mRNA_H-elongata_contig111271.925.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE) HSP 1 Score: 247 bits (630), Expect = 4.130e-73 Identity = 131/198 (66.16%), Postives = 135/198 (68.18%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNL---TGGD---------------------------------------------------MQGTLWPAFAMHQPGDLVTFLP 432
QG RGWGVALATHGF RGSG+HRWRVRLDSVNRRGH+FLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYG+RMSAGMTVELTLNTDIGLLSVGN D+GEDFGPAMSNL GG Q TLWPAFAMHQPGD VTFLP
Sbjct: 2403 QGPARGWGVALATHGFARGSGIHRWRVRLDSVNRRGHVFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGARMSAGMTVELTLNTDIGLLSVGNADTGEDFGPAMSNLYENVGGGGSFGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADAQQATLWPAFAMHQPGDSVTFLP 2600
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: A0A1V9YS56_9STRA (HECT E3 ubiquitin ligase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YS56_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.580e-32 Identity = 63/144 (43.75%), Postives = 89/144 (61.81%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNLTGGDMQGTLWPAFAMHQPGDLVTFLP 432
Q + + WG+ L+T+G +GLH W VRLD + GH+FLGV+TR+ ++ +Y+G DRHGWG + ++ L+H S++R YG S G V + LNTD G LS G D D+G A LT GTL+PA ++Q D VT +P
Sbjct: 802 QHTAKQWGMVLSTYGCAPNTGLHEWAVRLDRCEK-GHVFLGVSTREASVATYVGGDRHGWGLIGTRALWHNRSKVRGDYGDGFSTGSVVRIRLNTDTGALSFGLLDDDSDWGVAFDGLT---QHGTLYPAIGLYQRDDQVTIVP 941
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: T0QV62_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QV62_SAPDV) HSP 1 Score: 129 bits (324), Expect = 6.460e-32 Identity = 63/144 (43.75%), Postives = 89/144 (61.81%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNLTGGDMQGTLWPAFAMHQPGDLVTFLP 432
Q + + WG+ L+T+G +GLH W VRLD + GH+FLGV+TR+ ++ +Y+G DRHGWG + ++ L+H S++R YG S G V + LNTD G LS G D D+G A LT GTL+PA ++Q D VT +P
Sbjct: 843 QHTAKQWGMVLSTYGCAPNTGLHEWAVRLDRCEK-GHVFLGVSTREASVATYVGGDRHGWGLIGTRALWHNRSKVRGDYGDGFSTGSVVRIRLNTDTGALSFGLLDDDSDWGIAFDGLT---QHGTLYPAIGLYQRDDQVTLVP 982
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: A0A485L796_9STRA (Aste57867_15865 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L796_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.140e-31 Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNLTGGDMQGTLWPAFAMHQPGDLVTFLP 432
Q + + WG+ ++T+G +GLH W VRLD + GH+FLGV TR+ ++ +Y+G DR GWG + ++ L+H S++R YG S G TV + LNTD G LS G D D+G A LT GTL+PA ++Q D VT +P
Sbjct: 835 QHTAKQWGMVISTYGCAPNTGLHEWAVRLDRCEK-GHVFLGVCTREASVSTYVGGDRQGWGLIGTRALWHNRSKVRGDYGDGFSTGSTVRIRLNTDTGALSFGLLDEDSDWGVAFDGLT---QYGTLYPAIGLYQRDDQVTIVP 974
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: A0A1V9ZRW4_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRW4_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.050e-30 Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNLTGGDMQGTLWPAFAMHQPGDLVTFL 429
Q + + WG+ L+T+G +G+H W VRLD + GH+FLGV+TR+ ++ +Y+G DRHGWG + ++ L+H S++R YG S G V + LNTD G LS G D D+G A LT GTL+PA ++Q D VT +
Sbjct: 837 QHTAKQWGMVLSTYGCAPNTGVHEWAVRLDRCEK-GHVFLGVSTREASVATYVGGDRHGWGLIGTRALWHNRSKVRGDYGDGFSTGSVVRIRLNTDTGALSFGLLDDDSDWGVAFDGLT---QHGTLYPAIGLYQRDDQVTLV 975
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: A0A6A5A8C6_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A8C6_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.310e-30 Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNLTGGDMQGTLWPAFAMHQPGDLVTFLP 432
Q + + WG+ L+T+ +GLH W VRLD + GH+FLGV TR A+ +Y+G DR GWG + ++ L+H S++R YG S G TV + LNTD G LS G D D+G A LT G L+PA ++Q D VT +P
