mRNA_H-elongata_contig111459.938.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig111459.938.1
Unique NamemRNA_H-elongata_contig111459.938.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: D7FTY8_ECTSI (Putative tyrosine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY8_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 2.460e-85
Identity = 137/190 (72.11%), Postives = 154/190 (81.05%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLVPVAQRDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNS--MTGNCGTVQ 579
            G  QV+QG+WRGTPVA+KVL+P AQRDLDEELAADFRAEVLMLAALRHPNVC+FM ACM PPNRAIVTEL+++GSLWEALR   +P  ++     +R +D            TP  CWPWS++MKVAEG ACGM YLHQHEPFPI+HRDLKSANLLLD SFN KICDFGLARLKA+TNS  MTGNCGTVQ
Sbjct:  867 GFGQVYQGVWRGTPVAIKVLLPAAQRDLDEELAADFRAEVLMLAALRHPNVCLFMGACMVPPNRAIVTELLTRGSLWEALRADRVPEESIACS-FRRGSDRSGTAGTSSRVLTPQECWPWSVIMKVAEGLACGMWYLHQHEPFPILHRDLKSANLLLDSSFNPKICDFGLARLKAFTNSAAMTGNCGTVQ 1055          
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A6H5KM77_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM77_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 6.660e-85
Identity = 137/190 (72.11%), Postives = 154/190 (81.05%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLVPVAQRDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNS--MTGNCGTVQ 579
            G  QV+QG+WRGTPVA+KVL+P AQRDLDEELAADFRAEVLMLAALRHPNVC+FM ACM PPNRAIVTEL+++GSLWEALR   +P  ++     +R +D      P     TP  CWPWS++MKVAEG ACGM YLHQHEPFPI+HRDLKSANLLLD S N KICDFGLARLKA+TNS  MTGNCGTVQ
Sbjct: 1019 GFGQVYQGVWRGTPVAIKVLLPAAQRDLDEELAADFRAEVLMLAALRHPNVCLFMGACMVPPNRAIVTELLTRGSLWEALRADRVPEESIACY-FRRGSDRSCAAGPSSRILTPQECWPWSVIMKVAEGVACGMWYLHQHEPFPILHRDLKSANLLLDSSLNPKICDFGLARLKAFTNSAAMTGNCGTVQ 1207          
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A835ZK37_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK37_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.670e-65
Identity = 117/212 (55.19%), Postives = 137/212 (64.62%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLVPVAQ------------------------RDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
            G  QV++G WRGTPVA+KVL+  AQ                         ++D+ L ADF AEV MLAALRHPN+C+FM AC+ PP RAIVTELV++GSLW+ALR    P V  G         G  V        TPP  WPW  +++VAEG ACGMNYLH+  P P++HRDLKSANLLLDDS  VKICDFGLARLKA+T SMTGNCGT Q
Sbjct:  501 GFGQVYRGSWRGTPVAIKVLIQPAQVRARGAAINGEFECAYVCVERLRCEEMDDALVADFAAEVAMLAALRHPNICLFMGACLRPPRRAIVTELVARGSLWDALRDRAPPRVPHG-------CAGAGV-------ATPPEAWPWQAILRVAEGAACGMNYLHRASP-PVLHRDLKSANLLLDDSLAVKICDFGLARLKAFTTSMTGNCGTTQ 697          
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: B8BQF7_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQF7_THAPS)

HSP 1 Score: 183 bits (465), Expect = 1.240e-54
Identity = 96/189 (50.79%), Postives = 122/189 (64.55%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLVPVAQRD-LDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
            G  QV +  W+GTPVAVKVL  +AQ + + + +  +F AE+ +++  RHPN+C+FM AC+ PPNRAIVTEL   GSLW+ALR    P +A                        P G WPW LV +VA GTA GM YLH  EP P++HRDLKSAN+LLD+S+  K+ DFGL+RLKA  + MTGNCGTVQ
Sbjct:   16 GFGQVWKAKWKGTPVAVKVLTGLAQAEAVPKAVLEEFIAEINIVSGFRHPNICLFMGACLDPPNRAIVTELCENGSLWDALRT---PLIA------------------------PAGTWPWVLVKRVASGTARGMCYLHSGEP-PVLHRDLKSANILLDESYTAKLADFGLSRLKAVRSGMTGNCGTVQ 176          
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A7S1BCS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCS3_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.610e-54
