mRNA_H-elongata_contig111351.932.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig111351.932.1
Unique NamemRNA_H-elongata_contig111351.932.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI001EE9C0E7 (uncharacterized protein LOC124370291 n=3 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EE9C0E7)

HSP 1 Score: 320 bits (819), Expect = 1.100e-103
Identity = 182/249 (73.09%), Postives = 202/249 (81.12%), Query Frame = 1
Query:    1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVS--LYKPMEKLNIDTVLANTVHPNHCTWNLT----DPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            D V D V ++HL+H+AG  VDE+R+TL T AASQTTDCGLG+ LDVV EH  V LGA+L+Q  T  ++ G   V+  L K M K     VL + V+      N++      D MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  301 DGVTDHVLQKHLEHSAGLLVDEARDTLDTAAASQTTDCGLGDALDVVTEHLPVTLGASLSQPLTTFASTGHVAVAVALVKQMIK---SPVLGSFVNSGCSGKNISHLARQADAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 546          
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI001AAD7B44 (uncharacterized protein LOC120898323 n=9 Tax=Diptera TaxID=7147 RepID=UPI001AAD7B44)

HSP 1 Score: 305 bits (780), Expect = 2.940e-98
Identity = 167/243 (68.72%), Postives = 194/243 (79.84%), Query Frame = 1
Query:    1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            DR+ + + +++ Q A GF VDE+ +T H++A SQT D GLGN LDV+ +HF+V LG++  QTF++LS+ G     + +  +  ++               NL     MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  279 DRITNHILQKYFQDATGFLVDEAGDTFHSSAPSQTADGGLGNALDVIPQHFSVTLGSSFTQTFSSLSSSGDDEHRIMRENKGCSL-----------RAQRNLRSRSEMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 510          
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: A0A6L5CPT4_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CPT4_9INSE)

HSP 1 Score: 304 bits (778), Expect = 6.210e-98
Identity = 171/243 (70.37%), Postives = 190/243 (78.19%), Query Frame = 1
Query:    1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            D VAD V EEHL+  AG  VDE+R+TLH+T ASQT D GLG+TLDV+A++ A+ LGA+LA++ ++ +A G                                     MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  305 DGVADHVLEEHLEDTAGLLVDEARDTLHSTTASQTADGGLGDTLDVIAKNLAMTLGASLAESLSSFAATGH-----------------------------------TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 512          
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: A0A8B7FLL1_MICMU (uncharacterized protein LOC105865490 n=3 Tax=Lemuriformes TaxID=376915 RepID=A0A8B7FLL1_MICMU)

HSP 1 Score: 296 bits (759), Expect = 4.430e-96
Identity = 174/271 (64.21%), Postives = 199/271 (73.43%), Query Frame = 1
Query:    1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVG-----------KRPVSLYKPMEKLNI-----------------DTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            DRV DDV +EHLQH    F++E+R+ L  +AAS+T + GL N LDVV++  A+AL A  A+TF+A S              ++  S ++ + K+ I                   +L    H      N T  +IMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  162 DRVPDDVLQEHLQHTPSLFINEARDPLDASAASKTPNGGLRNALDVVSQDLAMALSAAFAETFSAFSPARHDCNADDTISLEKTASTHEKLLKILIKLTNFYIVFSVQEIPLKSLLLYCDFHRKMVIHNDTIKNIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 432          
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI00115635DF (uncharacterized protein LOC115258846 n=3 Tax=Bilateria TaxID=33213 RepID=UPI00115635DF)

HSP 1 Score: 290 bits (741), Expect = 9.810e-95
Identity = 162/230 (70.43%), Postives = 190/230 (82.61%), Query Frame = 1
Query:   55 FVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSA-----VGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            F D++ ++L+TT+ASQTTD GLGNTLDV+A++ A+ LGA+L++TFT+ +A     +        K ++ +  +  +  +V+    +        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  101 FGDQTGDSLYTTSASQTTDGGLGNTLDVIAQNLAMPLGASLSETFTSFAANLFPLIRLPAFRQQKSIKAVRFEVSILLSVYTPSYSVQDKRTSAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 330          
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI00106E9675 (uncharacterized protein LOC114553512 n=1 Tax=Perca flavescens TaxID=8167 RepID=UPI00106E9675)

