mRNA_H-elongata_contig110556.874.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig110556.874.1
Unique NamemRNA_H-elongata_contig110556.874.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: D7FXY4_ECTSI (Repressor of RNA polymerase III transcription n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY4_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 5.980e-79
Identity = 131/195 (67.18%), Postives = 137/195 (70.26%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYG------------------------------------LSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHNKIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHCTTK 477
            KKAGDDKRLSKELER +   + T   S                                         S SFG LT+ GVRRTLVDLICTMNASFPD+DFSGVRPD F KE SVSLVRN+VNAALAEVSVIHNKIFLESFWADLDEVM LKDCEVY+YSPD EGDPFTEGCLWSFNHFFLNK LKRVLFLHCTTK
Sbjct:   36 KKAGDDKRLSKELERQLSASLPTPSRSSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKVNAALAEVSVIHNKIFLESFWADLDEVMTLKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNKNLKRVLFLHCTTK 230          
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: A0A7S2B0Q0_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B0Q0_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.550e-52
Identity = 86/156 (55.13%), Postives = 112/156 (71.79%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYGLSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHNKIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHC 468
            K+AG+DKRLSK LE+   ++++ SP + G   S   G L++ G RR L+DLI TMNASFPDHDFS VRP+ F KE  VSLV + +N  LAE+S  +N  FLE  W  ++EV+KLK+CE+Y+Y PD E DPF+EG LW+FN FF NK LKR+L+  C
Sbjct:   36 KRAGEDKRLSKMLEQQYVDELACSPTALG---SSPLGPLSDSGTRRLLIDLISTMNASFPDHDFSSVRPEQFLKEQHVSLVMSNINMHLAELSETYNSSFLEELWMSIEEVVKLKECEIYSYVPDMEEDPFSEGNLWTFNFFFFNKNLKRILYFTC 188          
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: A0A7R9U9D7_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9D7_9STRA)

HSP 1 Score: 162 bits (409), Expect = 5.090e-47
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYGLSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIH--------NKIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHCTTK 477
            K+AGDDKRLS++L+R +K++++TSP S    A    G L+E   R  L+DLI TMNASFPD+DFS +RP+ F KE  +S V N +N  LA V             K FL   W  ++++++L++CEVY Y PD +GDPF+EG LWSFN+FF NKALKR++F  C  +
Sbjct:   36 KRAGDDKRLSRKLDRQLKQELATSPKS---PAESPLGPLSESSTRNLLIDLIITMNASFPDYDFSSLRPEQFLKESHLSFVVNDINTHLAHVDEFRIEGLTSGTEKKFLVDVWRTVEDIIRLRECEVYRYIPDLDGDPFSEGTLWSFNYFFFNKALKRIIFFTCIAR 199          
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: F0YN32_AURAN (Repressor of RNA polymerase III transcription n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN32_AURAN)

HSP 1 Score: 152 bits (385), Expect = 1.390e-43
Identity = 75/159 (47.17%), Postives = 105/159 (66.04%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYGLSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHNKIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHCTTK 477
            K+AGDDK+LSK+LE+   +++++SP S  L  +   G L+    RR L+DLI TMNASFPDHDFS +RP+ F +E S   V       L+E+S       L+  WA ++E + LKDCEV++Y PD + DPF+EG LWSFN+FF NK LKR+++  C  +
Sbjct:   36 KRAGDDKKLSKQLEKQYADELTSSPGS--LDTTSPLGVLSASSTRRLLIDLISTMNASFPDHDFSALRPEQFCREASADFVARSCTRYLSEISD-QGFDLLQELWAAVEEAVSLKDCEVFSYVPDLDSDPFSEGALWSFNYFFFNKTLKRIVYFSCVAR 191          
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: A0A8J2SMK1_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMK1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.400e-43
Identity = 76/165 (46.06%), Postives = 104/165 (63.03%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYGLSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHN------KIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHCTTK 477
            K+AG+DK+L+KELE     +   SP+S  + AS   G L +P  RR LVDLI T+NASFPDHDFS +RP+ F +E             LAE++            FL+  WA ++E ++L++CEVY+Y PD E DPF+EG LWSFN+FF NK LKR+++L C  +
Sbjct:   36 KRAGEDKKLAKELEAQFAAESRNSPSS--MEASSPLGALAQPATRRLLVDLIATLNASFPDHDFSNLRPEQFCREAGAQFAVRACARHLAELATAERFRAPGGGEFLDELWAAIEEAIQLRECEVYSYVPDGESDPFSEGALWSFNYFFFNKRLKRIVYLSCVAR 198          
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: H3GX22_PHYRM (Repressor of RNA polymerase III transcription n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3GX22_PHYRM)