Identity = 106/207 (51.21%), Postives = 136/207 (65.70%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLVPVAQRDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPN-RAIVTELVSQGSLWEALRKS----YLPSVALGMDP--------SKRLADGEAVHH-----PVESFTTPP-GCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
            G  QV +  WRGTPVAVK+L   A++ L   L  +F AE+ M++A+RHPN  +FM AC++PP+ RAIVTEL ++GSLW+ALR+     Y+P+  +  D           +   GE V        + S+  P  G WPW LV +VAEG A  M+YLH   P P++HRDLKSANLLLD+SF VKICDFGLARL+ + NSMTGNCGTVQ
Sbjct:  568 GFGQVWKANWRGTPVAVKILAGSAKQTLSPNLLQEFLAEISMVSAMRHPNCILFMGACVSPPHPRAIVTELAARGSLWDALRQPLPHPYVPADGMTRDAWPEALYCSGGKPTSGEDVEFGQKYVSMNSYAIPELGIWPWVLVKRVAEGAARAMSYLHSGHP-PVLHRDLKSANLLLDESFTVKICDFGLARLQQHDNSMTGNCGTVQ 773          
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A7S0UFT7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFT7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.090e-53
Identity = 99/209 (47.37%), Postives = 131/209 (62.68%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLVPVAQRD-LDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALR--------------------KSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
            G  QV +  WRGTPVAVKVL   AQ   + + +  +F+AE+ +L  +RHPN+C++M AC+ PPNRAI+TEL + GS W++LR                    + YLP    G+ PS   +DG ++   + +   P G WPW LV +V+ G A GM YLH   P P++HRDLKSANLLLD+S+  K+CDFGL+RLKA   SMT NCGTVQ
Sbjct:  389 GFGQVWKATWRGTPVAVKVLTGSAQNSHIAKPILEEFKAEINLLKGMRHPNICLYMGACLTPPNRAIITELAANGSAWDSLRLPLSPPYRAADGTPRGCWPLRLYLPGQH-GVPPS---SDGGSLSSGITAPIPPRGTWPWELVKRVSCGAARGMAYLHSGNP-PVLHRDLKSANLLLDESYTTKVCDFGLSRLKAQARSMTANCGTVQ 592          
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A6S8IK00_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8IK00_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.090e-53
Identity = 101/201 (50.25%), Postives = 129/201 (64.18%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLVPVAQ-RDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESFTTPPGC------------WPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
            G  QV + +W GTPVAVKVL   AQ   +   +  +F AE+ +L  +RHPN+C++M AC+APPNRAI+TEL + GSLW+ALR   L +     D   R A   +++ P      PP              WPW LV KVA G+A GMNYLH  +P P++HRDLKSAN+LLD+S+  K+CDFGL+RLKA   SMTGNCGTVQ
Sbjct:  656 GFGQVWKAMWNGTPVAVKVLTGSAQAHQVPRAILEEFAAEINLLKGMRHPNICLYMGACLAPPNRAIITELAANGSLWDALRLP-LSAPYTACDGLTRHAWPMSLYQPDPRHGVPPSMSRTVSHVPPKSTWPWILVKKVACGSARGMNYLHSGKP-PVLHRDLKSANILLDESYTPKVCDFGLSRLKAQDRSMTGNCGTVQ 854          
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A7S3QBK8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBK8_9STRA)

HSP 1 Score: 191 bits (485), Expect = 8.490e-53
Identity = 100/206 (48.54%), Postives = 128/206 (62.14%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLV----PVAQRDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSKRLADGEAVHHPVESF--------------TTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
            G  QV    WRGTPVAVKVL     P  +  + + +  +F AE+ +L+ +RHPN+C+++ AC+ P NRAIVTEL + GSLW+ALR    P  A+        ADG     P   +              + PP  WPW+LV +VAEG A GMNYLH   P  ++HRDLKSAN+LLDDS+N K+CDFGL+RLKA   +MTGNCGTVQ
Sbjct:  962 GFGQVWSATWRGTPVAVKVLSAITDPQTKMHVQKAILQEFAAEINLLSGMRHPNICLYIGACLEPTNRAIVTELAANGSLWDALRLPLQPPFAI------TPADGMPASWPFGLYDPHIFDRAGSGSILSPPPSTWPWALVRRVAEGAARGMNYLHCGMP-AVLHRDLKSANILLDDSYNPKVCDFGLSRLKAQEKTMTGNCGTVQ 1160          