HSP 1 Score: 291 bits (745), Expect = 2.260e-93
Identity = 169/249 (67.87%), Postives = 189/249 (75.90%), Query Frame = 1
Query:    1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDI------MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            D + D V +EHLQH AG  VD++ +TLH+ AASQT D GLG+ LDV+ E+F       L++T      V K P  + K    +     + N V       ++    I      MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  236 DGITDHVLQEHLQHTAGLLVDQTGDTLHSAAASQTADGGLGDALDVITENFTAFSKEMLSETL-----VDKVPEYIEKLGSAIGSLNPVPNAVRLGALVISMIIEIIIKRQKAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 479          
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI0013C41DCA (uncharacterized protein LOC115519791 n=1 Tax=Lynx canadensis TaxID=61383 RepID=UPI0013C41DCA)

HSP 1 Score: 292 bits (748), Expect = 1.010e-92
Identity = 168/243 (69.14%), Postives = 188/243 (77.37%), Query Frame = 1
Query:    1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            D + ++VF+E+LQHA G  VDE+ + L ++   +  +C LG+ LDVV ++FAVALG  LAQ F  LS+         +  EK   DT                   IMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  354 DCIPNNVFQENLQHAPGLLVDEAGDPLDSSTPGKAPNCRLGDALDVVPQNFAVALGTPLAQAFATLSSP--------RHSEKQAGDTTFG----------------IMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 572          
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: A0A340XWN2_LIPVE (uncharacterized protein LOC103069308 n=1 Tax=Lipotes vexillifer TaxID=118797 RepID=A0A340XWN2_LIPVE)

HSP 1 Score: 286 bits (733), Expect = 4.560e-92
Identity = 165/246 (67.07%), Postives = 192/246 (78.05%), Query Frame = 1
Query:    1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLG--NTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEK-LNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            DRV +D+ +EH QH +G FV+E+ + L T A S+T + GLG  N   ++  +    L  ++ +T  A+  + KR     KP  K   +  +L   V  +   W +++ DIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  203 DRVPNDILQEHFQHTSGLFVNEAGDALDTPAPSKTPNGGLGEINISGLIVRY----LKRSVYRTKLAIDGLRKR-----KPHSKEKRLKALLCKLVPVSTQLWRISESDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 439          
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI001CEFC89A (uncharacterized protein LOC122899199 n=1 Tax=Neovison vison TaxID=452646 RepID=UPI001CEFC89A)

HSP 1 Score: 286 bits (733), Expect = 1.290e-91
Identity = 173/272 (63.60%), Postives = 191/272 (70.22%), Query Frame = 1
Query:    1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSA--------------------------VGKRPVSLYKP---MEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            D V DDV +EHLQH     +DE+ + L  +  S+  +   GN LDVV +H AVALG   AQ  TALS                           +G R VS + P   + K     V    +  +H    L   +IMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  205 DCVPDDVLQEHLQHTPSLLIDEAGDPLDASTPSKAPNRRFGNALDVVPQHLAVALGTPFAQALTALSPSRHNDCSSQTQLLERSSKVDPCLQPEIGGRIVSPWMPHVELAKFAELGVSRGNLFEDHY-QKLPYENIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475          
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI001447504E (uncharacterized protein LOC117249587 n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001447504E)