HSP 1 Score: 151 bits (381), Expect = 6.250e-43
Identity = 75/159 (47.17%), Postives = 102/159 (64.15%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYGLSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHNKIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHCTTK 477
            KKAG DKRL+K LE + +++M    A+  L  S   G L  P  R+ L++LI TMNASFPD+DFS V+P+ F+KEP   +   RVN  LAE+       F+E  W  + E +KL +CEVY+Y PD + DPF++G LWSFN+FF NK  K++L+  C  K
Sbjct:   36 KKAGSDKRLAKSLELYYQQEME---AAADLLGSSPLGPLAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRVNHDLAELLEAEGNGFVEKMWEGIAEAIKLDECEVYSYIPDMDADPFSDGNLWSFNYFFYNKVQKKILYFTCICK 191          
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: A0A3F2RKD6_9STRA (Repressor of RNA polymerase III transcription n=15 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RKD6_9STRA)

HSP 1 Score: 149 bits (375), Expect = 5.160e-42
Identity = 72/159 (45.28%), Postives = 103/159 (64.78%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYGLSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHNKIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHCTTK 477
            K+AG DKRL+K LE + ++++  S A   L  S   G +  P  R+ L++LI TMNASFPD+DFS V+P+ F+KEP   +  +R+N  LAE+       F+E  W  + E +KL +CEVY+Y PD + DPF++G LWSFN+FF NK  K++L+  C  K
Sbjct:   36 KRAGSDKRLAKSLELYYQQEIEASAAD--LLGSSPLGPIAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALHRINHDLAEMLEAEGNGFVEKMWEAIAEAIKLDECEVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKILYFTCICK 192          
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: A0A5D6YCZ0_9STRA (Repressor of RNA polymerase III transcription n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6YCZ0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.770e-41
Identity = 72/162 (44.44%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYG---LSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHNKIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHCTTK 477
            KKAG DK+L+K LE + ++++    A+     L +S   G L  P  R+ L++LI TMNASFPD+DFS V+P+ F+KEP   L   R+N  LAE+    +  F+E  W  + E +KL++CEVY+Y PD + DPF++G LWSFN+FF N+  K++L+  C +K
Sbjct:   36 KKAGSDKKLAKHLELYYQQELEALAAAKDAQELLSSSPLGPLAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDYRLAIQRINHDLAELIDAESNGFVEKMWEAIAETIKLEECEVYSYIPDMDSDPFSDGTLWSFNYFFYNRNQKKILYFTCMSK 197          
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: A0A6A4CZA8_9STRA (Repressor of RNA polymerase III transcription n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CZA8_9STRA)