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: A0A1Z5JP08_FISSO (Sterile alpha motif and leucine zipper containing kinase AZK n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP08_FISSO)

HSP 1 Score: 188 bits (477), Expect = 5.380e-52
Identity = 100/201 (49.75%), Postives = 127/201 (63.18%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLVPVAQ-RDLDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSY-LPSVALG-----------MDPSKRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
            G  QV +  WRGTPVAVK+L   AQ + +   +  +F AE+ +L  ++HPN+C++M AC+ PPNRAIVTEL + GSLW+ALR     P  A              +P  R     +  +P +    P   WPW LV KVA G A GM YLH  +P PI+HRDLKSAN+LLD+S+N K+CDFGL+RLKA   SMTGNCGTVQ
Sbjct:  573 GFGQVWKAKWRGTPVAVKILTGSAQSKHVPRAVLEEFAAEINLLKGMQHPNICLYMGACVVPPNRAIVTELAAHGSLWDALRLPLDSPFTACDGVSHNGWPTSLFEPDPRHGTPPSHRYPNQPPVPPKYQWPWVLVKKVAVGVARGMAYLHGGDP-PILHRDLKSANILLDESYNPKVCDFGLSRLKAQERSMTGNCGTVQ 772          
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Match: K0TI28_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TI28_THAOC)

HSP 1 Score: 186 bits (473), Expect = 2.690e-51
Identity = 98/205 (47.80%), Postives = 129/205 (62.93%), Query Frame = 1
Query:   16 GTWQVHQGIWRGTPVAVKVLVPVAQRD-LDEELAADFRAEVLMLAALRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPSK--------RLADGEAVHH--------PVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPIIHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ 579
            G  QV    W+GTPVAVKVL   AQ + + + +  +F AE+ +++ +RHPN+C+FM AC+ PPNRAIVTEL   GSLW+ALR     S  +    S+         LA    ++H        P E    P G WPW+LV +V+ G A GM YLH  +P P++HRDLKSAN+LLD+S+  K+ DFGL+RLKA  + MTGNCGTVQ
Sbjct:  667 GFGQVWAAKWQGTPVAVKVLTGTAQAETVPKAVLEEFIAEINIISGMRHPNICLFMGACLTPPNRAIVTELCENGSLWDALRSPLGSSYCVADGHSRSAWPLELYELAPPPPLYHNGQVSFSVPSEPPMPPAGAWPWALVKRVSAGAARGMCYLHSGKP-PVLHRDLKSANILLDESYTAKLADFGLSRLKAVRSGMTGNCGTVQ 870          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111459.938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTY8_ECTSI2.460e-8572.11Putative tyrosine kinase-like protein n=1 Tax=Ecto... [more]
A0A6H5KM77_9PHAE6.660e-8572.11Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835ZK37_9STRA2.670e-6555.19Kinase-like domain-containing protein n=1 Tax=Trib... [more]
B8BQF7_THAPS1.240e-5450.79Protein kinase domain-containing protein (Fragment... [more]
A0A7S1BCS3_9STRA2.610e-5451.21Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S0UFT7_9STRA2.090e-5347.37Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A6S8IK00_9STRA3.090e-5350.25Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A7S3QBK8_9STRA8.490e-5348.54Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5JP08_FISSO5.380e-5249.75Sterile alpha motif and leucine zipper containing ... [more]
K0TI28_THAOC2.690e-5147.80Protein kinase domain-containing protein n=1 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111459contigH-elongata_contig111459:216..2118 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.1
Seed ortholog evalue9.7e-74
Seed eggNOG ortholog2880.D7FTY8
Preferred namepats1
KEGG koko:K08844,ko:K17535
KEGG Pathwayko05012,map05012
GOsGO:0000278,GO:0000281,GO:0000910,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0015629,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0022402,GO:0023052,GO:0030587,GO:0031156,GO:0032502,GO:0035556,GO:0036211,GO:0042578,GO:0042641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043900,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0045595,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051301,GO:0051703,GO:0051704,GO:0051716,GO:0061640,GO:0065007,GO:0071704,GO:0090702,GO:0099120,GO:0099134,GO:0099135,GO:0099136,GO:0099139,GO:0140096,GO:1901261,GO:1901564,GO:1903047,GO:2000241