HSP 1 Score: 277 bits (709), Expect = 3.100e-90
Identity = 160/243 (65.84%), Postives = 173/243 (71.19%), Query Frame = 1
Query:    1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
            D V DDV +E L+H AG  VDE+ +TLHT AASQT D G G++LDV+ E+F                                                        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQE++EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:  118 DGVTDDVLQEDLEHPAGLLVDETGDTLHTAAASQTADGGFGDSLDVITENF-------------------------------------------------------TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESSEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001EE9C0E71.100e-10373.09uncharacterized protein LOC124370291 n=3 Tax=Homal... [more]
UPI001AAD7B442.940e-9868.72uncharacterized protein LOC120898323 n=9 Tax=Dipte... [more]
A0A6L5CPT4_9INSE6.210e-9870.37Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]
A0A8B7FLL1_MICMU4.430e-9664.21uncharacterized protein LOC105865490 n=3 Tax=Lemur... [more]
UPI00115635DF9.810e-9570.43uncharacterized protein LOC115258846 n=3 Tax=Bilat... [more]
UPI00106E96752.260e-9367.87uncharacterized protein LOC114553512 n=1 Tax=Perca... [more]
UPI0013C41DCA1.010e-9269.14uncharacterized protein LOC115519791 n=1 Tax=Lynx ... [more]
A0A340XWN2_LIPVE4.560e-9267.07uncharacterized protein LOC103069308 n=1 Tax=Lipot... [more]
UPI001CEFC89A1.290e-9163.60uncharacterized protein LOC122899199 n=1 Tax=Neovi... [more]
UPI001447504E3.100e-9065.84uncharacterized protein LOC117249587 n=1 Tax=Epine... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111351contigH-elongata_contig111351:418..1420 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score307.0
Seed ortholog evalue7.9e-81
Seed eggNOG ortholog9739.XP_004315566.1
KEGG koko:K11253
KEGG Pathwayko05034,ko05202,ko05322,map05034,map05202,map05322
EggNOG free text desc.protein heterodimerization activity
EggNOG OGs39ZTV@33154,3BPDH@33208,3D6BK@33213,48E1W@7711,494V8@7742,COG2036@1,KOG1745@2759
COG Functional cat.B
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04147
Hectar predicted targeting categoryother localisation
Exons2
Model size732
Cds size732
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929637.7137768-CDS-H-elongata_contig111351:417..9461622929637.7137768-CDS-H-elongata_contig111351:417..946Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111351 418..946 -
1691679100.8685288-CDS-H-elongata_contig111351:417..9461691679100.8685288-CDS-H-elongata_contig111351:417..946Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111351 418..946 -
1622929637.7292092-CDS-H-elongata_contig111351:1217..14201622929637.7292092-CDS-H-elongata_contig111351:1217..1420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111351 1218..1420 -
1691679100.8798406-CDS-H-elongata_contig111351:1217..14201691679100.8798406-CDS-H-elongata_contig111351:1217..1420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111351 1218..1420 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111351.932.1prot_H-elongata_contig111351.932.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig111351 418..1420 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig111351.932.1

>prot_H-elongata_contig111351.932.1 ID=prot_H-elongata_contig111351.932.1|Name=mRNA_H-elongata_contig111351.932.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=244bp
DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEH
FAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTW
NLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYR
PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLAL
QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS*
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mRNA from alignment at H-elongata_contig111351:418..1420-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig111351.932.1 ID=mRNA_H-elongata_contig111351.932.1|Name=mRNA_H-elongata_contig111351.932.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1003bp|location=Sequence derived from alignment at H-elongata_contig111351:418..1420- (Himanthalia elongata Himel1 dioecious)
GACCGAGTCGCGGATGACGTTTTCGAGGAACACCTTCAGCACGCCGCGGG TTTCTTCGTAGATGAGTCCAGAAATACGCTTCACACCACCGCGGCGAGCC AGACGACGGATTGCGGGCTTGGTAATACCCTGGATGTTGTCGCGGAGCAC TTTGCGGTGGCGCTTGGCGCCACCCTTGCCCAAACCTTTACCGCCCTTTC CGCGTCCAGACATGATGCTCTTTGGGTCAGATGTAGAAATGTTCAGAGTG TGATTGTGCGTCCGATGTGTTCAGAATGTGATTGTCCATGCTGTTCATAC TGTCCACACCTGGCAGGCGTTTGGTGTGTGTTGTGCCGAAGAGTAATAAG ACTAGCCGGTGATTGGTCGTGAATTATTGTTTGTGATACAGTGGTCGGCA AAGTCACAAACAAGCAGGATTTTAGAATTTTAACCAATCATAATGCGCCG GCTGATTTCCACAATCGGGGCAAGAGTGGGCAAACGGCCTGTGTCTCTAT ATAAACCTATGGAAAAATTGAATATTGACACTGTCCTCGCCAATACCGTT CACCCCAATCACTGCACTTGGAACTTAACTGATCCCGATATAATGGCTCG CACTAAGCAGACCGCTCGCAAGTCTACCGGAGGCAAAGCTCCGCGCAAGC AGCTGGCTACCAAGGCTGCCCGTAAGTCTGCCCCGGCCACAGGTGGTGTG AAGAAGCCCCACCGCTACAGGCCGGGCACCGTGGCGTTGCGCGAGATCCG CCGTTATCAAAAATCGACTGAACTCCTAATCCGTAAGCTGCCCTTCCAGC GTCTCGTGCGCGAGATCGCCCAAGACTTCAAGAGTGACCTGCGCTTCCAG GGATCTGCAGTTTTGGCCCTTCAAGAAGCCGCCGAGGCATATCTTGTTGG TCTGTTCGAAGACACCAACCTGTGCGCCATTCACGCCAAGCGCGTTACCA TTATGCCGAAGGACATCCAGCTGGCCAGACGCATCCGTGGAGAACGCTCG TGA
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Coding sequence (CDS) from alignment at H-elongata_contig111351:418..1420-

