mRNA_H-elongata_contig111351.932.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI001EE9C0E7 (uncharacterized protein LOC124370291 n=3 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EE9C0E7) HSP 1 Score: 320 bits (819), Expect = 1.100e-103 Identity = 182/249 (73.09%), Postives = 202/249 (81.12%), Query Frame = 1
Query: 1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVS--LYKPMEKLNIDTVLANTVHPNHCTWNLT----DPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
D V D V ++HL+H+AG VDE+R+TL T AASQTTDCGLG+ LDVV EH V LGA+L+Q T ++ G V+ L K M K VL + V+ N++ D MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 301 DGVTDHVLQKHLEHSAGLLVDEARDTLDTAAASQTTDCGLGDALDVVTEHLPVTLGASLSQPLTTFASTGHVAVAVALVKQMIK---SPVLGSFVNSGCSGKNISHLARQADAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 546
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI001AAD7B44 (uncharacterized protein LOC120898323 n=9 Tax=Diptera TaxID=7147 RepID=UPI001AAD7B44) HSP 1 Score: 305 bits (780), Expect = 2.940e-98 Identity = 167/243 (68.72%), Postives = 194/243 (79.84%), Query Frame = 1
Query: 1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
DR+ + + +++ Q A GF VDE+ +T H++A SQT D GLGN LDV+ +HF+V LG++ QTF++LS+ G + + + ++ NL MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 279 DRITNHILQKYFQDATGFLVDEAGDTFHSSAPSQTADGGLGNALDVIPQHFSVTLGSSFTQTFSSLSSSGDDEHRIMRENKGCSL-----------RAQRNLRSRSEMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 510
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: A0A6L5CPT4_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CPT4_9INSE) HSP 1 Score: 304 bits (778), Expect = 6.210e-98 Identity = 171/243 (70.37%), Postives = 190/243 (78.19%), Query Frame = 1
Query: 1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
D VAD V EEHL+ AG VDE+R+TLH+T ASQT D GLG+TLDV+A++ A+ LGA+LA++ ++ +A G MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 305 DGVADHVLEEHLEDTAGLLVDEARDTLHSTTASQTADGGLGDTLDVIAKNLAMTLGASLAESLSSFAATGH-----------------------------------TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 512
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: A0A8B7FLL1_MICMU (uncharacterized protein LOC105865490 n=3 Tax=Lemuriformes TaxID=376915 RepID=A0A8B7FLL1_MICMU) HSP 1 Score: 296 bits (759), Expect = 4.430e-96 Identity = 174/271 (64.21%), Postives = 199/271 (73.43%), Query Frame = 1
Query: 1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVG-----------KRPVSLYKPMEKLNI-----------------DTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
DRV DDV +EHLQH F++E+R+ L +AAS+T + GL N LDVV++ A+AL A A+TF+A S ++ S ++ + K+ I +L H N T +IMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 162 DRVPDDVLQEHLQHTPSLFINEARDPLDASAASKTPNGGLRNALDVVSQDLAMALSAAFAETFSAFSPARHDCNADDTISLEKTASTHEKLLKILIKLTNFYIVFSVQEIPLKSLLLYCDFHRKMVIHNDTIKNIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 432
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI00115635DF (uncharacterized protein LOC115258846 n=3 Tax=Bilateria TaxID=33213 RepID=UPI00115635DF) HSP 1 Score: 290 bits (741), Expect = 9.810e-95 Identity = 162/230 (70.43%), Postives = 190/230 (82.61%), Query Frame = 1
Query: 55 FVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSA-----VGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
F D++ ++L+TT+ASQTTD GLGNTLDV+A++ A+ LGA+L++TFT+ +A + K ++ + + + +V+ + MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 101 FGDQTGDSLYTTSASQTTDGGLGNTLDVIAQNLAMPLGASLSETFTSFAANLFPLIRLPAFRQQKSIKAVRFEVSILLSVYTPSYSVQDKRTSAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 330
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI00106E9675 (uncharacterized protein LOC114553512 n=1 Tax=Perca flavescens TaxID=8167 RepID=UPI00106E9675) HSP 1 Score: 291 bits (745), Expect = 2.260e-93 Identity = 169/249 (67.87%), Postives = 189/249 (75.90%), Query Frame = 1
Query: 1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDI------MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
D + D V +EHLQH AG VD++ +TLH+ AASQT D GLG+ LDV+ E+F L++T V K P + K + + N V ++ I MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 236 DGITDHVLQEHLQHTAGLLVDQTGDTLHSAAASQTADGGLGDALDVITENFTAFSKEMLSETL-----VDKVPEYIEKLGSAIGSLNPVPNAVRLGALVISMIIEIIIKRQKAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 479
