prot_H-elongata_contig110695.884.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig110695.884.1
Unique Name	prot_H-elongata_contig110695.884.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	109

Homology

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: D8LBS0_ECTSI (eIF-5a domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS0_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 7.100e-70
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0

Query:    1 MATEDKLNDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLT 109
            MATEDKLNDYDFTG DAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTAT+IFTGKKLEDVIPSTHTTSVPVV RNEYQLLDISDDGFCSLLT
Sbjct:   39 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLT 147

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: A0A6H5KDL5_9PHAE (eIF-5a domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL5_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 3.980e-69
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0

Query:    1 MATEDKLNDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLT 109
            MATEDKLNDYDFTG DAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTAT+IFTGKKLEDVIPSTHTTSVPVV RNEYQLLDISDDGFCSLLT
Sbjct:   93 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLT 201

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: A0A835Z7R2_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R2_9STRA)

HSP 1 Score: 177 bits (448), Expect = 8.470e-55
Identity = 85/108 (78.70%), Postives = 96/108 (88.89%), Query Frame = 0

Query:    2 ATEDKLNDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLT 109
            AT++ LN+YDFT +DAGASHT P +AGQIRKGGYIVIKG PCKV NVSTSKTGKHGHAKANFTA +IFTGKKLED++P++H TSVP V R +YQLLDISDDGF SLLT
Sbjct:    6 ATDEALNNYDFTSSDAGASHTFPMDAGQIRKGGYIVIKGRPCKVANVSTSKTGKHGHAKANFTAIDIFTGKKLEDIVPTSHATSVPNVARVDYQLLDISDDGFLSLLT 113

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: A0A7S2UU65_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU65_9STRA)

HSP 1 Score: 163 bits (412), Expect = 2.170e-49
Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0

Query:    6 KLNDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLT 109
            KL+D+ F   ++GAS TIP EAGQIRKGG+IVIKG PCKVVNVSTSKTGKHGHAKANFTA +IFTGKK ED++P+THTTSVP V R EYQL+DISDDG+ SLLT
Sbjct:    7 KLDDFHFDTGESGASLTIPMEAGQIRKGGHIVIKGKPCKVVNVSTSKTGKHGHAKANFTAIDIFTGKKYEDIVPTTHTTSVPNVSRAEYQLIDISDDGYLSLLT 110

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: M4B4L4_HYAAE (Eukaryotic translation initiation factor 5A n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4B4L4_HYAAE)

HSP 1 Score: 160 bits (406), Expect = 1.610e-48
Identity = 79/108 (73.15%), Postives = 90/108 (83.33%), Query Frame = 0

Query:    1 MATEDKLNDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLL 108
            MA E++  D+ F   DAGAS T PSEAGQIRKGG+I+IKGHPCKVVN+STSKTGKHGHAK NFTA +IFT KK ED++PSTHTTSVP V R EY LLDI+DD FCSL+
Sbjct:    1 MAEEEQ--DFTFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNMSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFCSLM 106

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: A0A6A3TKK1_9STRA (Eukaryotic translation initiation factor 5A n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TKK1_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.180e-47
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 0

Query:    4 EDKLNDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLL 108
            E + +D++F   DAGAS T PSEAGQIRKGG+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA +IFT KK ED++PSTHTTSVP V R EY LLDI+DD F SL+
Sbjct:   20 EHEEHDFEFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFVSLM 124

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: K3WUI8_GLOUD (Eukaryotic translation initiation factor 5A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI8_GLOUD)

HSP 1 Score: 158 bits (400), Expect = 1.280e-47
Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 0

Query:    8 NDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLL 108
            +DY F   DAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA +IFT KKLED++PSTHTTSVP V R+EY LLDI+DD F SL+
Sbjct:    3 DDYTFESTDAGASDTFPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRSEYTLLDITDDDFLSLM 103

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: A0A024GN65_9STRA (Eukaryotic translation initiation factor 5A n=3 Tax=Albugo TaxID=65356 RepID=A0A024GN65_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.870e-47
Identity = 76/101 (75.25%), Postives = 84/101 (83.17%), Query Frame = 0

Query:    8 NDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLL 108
            +DY F   DAGAS T PSEAGQIRKGG+I+IK  PCKVVNVSTSKTGKHGHAK NFTA NIFT KKLED++PSTHTT VP V R EY LLDIS+DGF S++
Sbjct:    4 DDYSFASTDAGASDTYPSEAGQIRKGGFIMIKRQPCKVVNVSTSKTGKHGHAKCNFTALNIFTNKKLEDIVPSTHTTEVPFVSRKEYTLLDISEDGFVSIM 104

