mRNA_H-elongata_contig109298.754.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: D7FHI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI4_ECTSI) HSP 1 Score: 127 bits (320), Expect = 2.640e-33 Identity = 66/100 (66.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 1 ILTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELGGVSNKPTRRVLI--FSGHILS-SGASEVCLTDGDNQSLRLAQGNVEANI 291
+L QAWK GKGGTDIGFGASVYPAAYVLAEYLERHP+LVRGKRVIELGG P R L H ++ GA+EVCLTDGD +SL+L Q NV N+
Sbjct: 29 LLKIQQAWKGDGKGGTDIGFGASVYPAAYVLAEYLERHPYLVRGKRVIELGGCCAIPARAALFAALQYHCMTFKGAAEVCLTDGDEESLKLTQRNVTDNL 128
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: A0A6H5KX94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX94_9PHAE) HSP 1 Score: 119 bits (298), Expect = 3.320e-30 Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 1 ILTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELGGVSNKPTRRVLIFSGHILSS-GASEVCLTDGDNQSLRLAQGNVEANI 291
+L QAWK GKGGTDIGFGASVYPAAYVLAEYLERHP+LVRGKRVIELG + F G ++ GA+EVCLTDGD +SL+L Q NV N+
Sbjct: 29 LLKIQQAWKGDGKGGTDIGFGASVYPAAYVLAEYLERHPYLVRGKRVIELGTGTG--------FLGIAAATLGAAEVCLTDGDEESLKLTQRNVTGNL 118
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: A0A8K1C253_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C253_PYTOL) HSP 1 Score: 78.6 bits (192), Expect = 1.510e-15 Identity = 46/95 (48.42%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 4 LTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELGGVSNKPTRRVLIFSGHILSSGASEVCLTDGDNQSLRLAQGNVEAN 288
+ Q WK GKGGT +GFGASVY AA L+ YLE H LVR KRVIELG V I + H+ A +V +TDGD S+ L N+E N
Sbjct: 56 IMIRQGWKNDGKGGTTLGFGASVYDAAIALSLYLEAHCDLVRNKRVIELGCGPGL----VGIVAAHLQ---ADQVVVTDGDPASVHLTAANIELN 143
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: A0A5D6Y5E6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5E6_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.860e-15 Identity = 48/94 (51.06%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 16 QAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELG---GVSNKPTRRVLIFSGHILSSGASEVCLTDGDNQSLRLAQGNVEAN 288
Q W+ G+GGT +GFGASVY A+ LA +LE H H VRG+RVIELG G++ I +G + GAS V LTDGD S+ LA+ NVE N
Sbjct: 692 QGWRADGRGGTRLGFGASVYDASVALALFLESHDHHVRGRRVIELGCGPGLAG-------IAAGVL---GASSVLLTDGDAGSVELAKRNVELN 775
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: W2NJ79_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2NJ79_PHYPR) HSP 1 Score: 77.4 bits (189), Expect = 4.370e-15 Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 4 LTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELGGVSNKPTRRVLIFSGHILSSGASEVCLTDGDNQSLRLAQGNVEAN 288
+ QAW+ G+GGT +GFGASVY AA L+ YL HP LV+GKRV+ELG V + + H+ + +TDGD S+ L Q N+E N
Sbjct: 59 IRIDQAWQSDGRGGTTLGFGASVYDAAIALSLYLAAHPDLVKGKRVVELGCGPGL----VGVVAAHLQPKS---IVVTDGDPASVALTQHNIEVN 146
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: M4B6W0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6W0_HYAAE) HSP 1 Score: 77.0 bits (188), Expect = 5.160e-15 Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 4 LTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELGGVSNKPTRRVLIFSGHILSSGASEVCLTDGDNQSLRLAQGNVEAN 288
+ QAW+ G+GGT +GFGASVY AA L+ YL H LV GKR+IELGG V + + H+ G + +TDGD S+ L + N+E N
Sbjct: 44 IRIDQAWQNDGRGGTALGFGASVYDAAIALSLYLASHRDLVEGKRIIELGGGPGL----VGVVAAHLKPKG---IVITDGDPASVALTRRNIELN 131
