mRNA_H-elongata_contig111459.938.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: D7FTY8_ECTSI (Putative tyrosine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY8_ECTSI) HSP 1 Score: 281 bits (720), Expect = 2.460e-85 Identity = 137/190 (72.11%), Postives = 154/190 (81.05%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLVPVAQRDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNS--MTGNCGTVQ 579
G QV+QG+WRGTPVA+KVL+P AQRDLDEELAADFRAEVLMLAALRHPNVC+FM ACM PPNRAIVTEL+++GSLWEALR +P ++ +R +D TP CWPWS++MKVAEG ACGM YLHQHEPFPI+HRDLKSANLLLD SFN KICDFGLARLKA+TNS MTGNCGTVQ
Sbjct: 867 GFGQVYQGVWRGTPVAIKVLLPAAQRDLDEELAADFRAEVLMLAALRHPNVCLFMGACMVPPNRAIVTELLTRGSLWEALRADRVPEESIACS-FRRGSDRSGTAGTSSRVLTPQECWPWSVIMKVAEGLACGMWYLHQHEPFPILHRDLKSANLLLDSSFNPKICDFGLARLKAFTNSAAMTGNCGTVQ 1055
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A6H5KM77_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM77_9PHAE) HSP 1 Score: 282 bits (721), Expect = 6.660e-85 Identity = 137/190 (72.11%), Postives = 154/190 (81.05%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLVPVAQRDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNS--MTGNCGTVQ 579
G QV+QG+WRGTPVA+KVL+P AQRDLDEELAADFRAEVLMLAALRHPNVC+FM ACM PPNRAIVTEL+++GSLWEALR +P ++ +R +D P TP CWPWS++MKVAEG ACGM YLHQHEPFPI+HRDLKSANLLLD S N KICDFGLARLKA+TNS MTGNCGTVQ
Sbjct: 1019 GFGQVYQGVWRGTPVAIKVLLPAAQRDLDEELAADFRAEVLMLAALRHPNVCLFMGACMVPPNRAIVTELLTRGSLWEALRADRVPEESIACY-FRRGSDRSCAAGPSSRILTPQECWPWSVIMKVAEGVACGMWYLHQHEPFPILHRDLKSANLLLDSSLNPKICDFGLARLKAFTNSAAMTGNCGTVQ 1207
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A835ZK37_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK37_9STRA) HSP 1 Score: 223 bits (569), Expect = 2.670e-65 Identity = 117/212 (55.19%), Postives = 137/212 (64.62%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLVPVAQ------------------------RDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
G QV++G WRGTPVA+KVL+ AQ ++D+ L ADF AEV MLAALRHPN+C+FM AC+ PP RAIVTELV++GSLW+ALR P V G G V TPP WPW +++VAEG ACGMNYLH+ P P++HRDLKSANLLLDDS VKICDFGLARLKA+T SMTGNCGT Q
Sbjct: 501 GFGQVYRGSWRGTPVAIKVLIQPAQVRARGAAINGEFECAYVCVERLRCEEMDDALVADFAAEVAMLAALRHPNICLFMGACLRPPRRAIVTELVARGSLWDALRDRAPPRVPHG-------CAGAGV-------ATPPEAWPWQAILRVAEGAACGMNYLHRASP-PVLHRDLKSANLLLDDSLAVKICDFGLARLKAFTTSMTGNCGTTQ 697
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: B8BQF7_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQF7_THAPS) HSP 1 Score: 183 bits (465), Expect = 1.240e-54 Identity = 96/189 (50.79%), Postives = 122/189 (64.55%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLVPVAQRD-LDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
G QV + W+GTPVAVKVL +AQ + + + + +F AE+ +++ RHPN+C+FM AC+ PPNRAIVTEL GSLW+ALR P +A P G WPW LV +VA GTA GM YLH EP P++HRDLKSAN+LLD+S+ K+ DFGL+RLKA + MTGNCGTVQ
Sbjct: 16 GFGQVWKAKWKGTPVAVKVLTGLAQAEAVPKAVLEEFIAEINIVSGFRHPNICLFMGACLDPPNRAIVTELCENGSLWDALRT---PLIA------------------------PAGTWPWVLVKRVASGTARGMCYLHSGEP-PVLHRDLKSANILLDESYTAKLADFGLSRLKAVRSGMTGNCGTVQ 176