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: W7U6Y6_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Y6_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.990e-47
Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = 0

Query:    7 LNDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLL 108
            + DYDF+G  AGAS   PSEAGQI+KGGYI+IKG PCKVVNVSTSKTGKHGHAKANFTA +IF GKK+EDV+P+THTT VP V R+EYQLLDI +DGF SLL
Sbjct:    9 IEDYDFSGTTAGASDVFPSEAGQIKKGGYIMIKGRPCKVVNVSTSKTGKHGHAKANFTAIDIFNGKKVEDVVPTTHTTYVPNVNRSEYQLLDI-EDGFVSLL 109

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BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Match: A0A5D6XTX1_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX1_9STRA)

HSP 1 Score: 156 bits (395), Expect = 7.370e-47
Identity = 76/100 (76.00%), Postives = 84/100 (84.00%), Query Frame = 0

Query:    9 DYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLL 108
            DY F   DAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA +IFT KKLED++PSTHTTSVP V R EY LLDISDD F +L+
Sbjct:    5 DYTFESTDAGASDTYPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVARAEYTLLDISDDDFVTLM 104

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot

BLAST of mRNA_H-elongata_contig110695.884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBS0_ECTSI	7.100e-70	97.25	eIF-5a domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5KDL5_9PHAE	3.980e-69	97.25	eIF-5a domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A835Z7R2_9STRA	8.470e-55	78.70	Eukaryotic translation initiation factor 5A n=2 Ta...	[more]
A0A7S2UU65_9STRA	2.170e-49	76.92	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]
M4B4L4_HYAAE	1.610e-48	73.15	Eukaryotic translation initiation factor 5A n=18 T...	[more]
A0A6A3TKK1_9STRA	1.180e-47	73.33	Eukaryotic translation initiation factor 5A n=3 Ta...	[more]
K3WUI8_GLOUD	1.280e-47	75.25	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]
A0A024GN65_9STRA	1.870e-47	75.25	Eukaryotic translation initiation factor 5A n=3 Ta...	[more]
W7U6Y6_9STRA	1.990e-47	76.47	Eukaryotic translation initiation factor 5A n=2 Ta...	[more]
A0A5D6XTX1_9STRA	7.370e-47	76.00	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001884	Translation elongation factor IF5A-like	PIRSF	PIRSF003025	Transl_init_eIF5A	coord: 1..109 e-value: 1.4E-44 score: 149.3
IPR001884	Translation elongation factor IF5A-like	TIGRFAM	TIGR00037	TIGR00037	coord: 22..107 e-value: 2.1E-32 score: 109.7
IPR001884	Translation elongation factor IF5A-like	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A-RELATED	coord: 12..109
IPR013185	Translation elongation factor, KOW-like	PFAM	PF08207	EFP_N	coord: 27..80 e-value: 3.8E-6 score: 26.8
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 88..109 e-value: 4.6E-6 score: 26.6
None	No IPR available	GENE3D	2.40.50.140		coord: 89..109 e-value: 3.6E-5 score: 25.8
None	No IPR available	PANTHER	PTHR11673:SF32	EUKARYOTIC TRANSLATION INITIATION FACTOR 5A-2	coord: 12..109
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 4..88 e-value: 3.6E-36 score: 124.9
IPR019769	Translation elongation factor, IF5A, hypusine site	PROSITE	PS00302	IF5A_HYPUSINE	coord: 53..60
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 18..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig110695	contig	H-elongata_contig110695:1112..1781 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig110695.884.1	mRNA_H-elongata_contig110695.884.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig110695 1112..1781 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig110695.884.1 ID=prot_H-elongata_contig110695.884.1|Name=mRNA_H-elongata_contig110695.884.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
MATEDKLNDYDFTGADAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVST
SKTGKHGHAKANFTATNIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDIS
DDGFCSLLT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001884	IF5A-like
IPR013185	Transl_elong_KOW-like
IPR020189	Transl_elong_IF5A_C
IPR014722	Rib_L2_dom2
IPR019769	Trans_elong_IF5A_hypusine_site
IPR008991	Translation_prot_SH3-like_sf