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI0013C41DCA (uncharacterized protein LOC115519791 n=1 Tax=Lynx canadensis TaxID=61383 RepID=UPI0013C41DCA) HSP 1 Score: 292 bits (748), Expect = 1.010e-92 Identity = 168/243 (69.14%), Postives = 188/243 (77.37%), Query Frame = 1
Query: 1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
D + ++VF+E+LQHA G VDE+ + L ++ + +C LG+ LDVV ++FAVALG LAQ F LS+ + EK DT IMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 354 DCIPNNVFQENLQHAPGLLVDEAGDPLDSSTPGKAPNCRLGDALDVVPQNFAVALGTPLAQAFATLSSP--------RHSEKQAGDTTFG----------------IMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 572
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: A0A340XWN2_LIPVE (uncharacterized protein LOC103069308 n=1 Tax=Lipotes vexillifer TaxID=118797 RepID=A0A340XWN2_LIPVE) HSP 1 Score: 286 bits (733), Expect = 4.560e-92 Identity = 165/246 (67.07%), Postives = 192/246 (78.05%), Query Frame = 1
Query: 1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLG--NTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEK-LNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
DRV +D+ +EH QH +G FV+E+ + L T A S+T + GLG N ++ + L ++ +T A+ + KR KP K + +L V + W +++ DIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 203 DRVPNDILQEHFQHTSGLFVNEAGDALDTPAPSKTPNGGLGEINISGLIVRY----LKRSVYRTKLAIDGLRKR-----KPHSKEKRLKALLCKLVPVSTQLWRISESDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 439
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI001CEFC89A (uncharacterized protein LOC122899199 n=1 Tax=Neovison vison TaxID=452646 RepID=UPI001CEFC89A) HSP 1 Score: 286 bits (733), Expect = 1.290e-91 Identity = 173/272 (63.60%), Postives = 191/272 (70.22%), Query Frame = 1
Query: 1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSA--------------------------VGKRPVSLYKP---MEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
D V DDV +EHLQH +DE+ + L + S+ + GN LDVV +H AVALG AQ TALS +G R VS + P + K V + +H L +IMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 205 DCVPDDVLQEHLQHTPSLLIDEAGDPLDASTPSKAPNRRFGNALDVVPQHLAVALGTPFAQALTALSPSRHNDCSSQTQLLERSSKVDPCLQPEIGGRIVSPWMPHVELAKFAELGVSRGNLFEDHY-QKLPYENIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Match: UPI001447504E (uncharacterized protein LOC117249587 n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001447504E) HSP 1 Score: 277 bits (709), Expect = 3.100e-90 Identity = 160/243 (65.84%), Postives = 173/243 (71.19%), Query Frame = 1
Query: 1 DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHFAVALGATLAQTFTALSAVGKRPVSLYKPMEKLNIDTVLANTVHPNHCTWNLTDPDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 729
D V DDV +E L+H AG VDE+ +TLHT AASQT D G G++LDV+ E+F MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQE++EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 118 DGVTDDVLQEDLEHPAGLLVDETGDTLHTAAASQTADGGFGDSLDVITENF-------------------------------------------------------TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESSEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111351.932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig111351.932.1 >prot_H-elongata_contig111351.932.1 ID=prot_H-elongata_contig111351.932.1|Name=mRNA_H-elongata_contig111351.932.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=244bp DRVADDVFEEHLQHAAGFFVDESRNTLHTTAASQTTDCGLGNTLDVVAEHback to top mRNA from alignment at H-elongata_contig111351:418..1420- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig111351.932.1 ID=mRNA_H-elongata_contig111351.932.1|Name=mRNA_H-elongata_contig111351.932.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1003bp|location=Sequence derived from alignment at H-elongata_contig111351:418..1420- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig111351:418..1420- >mRNA_H-elongata_contig111351.932.1 ID=mRNA_H-elongata_contig111351.932.1|Name=mRNA_H-elongata_contig111351.932.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1464bp|location=Sequence derived from alignment at H-elongata_contig111351:418..1420- (Himanthalia elongata Himel1 dioecious)back to top |