>mRNA_H-elongata_contig111351.932.1 ID=mRNA_H-elongata_contig111351.932.1|Name=mRNA_H-elongata_contig111351.932.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1464bp|location=Sequence derived from alignment at H-elongata_contig111351:418..1420- (Himanthalia elongata Himel1 dioecious)
GACCGAGTCGCGGATGACGTTTTCGAGGAACACCTTCAGCACGCCGCGGG
TTTCTTCGTAGATGAGTCCAGAAATACGCTTCACACCACCGCGGCGAGCC
AGACGACGGATTGCGGGCTTGGTAATACCCTGGATGTTGTCGCGGAGCAC
TTTGCGGTGGCGCTTGGCGCCACCCTTGCCCAAACCTTTACCGCCCTTTC
CGCGACCGAGTCGCGGATGACGTTTTCGAGGAACACCTTCAGCACGCCGC
GGGTTTCTTCGTAGATGAGTCCAGAAATACGCTTCACACCACCGCGGCGA
GCCAGACGACGGATTGCGGGCTTGGTAATACCCTGGATGTTGTCGCGGAG
CACTTTGCGGTGGCGCTTGGCGCCACCCTTGCCCAAACCTTTACCGCCCT
TTCCGCAGTGGGCAAACGGCCTGTGTCTCTATATAAACCTATGGAAAAAT
TGAATATTGACACTGTCCTCGCCAATACCGTTCACCCCAATCACTGCACT
TGGAACTTAACTGATCCCGATATAATGGCTCGCACTAAGCAGACCGCTCG
CAAGTCTACCGGAGGCAAAGCTCCGCGCAAGCAGCTGGCTACCAAGGCTG
CCCGTAAGTCTGCCCCGGCCACAGGTGGTGTGAAGAAGCCCCACCGCTAC
AGGCCGGGCACCGTGGCGTTGCGCGAGATCCGCCGTTATCAAAAATCGAC
TGAACTCCTAATCCGTAAGCTGCCCTTCCAGCGTCTCGTGCGCGAGATCG
CCCAAGACTTCAAGAGTGACCTGCGCTTCCAGGGATCTGCAGTTTTGGCC
CTTCAAGAAGCCGCCGAGGCATATCTTGTTGGTCTGTTCGAAGACACCAA
CCTGTGCGCCATTCACGCCAAGCGCGTTACCATTATGCCGAAGGACATCC
AGCTGGCCAGACGCATCCGTGGAGAACGCTCGTGAAGTGGGCAAACGGCC
TGTGTCTCTATATAAACCTATGGAAAAATTGAATATTGACACTGTCCTCG
CCAATACCGTTCACCCCAATCACTGCACTTGGAACTTAACTGATCCCGAT
ATAATGGCTCGCACTAAGCAGACCGCTCGCAAGTCTACCGGAGGCAAAGC
TCCGCGCAAGCAGCTGGCTACCAAGGCTGCCCGTAAGTCTGCCCCGGCCA
CAGGTGGTGTGAAGAAGCCCCACCGCTACAGGCCGGGCACCGTGGCGTTG
CGCGAGATCCGCCGTTATCAAAAATCGACTGAACTCCTAATCCGTAAGCT
GCCCTTCCAGCGTCTCGTGCGCGAGATCGCCCAAGACTTCAAGAGTGACC
TGCGCTTCCAGGGATCTGCAGTTTTGGCCCTTCAAGAAGCCGCCGAGGCA
TATCTTGTTGGTCTGTTCGAAGACACCAACCTGTGCGCCATTCACGCCAA
GCGCGTTACCATTATGCCGAAGGACATCCAGCTGGCCAGACGCATCCGTG
GAGAACGCTCGTGA
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