ AK LFPES+++ WFVQ+ LGL YMH NRVLHRD+KTQN+F+L +GR+VLGDLGISK+L T DFA TCIGTPYYMSPEIFKN+PYN KSD+WALGC+LYE+ TL HAFDA SLN LA KIIKGRFPP++ +YS++LR L++ MLA +P RPD
Sbjct: 62 KVVRIKNLPKKEREACRMEVELLRRLHHPNIVGYLGSFMHRNNESLCIVMQYCDGGDLCAQIKAAKKQ----LFPESKILHWFVQMALGLFYMHENRVLHRDLKTQNIFMLGNGRLVLGDLGISKVLEGTMDFAETCIGTPYYMSPEIFKNKPYNHKSDIWALGCVLYEMTTLNHAFDANSLNGLACKIIKGRFPPINPKYSKHLRDLISSMLATSPSSRPD 279
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: A0A7S3HJZ2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJZ2_9STRA) HSP 1 Score: 304 bits (779), Expect = 1.640e-93 Identity = 143/226 (63.27%), Postives = 182/226 (80.53%), Query Frame = 1
Query: 7 QIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIYKN--CLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPDTEQV 678
+IIK+KNIP KE+ A + EV+LLRR+ HPNIV Y +S + KN LCI MEYCD GDL ++ A+ NLF ES+++ WFVQ+TLGLHYMH N+VLHRD+KTQNVF+L +GR+VLGDLGISK+L T DFA TCIGTPYYMSPEIFKN+PY+ KSDVWALGC+LYE+ TL HAFDA SLN LA KI+KG++PP++ +YS++L L+ ML +NP++RPD +Q+
Sbjct: 35 KIIKIKNIPKKEREATKVEVDLLRRLNHPNIVRYIDSFLSKNKESLCICMEYCDGGDLASQIKAARK----NLFSESKILHWFVQLTLGLHYMHGNKVLHRDLKTQNVFMLGNGRLVLGDLGISKVLDGTMDFAQTCIGTPYYMSPEIFKNKPYSYKSDVWALGCVLYEMTTLNHAFDANSLNGLATKIVKGKYPPINPKYSKHLSELIGQMLQLNPQQRPDLDQI 256
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: A0A8J2SGK3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGK3_9STRA) HSP 1 Score: 297 bits (761), Expect = 5.040e-91 Identity = 139/226 (61.50%), Postives = 178/226 (78.76%), Query Frame = 1
Query: 7 QIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIYKN--CLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPDTEQV 678
++IK+KNIP KE+ ACR EV+L++R+ HPNIV Y +S + +N LCI+M YCD GDLG+++ +A F E++V+ WFVQ+ LGLHYMH NRVLHRD+KTQN+F+L +GR+VLGDLGISK+L T DFA TCIGTPYYMSPEIFKN+PYN KSD+WALGC+LYE TL HAFDA SLN LA KI++G++PPVS++YS++L LV MLA P +RP E +
Sbjct: 33 KVIKIKNIPKKEREACRAEVQLMKRLRHPNIVAYRDSFLARNRESLCIVMTYCDGGDLGNQITQAAKRR--RPFTEAKVLHWFVQMALGLHYMHANRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTLDFAQTCIGTPYYMSPEIFKNKPYNHKSDIWALGCVLYECATLNHAFDANSLNGLACKIVRGKYPPVSSRYSKHLSDLVGAMLATQPSQRPTLEAI 256
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: D8LPU9_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPU9_ECTSI) HSP 1 Score: 300 bits (767), Expect = 2.410e-90 Identity = 141/230 (61.30%), Postives = 181/230 (78.70%), Query Frame = 1
Query: 4 AQIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIY--KNCLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPDTEQVWGL 687
A+IIK+KNIP KE+ ACR EV+L+RR+ HPNIVGY +S + K+ LCI+MEYCD GDL ++ A+ LFPES+++ WFVQI LGLHYMH+ VLHRD+KTQN+F+L +GR+VLGDLGISK+L T DFAST IGTPYYMSPE+F N+PYN KSD+WALGC+LYE+ L HAFDA SL+ LA ++ KGR+P + +YSRNLR L++ MLA +P +RPD +Q+ L
Sbjct: 32 AKIIKIKNIPRKEREACRTEVDLMRRLHHPNIVGYKDSFLTPRKDHLCIVMEYCDGGDLSTQIKNARK----RLFPESKILHWFVQIALGLHYMHSRLVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPELFNNKPYNHKSDIWALGCVLYEMSALSHAFDATSLHGLAQRVAKGRYPSIHVKYSRNLRDLISRMLATSPSQRPDLDQILQL 257