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A7S1BCS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCS3_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.610e-54 Identity = 106/207 (51.21%), Postives = 136/207 (65.70%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLVPVAQRDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPN-RAIVTELVSQGSLWEALRKS----YLPSVALGMDP--------SKRLADGEAVHH-----PVESFTTPP-GCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
G QV + WRGTPVAVK+L A++ L L +F AE+ M++A+RHPN +FM AC++PP+ RAIVTEL ++GSLW+ALR+ Y+P+ + D + GE V + S+ P G WPW LV +VAEG A M+YLH P P++HRDLKSANLLLD+SF VKICDFGLARL+ + NSMTGNCGTVQ
Sbjct: 568 GFGQVWKANWRGTPVAVKILAGSAKQTLSPNLLQEFLAEISMVSAMRHPNCILFMGACVSPPHPRAIVTELAARGSLWDALRQPLPHPYVPADGMTRDAWPEALYCSGGKPTSGEDVEFGQKYVSMNSYAIPELGIWPWVLVKRVAEGAARAMSYLHSGHP-PVLHRDLKSANLLLDESFTVKICDFGLARLQQHDNSMTGNCGTVQ 773
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A7S0UFT7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFT7_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.090e-53 Identity = 99/209 (47.37%), Postives = 131/209 (62.68%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLVPVAQRD-LDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALR--------------------KSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
G QV + WRGTPVAVKVL AQ + + + +F+AE+ +L +RHPN+C++M AC+ PPNRAI+TEL + GS W++LR + YLP G+ PS +DG ++ + + P G WPW LV +V+ G A GM YLH P P++HRDLKSANLLLD+S+ K+CDFGL+RLKA SMT NCGTVQ
Sbjct: 389 GFGQVWKATWRGTPVAVKVLTGSAQNSHIAKPILEEFKAEINLLKGMRHPNICLYMGACLTPPNRAIITELAANGSAWDSLRLPLSPPYRAADGTPRGCWPLRLYLPGQH-GVPPS---SDGGSLSSGITAPIPPRGTWPWELVKRVSCGAARGMAYLHSGNP-PVLHRDLKSANLLLDESYTTKVCDFGLSRLKAQARSMTANCGTVQ 592
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A6S8IK00_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8IK00_9STRA) HSP 1 Score: 192 bits (487), Expect = 3.090e-53 Identity = 101/201 (50.25%), Postives = 129/201 (64.18%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLVPVAQ-RDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGC------------WPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
G QV + +W GTPVAVKVL AQ + + +F AE+ +L +RHPN+C++M AC+APPNRAI+TEL + GSLW+ALR L + D R A +++ P PP WPW LV KVA G+A GMNYLH +P P++HRDLKSAN+LLD+S+ K+CDFGL+RLKA SMTGNCGTVQ
Sbjct: 656 GFGQVWKAMWNGTPVAVKVLTGSAQAHQVPRAILEEFAAEINLLKGMRHPNICLYMGACLAPPNRAIITELAANGSLWDALRLP-LSAPYTACDGLTRHAWPMSLYQPDPRHGVPPSMSRTVSHVPPKSTWPWILVKKVACGSARGMNYLHSGKP-PVLHRDLKSANILLDESYTPKVCDFGLSRLKAQDRSMTGNCGTVQ 854
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A7S3QBK8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBK8_9STRA) HSP 1 Score: 191 bits (485), Expect = 8.490e-53 Identity = 100/206 (48.54%), Postives = 128/206 (62.14%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLV----PVAQRDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESF--------------TTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
G QV WRGTPVAVKVL P + + + + +F AE+ +L+ +RHPN+C+++ AC+ P NRAIVTEL + GSLW+ALR P A+ ADG P + + PP WPW+LV +VAEG A GMNYLH P ++HRDLKSAN+LLDDS+N K+CDFGL+RLKA +MTGNCGTVQ