Sbjct: 207 QHTAKQWGMVLSTYACAPNTGLHEWAVRLDRCEK-GHVFLGVCTRDAAVSTYVGGDRQGWGLIGTRALWHNRSKVRGDYGDGFSTGSTVRIRLNTDTGALSFGLVDDDSDWGTAFDGLT---QYGALYPAIGLYQRDDQVTLVP 346
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: A0A397F9E8_9STRA (B30.2/SPRY domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F9E8_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.480e-30 Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNLTGGDMQGTLWPAFAMHQPGDLVTFLP 432
Q + + WG+ L+T+ +GLH W VRLD + GH+FLGV TR A+ +Y+G DR GWG + ++ L+H S++R YG S G TV + LNTD G LS G D D+G A LT G L+PA ++Q D VT +P
Sbjct: 328 QHTAKQWGMVLSTYACAPNTGLHEWAVRLDRCEK-GHVFLGVCTRDAAVSTYVGGDRQGWGLIGTRALWHNRSKVRGDYGDGFSTGSTVRIRLNTDTGALSFGLVDDDSDWGTAFDGLT---QYGALYPAIGLYQRDDQVTLVP 467
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: A0A397A7N1_9STRA (B30.2/SPRY domain-containing protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A7N1_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.520e-30 Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNLTGGDMQGTLWPAFAMHQPGDLVTFLP 432
Q + + WG+ L+T+ +GLH W VRLD + GH+FLGV TR A+ +Y+G DR GWG + ++ L+H S++R YG S G TV + LNTD G LS G D D+G A LT G L+PA ++Q D VT +P
Sbjct: 328 QHTAKQWGMVLSTYACAPNTGLHEWAVRLDRCEK-GHVFLGVCTRDAAVSTYVGGDRQGWGLIGTRALWHNRSKVRGDYGDGFSTGSTVRIRLNTDTGALSFGLVDDDSDWGTAFDGLT---QYGALYPAIGLYQRDDQVTLVP 467
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: A0A397ANH5_9STRA (B30.2/SPRY domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ANH5_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.550e-30 Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNLTGGDMQGTLWPAFAMHQPGDLVTFLP 432
Q + + WG+ L+T+ +GLH W VRLD + GH+FLGV TR A+ +Y+G DR GWG + ++ L+H S++R YG S G TV + LNTD G LS G D D+G A LT G L+PA ++Q D VT +P
Sbjct: 328 QHTAKQWGMVLSTYACAPNTGLHEWAVRLDRCEK-GHVFLGVCTRDAAVSTYVGGDRQGWGLIGTRALWHNRSKVRGDYGDGFSTGSTVRIRLNTDTGALSFGLVDDDSDWGTAFDGLT---QYGALYPAIGLYQRDDQVTLVP 467
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Match: A0A3L6VC71_9STRA (B30.2/SPRY domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VC71_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.580e-30 Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 1 QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGSYLGADRHGWGYLVSQDLYHGGSRLRSGYGSRMSAGMTVELTLNTDIGLLSVGNTDSGEDFGPAMSNLTGGDMQGTLWPAFAMHQPGDLVTFLP 432
Q + + WG+ L+T+ +GLH W VRLD + GH+FLGV TR A+ +Y+G DR GWG + ++ L+H S++R YG S G TV + LNTD G LS G D D+G A LT G L+PA ++Q D VT +P
Sbjct: 856 QHTAKQWGMVLSTYACAPNTGLHEWAVRLDRCEK-GHVFLGVCTRDAAVSTYVGGDRQGWGLIGTRALWHNRSKVRGDYGDGFSTGSTVRIRLNTDTGALSFGLVDDDSDWGTAFDGLT---QYGALYPAIGLYQRDDQVTLVP 995 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111271.925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig111271.925.1 >prot_H-elongata_contig111271.925.1 ID=prot_H-elongata_contig111271.925.1|Name=mRNA_H-elongata_contig111271.925.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp QGSTRGWGVALATHGFPRGSGLHRWRVRLDSVNRRGHIFLGVATRQTALGback to top mRNA from alignment at H-elongata_contig111271:1248..1856- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig111271.925.1 ID=mRNA_H-elongata_contig111271.925.1|Name=mRNA_H-elongata_contig111271.925.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=609bp|location=Sequence derived from alignment at H-elongata_contig111271:1248..1856- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig111271:1248..1856- >mRNA_H-elongata_contig111271.925.1 ID=mRNA_H-elongata_contig111271.925.1|Name=mRNA_H-elongata_contig111271.925.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at H-elongata_contig111271:1248..1856- (Himanthalia elongata Himel1 dioecious)back to top |