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: A0A6H5K9D4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D4_9PHAE) HSP 1 Score: 268 bits (684), Expect = 2.330e-87 Identity = 125/207 (60.39%), Postives = 161/207 (77.78%), Query Frame = 1
Query: 73 LRRMCHPNIVGYTNSLIY--KNCLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPDTEQVWGL 687
+RR+ HPNIVGY +S + K+ LCI+MEYCD GDL ++ A+ LFPES+++ WFVQI LGLHYMH+ VLHRD+KTQN+F+L +GR+VLGDLGISK+L T DFAST IGTPYYMSPE+F N+PYN KSD+WALGC+LYE+ L HAFDA SL+ LA ++ KGR+P + +YSRNLR L++ MLA +P +RPD +Q+ L
Sbjct: 1 MRRLHHPNIVGYKDSFLTPRKDHLCIVMEYCDGGDLSTQIKNARK----RLFPESKILHWFVQIALGLHYMHSRLVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPELFDNKPYNHKSDIWALGCVLYEMSALSHAFDATSLHGLAQRVAKGRYPSIHVKYSRNLRDLISRMLATSPSQRPDLDQILQL 203
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Match: A0A5A8CUE2_CAFRO (Protein kinase domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CUE2_CAFRO) HSP 1 Score: 261 bits (668), Expect = 3.430e-79 Identity = 118/226 (52.21%), Postives = 172/226 (76.11%), Query Frame = 1
Query: 7 QIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIYK--NCLCIIMEYCDAGDLGDRVNEAKASEIDNLFPESEVMTWFVQITLGLHYMHTNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGSTHDFASTCIGTPYYMSPEIFKNQPYNDKSDVWALGCLLYELLTLKHAFDAQSLNSLAGKIIKGRFPPVSTQYSRNLRALVNDMLAINPRKRPDTEQV 678
++IK++ IP E+ AC+NEV +++R+ HPNIV Y +S + + LCI+M YCD GDL R+ + + L PE +++ WFVQI LGL MH+++VLHRD+KT N+F+LSSGR+VLGDLGISK L +T AST IGTPYYMSPE+F+++PYN KSDVWA+GC+LYEL T++H F+A+S+ L +I++GR+PP++ +YS+ LR+L++ +L+ P RPD ++V
Sbjct: 33 KVIKMRGIPKAEREACKNEVAIMQRLPHPNIVAYKDSFSVQRGDKLCIVMTYCDGGDLSARLEQQRGK----LLPEDQILHWFVQIALGLGCMHSSKVLHRDLKTANIFLLSSGRLVLGDLGISKSLDATMAMASTQIGTPYYMSPELFQSKPYNHKSDVWAIGCVLYELCTMRHPFEAESIQQLGARILRGRYPPIAARYSKGLRSLIDSLLSQAPSSRPDVDEV 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11195.974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11195.974.1 >prot_H-elongata_contig11195.974.1 ID=prot_H-elongata_contig11195.974.1|Name=mRNA_H-elongata_contig11195.974.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp HAQIIKLKNIPNKEQVACRNEVELLRRMCHPNIVGYTNSLIYKNCLCIIMback to top mRNA from alignment at H-elongata_contig11195:2148..4400+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11195.974.1 ID=mRNA_H-elongata_contig11195.974.1|Name=mRNA_H-elongata_contig11195.974.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2253bp|location=Sequence derived from alignment at H-elongata_contig11195:2148..4400+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11195:2148..4400+ >mRNA_H-elongata_contig11195.974.1 ID=mRNA_H-elongata_contig11195.974.1|Name=mRNA_H-elongata_contig11195.974.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig11195:2148..4400+ (Himanthalia elongata Himel1 dioecious)back to top |