Sbjct: 962 GFGQVWSATWRGTPVAVKVLSAITDPQTKMHVQKAILQEFAAEINLLSGMRHPNICLYIGACLEPTNRAIVTELAANGSLWDALRLPLQPPFAI------TPADGMPASWPFGLYDPHIFDRAGSGSILSPPPSTWPWALVRRVAEGAARGMNYLHCGMP-AVLHRDLKSANILLDDSYNPKVCDFGLSRLKAQEKTMTGNCGTVQ 1160
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A1Z5JP08_FISSO (Sterile alpha motif and leucine zipper containing kinase AZK n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP08_FISSO) HSP 1 Score: 188 bits (477), Expect = 5.380e-52 Identity = 100/201 (49.75%), Postives = 127/201 (63.18%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLVPVAQ-RDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSY-LPSVALG-----------MDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
G QV + WRGTPVAVK+L AQ + + + +F AE+ +L ++HPN+C++M AC+ PPNRAIVTEL + GSLW+ALR P A +P R + +P + P WPW LV KVA G A GM YLH +P PI+HRDLKSAN+LLD+S+N K+CDFGL+RLKA SMTGNCGTVQ
Sbjct: 573 GFGQVWKAKWRGTPVAVKILTGSAQSKHVPRAVLEEFAAEINLLKGMQHPNICLYMGACVVPPNRAIVTELAAHGSLWDALRLPLDSPFTACDGVSHNGWPTSLFEPDPRHGTPPSHRYPNQPPVPPKYQWPWVLVKKVAVGVARGMAYLHGGDP-PILHRDLKSANILLDESYNPKVCDFGLSRLKAQERSMTGNCGTVQ 772
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: K0TI28_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TI28_THAOC) HSP 1 Score: 186 bits (473), Expect = 2.690e-51 Identity = 98/205 (47.80%), Postives = 129/205 (62.93%), Query Frame = 1
Query: 16 GTWQVHQGIWRGTPVAVKVLVPVAQRD-LDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSK--------RLADGEAVHH--------PVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
G QV W+GTPVAVKVL AQ + + + + +F AE+ +++ +RHPN+C+FM AC+ PPNRAIVTEL GSLW+ALR S + S+ LA ++H P E P G WPW+LV +V+ G A GM YLH +P P++HRDLKSAN+LLD+S+ K+ DFGL+RLKA + MTGNCGTVQ
Sbjct: 667 GFGQVWAAKWQGTPVAVKVLTGTAQAETVPKAVLEEFIAEINIISGMRHPNICLFMGACLTPPNRAIVTELCENGSLWDALRSPLGSSYCVADGHSRSAWPLELYELAPPPPLYHNGQVSFSVPSEPPMPPAGAWPWALVKRVSAGAARGMCYLHSGKP-PVLHRDLKSANILLDESYTAKLADFGLSRLKAVRSGMTGNCGTVQ 870 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig111459.938.1 >prot_H-elongata_contig111459.938.1 ID=prot_H-elongata_contig111459.938.1|Name=mRNA_H-elongata_contig111459.938.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp MLYCIGTWQVHQGIWRGTPVAVKVLVPVAQRDLDEELAADFRAEVLMLAAback to top mRNA from alignment at H-elongata_contig111459:216..2118+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig111459.938.1 ID=mRNA_H-elongata_contig111459.938.1|Name=mRNA_H-elongata_contig111459.938.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1903bp|location=Sequence derived from alignment at H-elongata_contig111459:216..2118+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig111459:216..2118+ >mRNA_H-elongata_contig111459.938.1 ID=mRNA_H-elongata_contig111459.938.1|Name=mRNA_H-elongata_contig111459.938.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1158bp|location=Sequence derived from alignment at H-elongata_contig111459:216..2118+ (Himanthalia elongata Himel1 dioecious)back to top |