HSP 1 Score: 146 bits (369), Expect = 4.140e-41
Identity = 73/159 (45.91%), Postives = 99/159 (62.26%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYGLSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHNKIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHCTTK 477
            KKAG DKRL+K LE   ++++    A   L  S   G +  P  R+ L+ LI TMNASFPD+DFS  RP+ F+KEP   +   R+N  LAE+       F+E  W D+ + +KL DC+VY+Y PD + DPF++G LWSFN+FF NK  K+VL+  C  K
Sbjct:   36 KKAGSDKRLAKSLELLYQQEIEA--ADVQLLGSSPLGPIAAPATRKLLITLISTMNASFPDYDFSAARPEQFRKEPDFRIALQRINHDLAELLESEGGGFVEKMWEDIADAIKLDDCDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCK 192          
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Match: A0A6G0R7A1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0R7A1_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.520e-40
Identity = 73/159 (45.91%), Postives = 100/159 (62.89%), Query Frame = 1
Query:    1 KKAGDDKRLSKELERHMKEKMSTSPASYGLSASKSFGELTEPGVRRTLVDLICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHNKIFLESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKRVLFLHCTTK 477
            KKAG DKRL+K LE   ++++  + A   L  S   G +  P  R+ L+ LI TMNASFPD+DFS  RP+ F+KEP   +   R+N  LAE+       F+E  W D+ + +KL DC+VY+Y PD + DPF++G LWSFN+FF NK  K+VL+  C  K
Sbjct:   36 KKAGSDKRLAKSLELLYQQEIEAADAQ--LLGSSPLGPIAAPATRKLLITLISTMNASFPDYDFSAARPEQFRKEPDFRIALQRINHDLAELLESEGGGFVEKMWEDIADAIKLDDCDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCK 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110556.874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXY4_ECTSI5.980e-7967.18Repressor of RNA polymerase III transcription n=2 ... [more]
A0A7S2B0Q0_9STRA2.550e-5255.13Repressor of RNA polymerase III transcription n=1 ... [more]
A0A7R9U9D7_9STRA5.090e-4748.50Repressor of RNA polymerase III transcription n=1 ... [more]
F0YN32_AURAN1.390e-4347.17Repressor of RNA polymerase III transcription n=1 ... [more]
A0A8J2SMK1_9STRA2.400e-4346.06Repressor of RNA polymerase III transcription n=1 ... [more]
H3GX22_PHYRM6.250e-4347.17Repressor of RNA polymerase III transcription n=25... [more]
A0A3F2RKD6_9STRA5.160e-4245.28Repressor of RNA polymerase III transcription n=15... [more]
A0A5D6YCZ0_9STRA1.770e-4144.44Repressor of RNA polymerase III transcription n=2 ... [more]
A0A6A4CZA8_9STRA4.140e-4145.91Repressor of RNA polymerase III transcription n=2 ... [more]
A0A6G0R7A1_9STRA1.520e-4045.91Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110556contigH-elongata_contig110556:804..2049 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score245.4
Seed ortholog evalue1.9e-62
Seed eggNOG ortholog2880.D7FXY4
Preferred nameMAF1
KEGG koko:K12394
KEGG Pathwayko04142,map04142
GOsGO:0000122,GO:0000182,GO:0000994,GO:0001016,GO:0001030,GO:0001031,GO:0001032,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005886,GO:0006325,GO:0006342,GO:0006355,GO:0006357,GO:0006359,GO:0006996,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016043,GO:0016458,GO:0016480,GO:0019219,GO:0019222,GO:0019899,GO:0030424,GO:0030425,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0036477,GO:0040029,GO:0042995,GO:0043005,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044212,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045202,GO:0045814,GO:0045892,GO:0045934,GO:0048471,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050811,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060077,GO:0060255,GO:0061587,GO:0065007,GO:0070013,GO:0070063,GO:0071840,GO:0071944,GO:0080084,GO:0080090,GO:0097159,GO:0097447,GO:0097458,GO:0120025,GO:0120038,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.RNA polymerase III core binding
EggNOG OGsCOG5046@1,KOG3104@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRepressor of RNA polymerase III transcription Maf1
Ec32 orthologEc-19_002040.1
Exons3
Model size483
Cds size483
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110556.874.1prot_H-elongata_contig110556.874.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig110556 804..2049 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929632.7387178-CDS-H-elongata_contig110556:803..9321622929632.7387178-CDS-H-elongata_contig110556:803..932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig110556 804..932 -
1691679099.1670787-CDS-H-elongata_contig110556:803..9321691679099.1670787-CDS-H-elongata_contig110556:803..932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig110556 804..932 -
1622929632.7566433-CDS-H-elongata_contig110556:1433..15351622929632.7566433-CDS-H-elongata_contig110556:1433..1535Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig110556 1434..1535 -
1691679099.1792536-CDS-H-elongata_contig110556:1433..15351691679099.1792536-CDS-H-elongata_contig110556:1433..1535Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig110556 1434..1535 -
1622929632.7683978-CDS-H-elongata_contig110556:1797..20491622929632.7683978-CDS-H-elongata_contig110556:1797..2049Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig110556 1798..2049 -
1691679099.1888485-CDS-H-elongata_contig110556:1797..20491691679099.1888485-CDS-H-elongata_contig110556:1797..2049Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig110556 1798..2049 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig110556.874.1