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
EC2.7.11.1
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative tyrosine kinase-like protein
Ec32 orthologEc-07_002880.1
Exons5
Model size579
Cds size579
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111459.938.1prot_H-elongata_contig111459.938.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig111459 216..2118 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929638.2969859-CDS-H-elongata_contig111459:215..3071622929638.2969859-CDS-H-elongata_contig111459:215..307Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 216..307 +
1691679101.1214974-CDS-H-elongata_contig111459:215..3071691679101.1214974-CDS-H-elongata_contig111459:215..307Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 216..307 +
1622929638.3266933-CDS-H-elongata_contig111459:507..6911622929638.3266933-CDS-H-elongata_contig111459:507..691Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 508..691 +
1691679101.1323512-CDS-H-elongata_contig111459:507..6911691679101.1323512-CDS-H-elongata_contig111459:507..691Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 508..691 +
1622929638.3443413-CDS-H-elongata_contig111459:941..10551622929638.3443413-CDS-H-elongata_contig111459:941..1055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 942..1055 +
1691679101.1403909-CDS-H-elongata_contig111459:941..10551691679101.1403909-CDS-H-elongata_contig111459:941..1055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 942..1055 +
1622929638.3599358-CDS-H-elongata_contig111459:1394..15341622929638.3599358-CDS-H-elongata_contig111459:1394..1534Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 1395..1534 +
1691679101.1485724-CDS-H-elongata_contig111459:1394..15341691679101.1485724-CDS-H-elongata_contig111459:1394..1534Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 1395..1534 +
1622929638.375788-CDS-H-elongata_contig111459:2069..21181622929638.375788-CDS-H-elongata_contig111459:2069..2118Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 2070..2118 +
1691679101.1568315-CDS-H-elongata_contig111459:2069..21181691679101.1568315-CDS-H-elongata_contig111459:2069..2118Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111459 2070..2118 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig111459.938.1

>prot_H-elongata_contig111459.938.1 ID=prot_H-elongata_contig111459.938.1|Name=mRNA_H-elongata_contig111459.938.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
MLYCIGTWQVHQGIWRGTPVAVKVLVPVAQRDLDEELAADFRAEVLMLAA
LRHPNVCMFMAACMAPPNRAIVTELVSQGSLWEALRKSYLPSVALGMDPS
KRLADGEAVHHPVESFTTPPGCWPWSLVMKVAEGTACGMNYLHQHEPFPI
IHRDLKSANLLLDDSFNVKICDFGLARLKAYTNSMTGNCGTVQ
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mRNA from alignment at H-elongata_contig111459:216..2118+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig111459.938.1 ID=mRNA_H-elongata_contig111459.938.1|Name=mRNA_H-elongata_contig111459.938.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1903bp|location=Sequence derived from alignment at H-elongata_contig111459:216..2118+ (Himanthalia elongata Himel1 dioecious)