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: A0A329SNI9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SNI9_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 8.980e-15 Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 4 LTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELGGVSNKPTRRVLIFSGHILSSGASEVCLTDGDNQSLRLAQGNVEAN 288
+ QAW+ G+GGT +GFGASVY AA L+ YL HP LV+G RVIELG V + +GH+ + +TDGD S+ L Q N++ N
Sbjct: 62 IRIDQAWQSDGRGGTALGFGASVYDAAIALSLYLAAHPDLVKGNRVIELGCGPGL----VGVVAGHL---EPKSIVITDGDPASVALTQRNIKVN 149
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: A0A833WCW8_PHYIN (Lysine methyltransferase n=3 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WCW8_PHYIN) HSP 1 Score: 76.6 bits (187), Expect = 9.100e-15 Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 4 LTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELGGVSNKPTRRVLIFSGHILSSGASEVCLTDGDNQSLRLAQGNVEAN 288
+ QAW+ G+GGT +GFGASVY AA L+ YL HP L++G RVIELG V + + H+ + +TDGD+ S+ L Q N++AN
Sbjct: 64 IRIDQAWQSDGRGGTSLGFGASVYDAAIALSLYLASHPDLIKGGRVIELGCGPGL----VGVVAAHL---EPKSIVITDGDSASVALTQRNIKAN 151
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: A0A484DR85_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DR85_BRELC) HSP 1 Score: 76.3 bits (186), Expect = 1.270e-14 Identity = 43/95 (45.26%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 4 LTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELGGVSNKPTRRVLIFSGHILSSGASEVCLTDGDNQSLRLAQGNVEAN 288
+ QAW+ G+GGT +GFGASVY AA L+ Y+ HPHLV+GKRVIELG V I + H V +TDGD S+ L + N+ N
Sbjct: 56 IRIDQAWQSDGRGGTALGFGASVYDAAIALSLYIADHPHLVKGKRVIELGCGPGL----VGIVAAHF---EPKHVVITDGDPASVALTRHNIRLN 143
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Match: A0A2D4CGG4_PYTIN (Uncharacterized protein (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGG4_PYTIN) HSP 1 Score: 75.5 bits (184), Expect = 1.350e-14 Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 4 LTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELGGVSNKPTRRVLIFSGHILSSGASEVCLTDGDNQSLRLAQGNVEAN 288
+ QAW+ GKGGT IGFGASVY AA L+ +L+ H LV+GKRVIELG V I + H+ A+ V +TDGD+ S+ L N+ N
Sbjct: 48 ILIQQAWQPDGKGGTAIGFGASVYDAAIALSLFLDSHRDLVQGKRVIELGCGPGL----VGIVAAHL---NAASVLVTDGDDASVALTATNISRN 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109298.754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109298.754.1 >prot_H-elongata_contig109298.754.1 ID=prot_H-elongata_contig109298.754.1|Name=mRNA_H-elongata_contig109298.754.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp ILTFHQAWKEGGKGGTDIGFGASVYPAAYVLAEYLERHPHLVRGKRVIELback to top mRNA from alignment at H-elongata_contig109298:189..1625- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109298.754.1 ID=mRNA_H-elongata_contig109298.754.1|Name=mRNA_H-elongata_contig109298.754.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1437bp|location=Sequence derived from alignment at H-elongata_contig109298:189..1625- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109298:189..1625- >mRNA_H-elongata_contig109298.754.1 ID=mRNA_H-elongata_contig109298.754.1|Name=mRNA_H-elongata_contig109298.754.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=582bp|location=Sequence derived from alignment at H-elongata_contig109298:189..1625- (Himanthalia elongata Himel1 dioecious)back to top |