>prot_H-elongata_contig110556.874.1 ID=prot_H-elongata_contig110556.874.1|Name=mRNA_H-elongata_contig110556.874.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
KKAGDDKRLSKELERHMKEKMSTSPASYGLSASKSFGELTEPGVRRTLVD
LICTMNASFPDHDFSGVRPDHFQKEPSVSLVRNRVNAALAEVSVIHNKIF
LESFWADLDEVMKLKDCEVYTYSPDNEGDPFTEGCLWSFNHFFLNKALKR
VLFLHCTTKR*
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mRNA from alignment at H-elongata_contig110556:804..2049-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig110556.874.1 ID=mRNA_H-elongata_contig110556.874.1|Name=mRNA_H-elongata_contig110556.874.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1246bp|location=Sequence derived from alignment at H-elongata_contig110556:804..2049- (Himanthalia elongata Himel1 dioecious)
AAAAAGGCTGGCGACGATAAGCGCCTCTCGAAGGAGCTGGAGCGGCACAT GAAGGAGAAGATGAGTACCTCTCCGGCGTCCTATGGCTTAAGTGCCTCCA AGAGCTTCGGCGAGCTGACCGAACCGGGGGTCCGGAGGACCTTAGTGGAC CTGATCTGCACCATGAACGCCTCTTTCCCGGACCACGACTTCAGCGGCGT CCGGCCGGATCACTTCCAGAAGGAGCCCAGCGTCAGCCTCGTCCGAAATA GGGTGAGAGGAGGGAGTGAGAGGGGGAAACGAGGGGGACGGACGGACGGA CGGCTTAAATGAAAGGTGAACATTACATTCCACGGTTCTATAGTAGTGTA TGTAGAAATAAAGAGATAATATACCTCTGTTTTCGTGGGTCCAAAATGAC CATCTATGCTATCTATTAAAAAAGCACACAAGACACGCACATACCGACAC ACATAACGCTAAGATAGGGCAAAAATGATCTGTCGAAGCTCCTTTTTGTT TCGGGGTGTTCCAGGTGAACGCGGCGTTGGCGGAGGTCTCGGTGATCCAC AACAAGATATTCCTCGAAAGTTTCTGGGCTGACCTGGACGAGGTGATGAA GCTCAAGGACTGCGAGGTGAGGAATCGGCCTCGAACACCGTGTCGCTAAG TCACACGGTGTAACGCTTTAGTGCAGGATGCGATGAGTGGTAGTGGTATC GAAAGGTGTGCTGTTGGGAAGGGGACGTTCTTATATTTTTCTTAAGATAA AATAAGTCTGGCTCTCAGCGATGCTAAGTCTGACACGACACGCCATGTCG AGCCAAATATAAGCTTATTCATACAAACAAACTTGGTACTCTATGACTAT TATGGAAAACATAATCCAGATCGTGAACCTGAACCGCTGCTTGATTGCGT CGCTTCGACGATGTCTTTGGTACTGACCTATGGGTTGGGTTGGGATGGGA TGAGATGGGATGACCCGTCAGGCGTTTTTCTTAGGGTGCTGGCTGAATCA TGAAAAAAAAAGCTCCTTTTCGATTTTTTAGTATTAATAATAATAATATT CCACAATAGTTGTTATATTTTTATTTACCACACATACGCACACGCACACG CACGCTCCTAAACGCAGGTCTACACATACTCGCCAGACAATGAGGGGGAT CCCTTCACCGAAGGGTGCCTGTGGTCGTTCAATCACTTCTTCCTCAACAA GGCGCTGAAGCGAGTTCTGTTCCTCCACTGCACGACGAAGAGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig110556:804..2049-

>mRNA_H-elongata_contig110556.874.1 ID=mRNA_H-elongata_contig110556.874.1|Name=mRNA_H-elongata_contig110556.874.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at H-elongata_contig110556:804..2049- (Himanthalia elongata Himel1 dioecious)
AAAAAGGCTGGCGACGATAAGCGCCTCTCGAAGGAGCTGGAGCGGCACAT
GAAGGAGAAGATGAGTACCTCTCCGGCGTCCTATGGCTTAAGTGCCTCCA
AGAGCTTCGGCGAGCTGACCGAACCGGGGGTCCGGAGGACCTTAGTGGAC
CTGATCTGCACCATGAACGCCTCTTTCCCGGACCACGACTTCAGCGGCGT
CCGGCCGGATCACTTCCAGAAGGAGCCCAGCGTCAGCCTCGTCCGAAATA
GGAAAAAGGCTGGCGACGATAAGCGCCTCTCGAAGGAGCTGGAGCGGCAC
ATGAAGGAGAAGATGAGTACCTCTCCGGCGTCCTATGGCTTAAGTGCCTC
CAAGAGCTTCGGCGAGCTGACCGAACCGGGGGTCCGGAGGACCTTAGTGG
ACCTGATCTGCACCATGAACGCCTCTTTCCCGGACCACGACTTCAGCGGC
GTCCGGCCGGATCACTTCCAGAAGGAGCCCAGCGTCAGCCTCGTCCGAAA
TAGGGTGAACGCGGCGTTGGCGGAGGTCTCGGTGATCCACAACAAGATAT
TCCTCGAAAGTTTCTGGGCTGACCTGGACGAGGTGATGAAGCTCAAGGAC
TGCGAGGTGAACGCGGCGTTGGCGGAGGTCTCGGTGATCCACAACAAGAT
ATTCCTCGAAAGTTTCTGGGCTGACCTGGACGAGGTGATGAAGCTCAAGG
ACTGCGAGGTCTACACATACTCGCCAGACAATGAGGGGGATCCCTTCACC
GAAGGGTGCCTGTGGTCGTTCAATCACTTCTTCCTCAACAAGGCGCTGAA
GCGAGTTCTGTTCCTCCACTGCACGACGAAGAGGTGAGTCTACACATACT
CGCCAGACAATGAGGGGGATCCCTTCACCGAAGGGTGCCTGTGGTCGTTC
AATCACTTCTTCCTCAACAAGGCGCTGAAGCGAGTTCTGTTCCTCCACTG
CACGACGAAGAGGTGA
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