ATGTTATATTGTATCGGAACGTGGCAGGTTCATCAAGGCATTTGGAGGGG AACACCTGTAGCAGTTAAGGTACTAGTTCCGGTGGCTCAAAGGTAAGAAC ACTAATAATATATAAGGAGTTGTTGATACTACTGCACCTACTGAATAATG CCAAGTCATACGGCATATGGAAAGTGCTTGGAGAACATTTTGACGCTATG ATATATGATATATTCCATATACTTGTCCTCATAAACACATATGTTTTGAC GCCCACCCCTTGCTTTTTAATGTCTTACTTTTTTTTAAACAGGGACTTGG ACGAGGAGCTGGCGGCGGACTTCCGTGCTGAGGTCCTCATGCTAGCTGCC CTAAGACATCCTAACGTGTGCATGTTCATGGCGGCGTGTATGGCCCCTCC TAACCGGGCGATAGTTACAGAGCTCGTGAGCCAAGGATCTCTGTGGGAGG CTCTGCGGAAGAGTTATCTTCCTTCGGTGAGATGGGATAAGACTGGTTAT CGGGAGCCAGACTGGTTTGTGCTTTCGTCAAGTACTGTACCTACAGTATG ATTTATCATGTACGATGTATTAGATTGTGGACTGTACGTTGACCTGTACC AGTAAAGCTTTGATTTTGGCCTTCTTGAAGCAGTTTACGGGCAACACTGT GCAGTAACCAATAAACGGTGGGCTGCCCTACAGACCAGTCGGATTGATTG GTGCTCAATCATTTTTTGCTGTACAGGTGGCGTTGGGCATGGACCCATCA AAGCGCTTAGCGGACGGAGAAGCAGTTCACCACCCCGTGGAATCGTTTAC TACCCCTCCCGGCTGCTGGCCTTGGTCTCTTGTAATGAAGGTGCGTTGTA ATCTCATATACTGGCTTTGCATTCTGTTGTAAAATACTGTTGGCAGTCTT CCGTCGCCTTTTTCGAGATGCCGACCCAATATCATCGTATATAATATTGT TAGTATACCGGTTAATCTTATAGATACATCTTTATATATCATAATATGTA CCTCTTGCGCCCTTCCATCTTCTAGTCCCTAGAGACACCACAACGATAAG AGTTACATTCCCGTAAAAAGCTAGCTCCCCATGTTCCCCAAGCTATGGCG TCGTTAAGACAGAGGTTATTCGGCAAGGCCAAGACAACTGTATCACTATC CTTTCGGCCAACCCGGATTTTTTCCTCAGGTCGCAGAGGGAACGGCGTGT GGGATGAATTACCTTCATCAACACGAGCCTTTCCCTATCATTCATAGAGA TCTGAAAAGTGCCAATCTGCTCTTGGACGATAGCTTCAATGTCAAGATCT GCGACTTTGGCCTCGCCAGGTGCGCCACACCTAACCCCTCACCCTCTCAT GGCTAACAATTTTCTATGTTCGAATAACATATTTTGGCTCTATAGAGGAC GCTTGACTGTGCACTGTCCAGCACTTTCACCAGGTCATTCTGAGGTAGAT CTAGTTGCGATATAGAGGTCGATTGAACCGTAGCTTTGTAACACATATAT CTGTAGCCATCGCCATGACCACCCAACTTGAGCAATTATATCATAATGAA GATGGTGGTGATGGTCAGTCAAAACTATGTTTAGCGAACTGTCGAGGTGT AGACGTTAGCGTCCACGTGATCCTGGCAATAATTCTAGAAATACGTGTTT TCACATTCATGTAATCGAACGACACAACTATAATGTAGTGACGTCACATC CTGCAAAGACGTATAGTGACGTCACATGCTGCAGCTCTTCAAATGTTATG TTACGTTAGAGACATCTCGATCAATGATATCACTGATTCCACGCATGTCT CATGTCGCATGTCATGATTTATGTGCAATATCTTCGTCTTGCTCCACGCT TCAGATTGAAGGCGTACACGAACTCAATGACGGGCAATTGCGGAACGGTG CAG
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Coding sequence (CDS) from alignment at H-elongata_contig111459:216..2118+

>mRNA_H-elongata_contig111459.938.1 ID=mRNA_H-elongata_contig111459.938.1|Name=mRNA_H-elongata_contig111459.938.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1158bp|location=Sequence derived from alignment at H-elongata_contig111459:216..2118+ (Himanthalia elongata Himel1 dioecious)
ATGTTATATTGTATCGGAACGTGGCAGGTTCATCAAGGCATTTGGAGGGG
AACACCTGTAGCAGTTAAGGTACTAGTTCCGGTGGCTCAAAGATGTTATA
TTGTATCGGAACGTGGCAGGTTCATCAAGGCATTTGGAGGGGAACACCTG
TAGCAGTTAAGGTACTAGTTCCGGTGGCTCAAAGGGACTTGGACGAGGAG
CTGGCGGCGGACTTCCGTGCTGAGGTCCTCATGCTAGCTGCCCTAAGACA
TCCTAACGTGTGCATGTTCATGGCGGCGTGTATGGCCCCTCCTAACCGGG
CGATAGTTACAGAGCTCGTGAGCCAAGGATCTCTGTGGGAGGCTCTGCGG
AAGAGTTATCTTCCTTCGGGACTTGGACGAGGAGCTGGCGGCGGACTTCC
GTGCTGAGGTCCTCATGCTAGCTGCCCTAAGACATCCTAACGTGTGCATG
TTCATGGCGGCGTGTATGGCCCCTCCTAACCGGGCGATAGTTACAGAGCT
CGTGAGCCAAGGATCTCTGTGGGAGGCTCTGCGGAAGAGTTATCTTCCTT
CGGTGGCGTTGGGCATGGACCCATCAAAGCGCTTAGCGGACGGAGAAGCA
GTTCACCACCCCGTGGAATCGTTTACTACCCCTCCCGGCTGCTGGCCTTG
GTCTCTTGTAATGAAGGTGGCGTTGGGCATGGACCCATCAAAGCGCTTAG
CGGACGGAGAAGCAGTTCACCACCCCGTGGAATCGTTTACTACCCCTCCC
GGCTGCTGGCCTTGGTCTCTTGTAATGAAGGTCGCAGAGGGAACGGCGTG
TGGGATGAATTACCTTCATCAACACGAGCCTTTCCCTATCATTCATAGAG
ATCTGAAAAGTGCCAATCTGCTCTTGGACGATAGCTTCAATGTCAAGATC
TGCGACTTTGGCCTCGCCAGGTCGCAGAGGGAACGGCGTGTGGGATGAAT
TACCTTCATCAACACGAGCCTTTCCCTATCATTCATAGAGATCTGAAAAG
TGCCAATCTGCTCTTGGACGATAGCTTCAATGTCAAGATCTGCGACTTTG
GCCTCGCCAGATTGAAGGCGTACACGAACTCAATGACGGGCAATTGCGGA
ACGGTGCAGATTGAAGGCGTACACGAACTCAATGACGGGCAATTGCGGAA
CGGTGCAG
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